FFCP PHASE1:Hg19::chr10:98945597..98945620,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6585|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11085|TSSclassifier=S|UniProt=O75093,Q5T0V2|association_with_transcript=56bp_to_ENST00000266058,ENST00000371041_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_SLIT1_5end|id=chr10:98945597..98945620,-|ontology_enrichment_celltype=CL:0000047!6.58e-10!8;CL:0002322!2.10e-08!5;CL:0000540!4.85e-07!6;CL:0000031!4.85e-07!6;CL:0000404!4.85e-07!6|ontology_enrichment_celltype_v019=CL:0000123;8.05e-08;2!CL:0000242;8.05e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,7.01e-08,2|ontology_enrichment_development_v019=UBERON:0006601;1.35e-12;82!UBERON:0010122;8.05e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.36e-59!82;UBERON:0000073!1.57e-58!94;UBERON:0001016!1.57e-58!94;UBERON:0001049!1.02e-57!57;UBERON:0005068!1.02e-57!57;UBERON:0006241!1.02e-57!57;UBERON:0007135!1.02e-57!57;UBERON:0005743!1.89e-57!86;UBERON:0002780!1.68e-50!41;UBERON:0001890!1.68e-50!41;UBERON:0006240!1.68e-50!41;UBERON:0003080!4.78e-49!42;UBERON:0002616!2.61e-47!59;UBERON:0001893!1.02e-45!34;UBERON:0002020!1.44e-45!34;UBERON:0003528!1.44e-45!34;UBERON:0000955!8.46e-45!69;UBERON:0006238!8.46e-45!69;UBERON:0002791!7.81e-44!33;UBERON:0001869!4.25e-43!32;UBERON:0002619!1.20e-39!22;UBERON:0003075!6.51e-39!86;UBERON:0007284!6.51e-39!86;UBERON:0002346!1.56e-36!90;UBERON:0001950!5.39e-36!20;UBERON:0000956!3.37e-34!25;UBERON:0000203!3.37e-34!25;UBERON:0003056!4.60e-34!61;UBERON:0004121!9.91e-30!169;UBERON:0000924!1.26e-28!173;UBERON:0006601!1.26e-28!173;UBERON:0000153!1.34e-24!129;UBERON:0007811!1.34e-24!129;UBERON:0000033!8.42e-23!123;UBERON:0007023!1.50e-21!115;UBERON:0001871!2.89e-16!7;UBERON:0002420!4.13e-13!9;UBERON:0007245!4.13e-13!9;UBERON:0010009!4.13e-13!9;UBERON:0010011!4.13e-13!9;UBERON:0000454!4.13e-13!9;UBERON:0000200!1.02e-12!6;UBERON:0002308!1.28e-12!9;UBERON:0000125!1.28e-12!9;UBERON:0000025!8.90e-12!194;UBERON:0001872!6.66e-11!5;UBERON:0000349!7.96e-11!5;UBERON:0003076!3.23e-10!15;UBERON:0003057!3.23e-10!15;UBERON:0009663!1.33e-09!7;UBERON:0000064!7.25e-09!219;UBERON:0000369!7.61e-09!4;UBERON:0002435!7.61e-09!4;UBERON:0000204!7.61e-09!4;UBERON:0010082!7.61e-09!4;UBERON:0002298!1.78e-07!8;UBERON:0000483!2.93e-07!309;UBERON:0002771!4.29e-07!3;UBERON:0000119!4.68e-07!312;UBERON:0004111!4.86e-07!241;UBERON:0005383!6.74e-07!3;UBERON:0005382!6.74e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;3.40e-66;22!UBERON:0001869;2.75e-62;32!UBERON:0001950;1.19e-59;20!UBERON:0002791;6.71e-58;32!UBERON:0000956;6.76e-58;25!UBERON:0000203;6.76e-58;25!UBERON:0003528;8.27e-58;34!UBERON:0002020;8.27e-58;34!UBERON:0001893;6.03e-56;34!UBERON:0002780;2.62e-44;41!UBERON:0001890;2.62e-44;41!UBERON:0000073;4.60e-30;53!UBERON:0002616;4.60e-30;53!UBERON:0001871;3.98e-25;6!UBERON:0000955;4.89e-23;68!UBERON:0001017;8.81e-23;75!UBERON:0000200;5.50e-22;6!UBERON:0001016;7.00e-20;83!UBERON:0001872;1.32e-18;5!UBERON:0000349;3.24e-18;5!UBERON:0000369;1.04e-14;4!UBERON:0002435;1.04e-14;4!UBERON:0000204;1.04e-14;4!UBERON:0002420;6.31e-14;9!UBERON:0007245;6.31e-14;9!UBERON:0010009;6.31e-14;9!UBERON:0010011;6.31e-14;9!UBERON:0000454;6.31e-14;9!UBERON:0001870;6.36e-12;3!UBERON:0005383;3.59e-11;3!UBERON:0005382;3.59e-11;3!UBERON:0000125;1.22e-09;9!UBERON:0002308;1.22e-09;9!UBERON:0002771;1.76e-08;2!UBERON:0009663;2.02e-08;7!UBERON:0011216;2.15e-08;132!UBERON:0002702;2.32e-08;2!UBERON:0001876;3.09e-08;2!UBERON:0001954;3.90e-08;2!UBERON:0003022;3.90e-08;2!UBERON:0002421;3.90e-08;2!UBERON:0002600;3.90e-08;2!UBERON:0001873;8.05e-08;2!UBERON:0000007;1.06e-07;2!UBERON:0002021;2.31e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.65e-69,32;UBERON:0002619,3.16e-66,22;UBERON:0001893,3.92e-65,34;UBERON:0003528,9.99e-65,34;UBERON:0002020,9.99e-65,34;UBERON:0002791,6.27e-64,32;UBERON:0002780,8.55e-62,41;UBERON:0001890,8.55e-62,41;UBERON:0003080,8.55e-62,41;UBERON:0006240,8.55e-62,41;UBERON:0001950,1.47e-59,20;UBERON:0000956,6.34e-58,25;UBERON:0000203,6.34e-58,25;UBERON:0001049,1.81e-57,56;UBERON:0005068,1.81e-57,56;UBERON:0006241,1.81e-57,56;UBERON:0007135,1.81e-57,56;UBERON:0001017,5.97e-57,81;UBERON:0000073,1.78e-53,53;UBERON:0002616,1.78e-53,53;UBERON:0001016,3.35e-53,89;UBERON:0000955,1.12e-48,68;UBERON:0006238,1.12e-48,68;UBERON:0003056,1.95e-39,61;UBERON:0003075,7.61e-37,82;UBERON:0007284,7.61e-37,82;UBERON:0002346,9.08e-35,86;UBERON:0010371,1.90e-31,104;UBERON:0004121,1.53e-26,171;UBERON:0000924,1.53e-26,171;UBERON:0006601,1.53e-26,171;UBERON:0001871,3.40e-25,6;UBERON:0011216,2.15e-24,223;UBERON:0000200,6.97e-22,6;UBERON:0010314,1.61e-21,132;UBERON:0007023,2.23e-19,114;UBERON:0001872,1.42e-18,5;UBERON:0000349,1.97e-18,5;UBERON:0000369,7.95e-15,4;UBERON:0002435,7.95e-15,4;UBERON:0000204,7.95e-15,4;UBERON:0010082,7.95e-15,4;UBERON:0000025,2.37e-14,192;UBERON:0002420,4.63e-14,9;UBERON:0007245,4.63e-14,9;UBERON:0010009,4.63e-14,9;UBERON:0010011,4.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11085 | |||
|TSSclassifier=S | |||
|UniProt=O75093,Q5T0V2 | |||
|association_with_transcript=56bp_to_ENST00000266058,ENST00000371041_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SLIT1_5end | |||
|id=chr10:98945597..98945620,- | |||
|ontology_enrichment_celltype=CL:0000047!6.58e-10!8;CL:0002322!2.10e-08!5;CL:0000540!4.85e-07!6;CL:0000031!4.85e-07!6;CL:0000404!4.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.05e-08;2!CL:0000242;8.05e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.01e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.35e-12;82!UBERON:0010122;8.05e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.36e-59!82;UBERON:0000073!1.57e-58!94;UBERON:0001016!1.57e-58!94;UBERON:0001049!1.02e-57!57;UBERON:0005068!1.02e-57!57;UBERON:0006241!1.02e-57!57;UBERON:0007135!1.02e-57!57;UBERON:0005743!1.89e-57!86;UBERON:0002780!1.68e-50!41;UBERON:0001890!1.68e-50!41;UBERON:0006240!1.68e-50!41;UBERON:0003080!4.78e-49!42;UBERON:0002616!2.61e-47!59;UBERON:0001893!1.02e-45!34;UBERON:0002020!1.44e-45!34;UBERON:0003528!1.44e-45!34;UBERON:0000955!8.46e-45!69;UBERON:0006238!8.46e-45!69;UBERON:0002791!7.81e-44!33;UBERON:0001869!4.25e-43!32;UBERON:0002619!1.20e-39!22;UBERON:0003075!6.51e-39!86;UBERON:0007284!6.51e-39!86;UBERON:0002346!1.56e-36!90;UBERON:0001950!5.39e-36!20;UBERON:0000956!3.37e-34!25;UBERON:0000203!3.37e-34!25;UBERON:0003056!4.60e-34!61;UBERON:0004121!9.91e-30!169;UBERON:0000924!1.26e-28!173;UBERON:0006601!1.26e-28!173;UBERON:0000153!1.34e-24!129;UBERON:0007811!1.34e-24!129;UBERON:0000033!8.42e-23!123;UBERON:0007023!1.50e-21!115;UBERON:0001871!2.89e-16!7;UBERON:0002420!4.13e-13!9;UBERON:0007245!4.13e-13!9;UBERON:0010009!4.13e-13!9;UBERON:0010011!4.13e-13!9;UBERON:0000454!4.13e-13!9;UBERON:0000200!1.02e-12!6;UBERON:0002308!1.28e-12!9;UBERON:0000125!1.28e-12!9;UBERON:0000025!8.90e-12!194;UBERON:0001872!6.66e-11!5;UBERON:0000349!7.96e-11!5;UBERON:0003076!3.23e-10!15;UBERON:0003057!3.23e-10!15;UBERON:0009663!1.33e-09!7;UBERON:0000064!7.25e-09!219;UBERON:0000369!7.61e-09!4;UBERON:0002435!7.61e-09!4;UBERON:0000204!7.61e-09!4;UBERON:0010082!7.61e-09!4;UBERON:0002298!1.78e-07!8;UBERON:0000483!2.93e-07!309;UBERON:0002771!4.29e-07!3;UBERON:0000119!4.68e-07!312;UBERON:0004111!4.86e-07!241;UBERON:0005383!6.74e-07!3;UBERON:0005382!6.74e-07!3 | |||
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|short_description=p3@SLIT1 | |||
}} |
Revision as of 15:13, 10 September 2013
Short description: | p3@SLIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLIT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 56bp_to_ENST00000266058, ENST00000371041_5end |
EntrezGene: | SLIT1 |
HGNC: | 11085 |
UniProt: | O75093Q5T0V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.01e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.