FFCP PHASE1:Mm9::chr14:70862708..70862711,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:70862708..70862711,+|id=chr14:70862708..70862711,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,6.91e-09,3;CL:0000359,6.91e-09,3;CL:0002539,6.91e-09,3;CL:0000514,6.91e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.99e-26!50;UBERON:0006238!2.99e-26!50;UBERON:0002616!1.92e-25!49;UBERON:0003080!1.35e-23!40;UBERON:0001049!2.28e-23!52;UBERON:0005068!2.28e-23!52;UBERON:0006241!2.28e-23!52;UBERON:0007135!2.28e-23!52;UBERON:0002780!5.91e-23!39;UBERON:0001890!5.91e-23!39;UBERON:0006240!5.91e-23!39;UBERON:0001017!8.79e-19!73;UBERON:0005743!8.79e-19!73;UBERON:0002791!2.57e-18!29;UBERON:0003528!2.57e-18!29;UBERON:0001893!2.57e-18!29;UBERON:0000033!5.48e-18!63;UBERON:0000073!9.64e-18!75;UBERON:0001016!9.64e-18!75;UBERON:0003056!1.88e-17!49;UBERON:0002346!7.43e-17!71;UBERON:0003075!7.43e-17!71;UBERON:0007284!7.43e-17!71;UBERON:0002020!4.49e-15!34;UBERON:0000956!1.87e-14!21;UBERON:0001869!1.87e-14!21;UBERON:0000203!1.87e-14!21;UBERON:0002619!3.69e-12!17;UBERON:0004121!5.82e-12!102;UBERON:0000924!5.82e-12!102;UBERON:0006601!5.82e-12!102;UBERON:0000025!3.64e-10!114;UBERON:0002021!7.60e-10!10;UBERON:0000411!7.60e-10!10;UBERON:0001950!7.60e-10!10;UBERON:0007811!1.08e-09!86;UBERON:0000153!2.63e-09!94;UBERON:0004111!9.88e-09!122|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.40e-35,47;UBERON:0006238,1.40e-35,47;UBERON:0002616,1.13e-33,46;UBERON:0002780,7.42e-31,39;UBERON:0001890,7.42e-31,39;UBERON:0006240,7.42e-31,39;UBERON:0003080,5.91e-30,40;UBERON:0001049,3.93e-29,52;UBERON:0005068,3.93e-29,52;UBERON:0006241,3.93e-29,52;UBERON:0007135,3.93e-29,52;UBERON:0000073,7.66e-28,54;UBERON:0003528,6.18e-26,29;UBERON:0002791,6.18e-26,29;UBERON:0001893,6.18e-26,29;UBERON:0002021,1.41e-25,10;UBERON:0000411,1.41e-25,10;UBERON:0001950,1.41e-25,10;UBERON:0003056,1.69e-23,49;UBERON:0001017,1.17e-22,73;UBERON:0002346,1.34e-22,64;UBERON:0003075,1.34e-22,64;UBERON:0007284,1.34e-22,64;UBERON:0000956,2.14e-22,21;UBERON:0001869,2.14e-22,21;UBERON:0000203,2.14e-22,21;UBERON:0001016,6.78e-22,75;UBERON:0002020,1.66e-21,34;UBERON:0002619,8.20e-21,17;UBERON:0010371,4.15e-19,73;UBERON:0004121,5.08e-16,95;UBERON:0000924,5.08e-16,95;UBERON:0006601,5.08e-16,95;UBERON:0010314,5.59e-14,92;UBERON:0000025,9.12e-14,114;UBERON:0004111,1.86e-12,122;UBERON:0001135,6.91e-09,3;UBERON:0004237,6.91e-09,3;UBERON:0004695,6.91e-09,3;UBERON:0002111,6.91e-09,3;UBERON:0004178,6.91e-09,3;UBERON:0000483,7.18e-07,174;UBERON:0002037,8.30e-07,4;UBERON:0002680,8.30e-07,4;UBERON:0001895,8.30e-07,4;UBERON:0010092,8.30e-07,4;UBERON:0006215,8.30e-07,4;UBERON:0000947,9.49e-07,4;UBERON:0001637,9.49e-07,4;UBERON:0004573,9.49e-07,4;UBERON:0003509,9.49e-07,4;UBERON:0004571,9.49e-07,4;UBERON:0010191,9.49e-07,4;UBERON:0004572,9.49e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.23029248682932,3.67093504323363,0,1.09012578190223,0.878744730937887,0.777719596297134,0.139986421625363,0,0,0,0,0,0.85960031981627,0,0,0,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,0.311068836925433,0.270011876663381,1.05162480675691,0.285650984403804,0,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.823388792421687,1.04182674111352,1.67509799400829,0,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,24.0080253549469,18.850203613211,0,0,0,0,0.748953197024114,1.83000241127451,2.26177833803156,2.9550134432687,2.81287003063364,0.20778804455956,2.10913641988085,0.101839363850316,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,2.3131894342054,2.36680608472354,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,0,0,0.659880491890142,1.32745138339963,0,0,0.377210159511796,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0,0.129358683782755,0.857348140126369,1.24138163549592,1.24858172321449,1.64549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.915758121336325,0.214368379079066,0,5.0827665835536,2.30162618253588,2.86447756719698,1.20297227640581,4.7955776383945,1.5107877947794,2.70009000092722,4.05289082901798,1.81256963593682,1.55328093525546,0,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0,0.888986911206461,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0,0,0.154936841185966,0.192906610981141,0.999242311751784,1.16965804222704,0.214871054048298,0,0.441182838239031,0.231867835620421|short_description=p@chr14:70862708..70862711,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:70862708..70862711,+ | |||
|description=CAGE_peak_at_chr14:70862708..70862711,+ | |||
|id=chr14:70862708..70862711,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.91e-09,3;CL:0000359,6.91e-09,3;CL:0002539,6.91e-09,3;CL:0000514,6.91e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.99e-26!50;UBERON:0006238!2.99e-26!50;UBERON:0002616!1.92e-25!49;UBERON:0003080!1.35e-23!40;UBERON:0001049!2.28e-23!52;UBERON:0005068!2.28e-23!52;UBERON:0006241!2.28e-23!52;UBERON:0007135!2.28e-23!52;UBERON:0002780!5.91e-23!39;UBERON:0001890!5.91e-23!39;UBERON:0006240!5.91e-23!39;UBERON:0001017!8.79e-19!73;UBERON:0005743!8.79e-19!73;UBERON:0002791!2.57e-18!29;UBERON:0003528!2.57e-18!29;UBERON:0001893!2.57e-18!29;UBERON:0000033!5.48e-18!63;UBERON:0000073!9.64e-18!75;UBERON:0001016!9.64e-18!75;UBERON:0003056!1.88e-17!49;UBERON:0002346!7.43e-17!71;UBERON:0003075!7.43e-17!71;UBERON:0007284!7.43e-17!71;UBERON:0002020!4.49e-15!34;UBERON:0000956!1.87e-14!21;UBERON:0001869!1.87e-14!21;UBERON:0000203!1.87e-14!21;UBERON:0002619!3.69e-12!17;UBERON:0004121!5.82e-12!102;UBERON:0000924!5.82e-12!102;UBERON:0006601!5.82e-12!102;UBERON:0000025!3.64e-10!114;UBERON:0002021!7.60e-10!10;UBERON:0000411!7.60e-10!10;UBERON:0001950!7.60e-10!10;UBERON:0007811!1.08e-09!86;UBERON:0000153!2.63e-09!94;UBERON:0004111!9.88e-09!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.40e-35,47;UBERON:0006238,1.40e-35,47;UBERON:0002616,1.13e-33,46;UBERON:0002780,7.42e-31,39;UBERON:0001890,7.42e-31,39;UBERON:0006240,7.42e-31,39;UBERON:0003080,5.91e-30,40;UBERON:0001049,3.93e-29,52;UBERON:0005068,3.93e-29,52;UBERON:0006241,3.93e-29,52;UBERON:0007135,3.93e-29,52;UBERON:0000073,7.66e-28,54;UBERON:0003528,6.18e-26,29;UBERON:0002791,6.18e-26,29;UBERON:0001893,6.18e-26,29;UBERON:0002021,1.41e-25,10;UBERON:0000411,1.41e-25,10;UBERON:0001950,1.41e-25,10;UBERON:0003056,1.69e-23,49;UBERON:0001017,1.17e-22,73;UBERON:0002346,1.34e-22,64;UBERON:0003075,1.34e-22,64;UBERON:0007284,1.34e-22,64;UBERON:0000956,2.14e-22,21;UBERON:0001869,2.14e-22,21;UBERON:0000203,2.14e-22,21;UBERON:0001016,6.78e-22,75;UBERON:0002020,1.66e-21,34;UBERON:0002619,8.20e-21,17;UBERON:0010371,4.15e-19,73;UBERON:0004121,5.08e-16,95;UBERON:0000924,5.08e-16,95;UBERON:0006601,5.08e-16,95;UBERON:0010314,5.59e-14,92;UBERON:0000025,9.12e-14,114;UBERON:0004111,1.86e-12,122;UBERON:0001135,6.91e-09,3;UBERON:0004237,6.91e-09,3;UBERON:0004695,6.91e-09,3;UBERON:0002111,6.91e-09,3;UBERON:0004178,6.91e-09,3;UBERON:0000483,7.18e-07,174;UBERON:0002037,8.30e-07,4;UBERON:0002680,8.30e-07,4;UBERON:0001895,8.30e-07,4;UBERON:0010092,8.30e-07,4;UBERON:0006215,8.30e-07,4;UBERON:0000947,9.49e-07,4;UBERON:0001637,9.49e-07,4;UBERON:0004573,9.49e-07,4;UBERON:0003509,9.49e-07,4;UBERON:0004571,9.49e-07,4;UBERON:0010191,9.49e-07,4;UBERON:0004572,9.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,2.23029248682932,3.67093504323363,0,1.09012578190223,0.878744730937887,0.777719596297134,0.139986421625363,0,0,0,0,0,0.85960031981627,0,0,0,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,0.311068836925433,0.270011876663381,1.05162480675691,0.285650984403804,0,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.823388792421687,1.04182674111352,1.67509799400829,0,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,24.0080253549469,18.850203613211,0,0,0,0,0.748953197024114,1.83000241127451,2.26177833803156,2.9550134432687,2.81287003063364,0.20778804455956,2.10913641988085,0.101839363850316,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,2.3131894342054,2.36680608472354,0,0,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0.425820255624806,0,0,0.659880491890142,1.32745138339963,0,0,0.377210159511796,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0,0.129358683782755,0.857348140126369,1.24138163549592,1.24858172321449,1.64549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.915758121336325,0.214368379079066,0,5.0827665835536,2.30162618253588,2.86447756719698,1.20297227640581,4.7955776383945,1.5107877947794,2.70009000092722,4.05289082901798,1.81256963593682,1.55328093525546,0,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0,0.888986911206461,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0,0,0.154936841185966,0.192906610981141,0.999242311751784,1.16965804222704,0.214871054048298,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr14:70862708..70862711,+ | |||
}} |
Latest revision as of 18:14, 4 August 2015
Short description: | p@chr14:70862708..70862711, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:70862708..70862711, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.91e-09 | 3 |
vascular associated smooth muscle cell | 6.91e-09 | 3 |
aortic smooth muscle cell | 6.91e-09 | 3 |
smooth muscle myoblast | 6.91e-09 | 3 |