FFCP PHASE2:Hg19::chr13:31191642..31191749,-
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| Short description: | p2@HMGB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HMGB1_5end |
| Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
| Association with transcript: | 0bp_to_ENST00000405805_5end |
| EntrezGene: | HMGB1 |
| HGNC: | 4983 |
| UniProt: | P09429 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@HMGB1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 7.65e-27 | 136 |
| hematopoietic lineage restricted progenitor cell | 5.29e-22 | 120 |
| classical monocyte | 2.48e-21 | 42 |
| CD14-positive, CD16-negative classical monocyte | 2.48e-21 | 42 |
| nongranular leukocyte | 4.26e-21 | 115 |
| myeloid leukocyte | 9.60e-20 | 72 |
| hematopoietic stem cell | 1.04e-18 | 168 |
| hematopoietic cell | 1.09e-18 | 177 |
| defensive cell | 2.56e-18 | 48 |
| phagocyte | 2.56e-18 | 48 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 9.73e-30 | 114 |
| neural tube | 3.28e-27 | 56 |
| neural rod | 3.28e-27 | 56 |
| future spinal cord | 3.28e-27 | 56 |
| neural keel | 3.28e-27 | 56 |
| regional part of nervous system | 1.80e-25 | 53 |
| regional part of brain | 1.80e-25 | 53 |
| regional part of forebrain | 1.42e-20 | 41 |
| forebrain | 1.42e-20 | 41 |
| anterior neural tube | 1.42e-20 | 41 |
Showing 1 to 10 of 48 entries
