FFCP PHASE1:Hg19::chr1:77748756..77748797,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26289|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=365|TSSclassifier=S|UniProt=E9PQQ8|association_with_transcript=0bp_to_ENST00000478407_5end|coexpression_cluster_id=C3|description=CAGE_peak_8_at_AK5_5end|id=chr1:77748756..77748797,+|ontology_enrichment_celltype=CL:0000057!9.02e-11!75;CL:0002620!2.06e-10!23;CL:0000055!4.26e-08!180|ontology_enrichment_celltype_v019=CL:0000511;1.85e-07;1!CL:0002625;1.85e-07;1!CL:0000216;1.85e-07;1|ontology_enrichment_celltype_v019_2=CL:0000511,1.74e-07,1;CL:0002625,1.74e-07,1;CL:0000216,1.74e-07,1|ontology_enrichment_development_v019=UBERON:0006601;1.57e-15;82!UBERON:0010122;5.77e-13;2!UBERON:0006222;5.18e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.48e-33!57;UBERON:0005068!4.48e-33!57;UBERON:0006241!4.48e-33!57;UBERON:0007135!4.48e-33!57;UBERON:0003080!1.52e-30!42;UBERON:0001893!8.92e-30!34;UBERON:0002616!1.08e-29!59;UBERON:0002020!2.87e-29!34;UBERON:0003528!2.87e-29!34;UBERON:0002780!3.38e-29!41;UBERON:0001890!3.38e-29!41;UBERON:0006240!3.38e-29!41;UBERON:0002791!2.47e-28!33;UBERON:0001869!1.68e-27!32;UBERON:0000073!3.67e-27!94;UBERON:0001016!3.67e-27!94;UBERON:0005743!7.08e-26!86;UBERON:0001017!2.88e-25!82;UBERON:0000955!1.05e-24!69;UBERON:0006238!1.05e-24!69;UBERON:0002619!4.87e-24!22;UBERON:0003075!1.39e-23!86;UBERON:0007284!1.39e-23!86;UBERON:0000956!1.89e-22!25;UBERON:0000203!1.89e-22!25;UBERON:0002346!6.51e-22!90;UBERON:0001950!5.44e-21!20;UBERON:0003056!2.49e-20!61;UBERON:0000033!2.02e-18!123;UBERON:0000153!7.24e-17!129;UBERON:0007811!7.24e-17!129;UBERON:0004121!1.24e-15!169;UBERON:0000924!6.92e-15!173;UBERON:0006601!6.92e-15!173;UBERON:0007023!1.02e-14!115;UBERON:0000475!3.81e-12!365;UBERON:0004111!2.21e-11!241;UBERON:0000477!2.52e-11!286;UBERON:0000200!1.17e-10!6;UBERON:0000025!2.18e-10!194;UBERON:0000349!1.28e-09!5;UBERON:0002420!6.65e-09!9;UBERON:0007245!6.65e-09!9;UBERON:0010009!6.65e-09!9;UBERON:0010011!6.65e-09!9;UBERON:0000454!6.65e-09!9;UBERON:0000483!7.40e-09!309;UBERON:0000119!1.36e-08!312;UBERON:0002298!2.28e-08!8;UBERON:0002308!3.15e-08!9;UBERON:0000125!3.15e-08!9;UBERON:0000369!6.14e-08!4;UBERON:0002435!6.14e-08!4;UBERON:0000204!6.14e-08!4;UBERON:0010082!6.14e-08!4;UBERON:0001871!8.38e-08!7|ontology_enrichment_uberon_v019=UBERON:0001893;1.02e-89;34!UBERON:0002619;4.60e-89;22!UBERON:0001869;2.75e-88;32!UBERON:0002791;7.56e-82;32!UBERON:0000956;2.46e-78;25!UBERON:0000203;2.46e-78;25!UBERON:0001950;1.40e-77;20!UBERON:0003528;1.73e-75;34!UBERON:0002020;1.73e-75;34!UBERON:0002780;2.51e-63;41!UBERON:0001890;2.51e-63;41!UBERON:0000073;3.77e-38;53!UBERON:0002616;3.77e-38;53!UBERON:0000200;9.13e-35;6!UBERON:0000349;5.09e-31;5!UBERON:0000369;8.82e-25;4!UBERON:0002435;8.82e-25;4!UBERON:0000204;8.82e-25;4!UBERON:0000955;2.07e-24;68!UBERON:0002420;3.88e-24;9!UBERON:0007245;3.88e-24;9!UBERON:0010009;3.88e-24;9!UBERON:0010011;3.88e-24;9!UBERON:0000454;3.88e-24;9!UBERON:0001017;1.64e-23;75!UBERON:0001871;1.57e-21;6!UBERON:0005383;6.14e-19;3!UBERON:0005382;6.14e-19;3!UBERON:0001872;8.10e-19;5!UBERON:0001870;1.19e-18;3!UBERON:0002021;1.29e-18;5!UBERON:0001016;3.40e-16;83!UBERON:0009663;3.06e-14;7!UBERON:0001954;1.66e-13;2!UBERON:0003022;1.66e-13;2!UBERON:0002421;1.66e-13;2!UBERON:0002600;1.66e-13;2!UBERON:0001876;1.88e-13;2!UBERON:0007023;4.52e-13;114!UBERON:0001873;5.77e-13;2!UBERON:0002702;6.51e-13;2!UBERON:0002771;8.52e-13;2!UBERON:0000125;4.20e-11;9!UBERON:0002308;4.20e-11;9!UBERON:0011216;5.65e-08;132!UBERON:0001874;1.05e-07;1!UBERON:0002022;1.23e-07;1!UBERON:0001882;1.40e-07;1!UBERON:0005403;1.40e-07;1!UBERON:0001136;1.85e-07;1!UBERON:0001343;1.85e-07;1!UBERON:0004910;1.85e-07;1!UBERON:0004813;1.85e-07;1!UBERON:0003112;2.84e-07;1!UBERON:0011158;2.84e-07;1!UBERON:0007190;2.84e-07;1!UBERON:0003128;2.84e-07;1!UBERON:0001703;2.84e-07;1!UBERON:0002241;2.84e-07;1!UBERON:0002581;5.18e-07;1!UBERON:0002902;5.18e-07;1!UBERON:0002336;5.18e-07;1!UBERON:0011215;5.18e-07;1!UBERON:0001018;5.18e-07;1!UBERON:0002473;5.18e-07;1!UBERON:0005340;5.18e-07;1!UBERON:0003544;5.18e-07;1!UBERON:0005970;5.18e-07;1!UBERON:0009899;5.18e-07;1!UBERON:0002316;5.18e-07;1!UBERON:0001020;5.18e-07;1!UBERON:0002437;5.18e-07;1!UBERON:0010314;6.09e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001893,2.01e-101,34;UBERON:0001869,1.99e-99,32;UBERON:0002791,4.40e-91,32;UBERON:0002780,1.49e-90,41;UBERON:0001890,1.49e-90,41;UBERON:0003080,1.49e-90,41;UBERON:0006240,1.49e-90,41;UBERON:0002619,2.96e-89,22;UBERON:0003528,1.30e-85,34;UBERON:0002020,1.30e-85,34;UBERON:0000956,1.67e-78,25;UBERON:0000203,1.67e-78,25;UBERON:0001950,8.72e-78,20;UBERON:0000073,2.60e-69,53;UBERON:0002616,2.60e-69,53;UBERON:0001049,2.13e-65,56;UBERON:0005068,2.13e-65,56;UBERON:0006241,2.13e-65,56;UBERON:0007135,2.13e-65,56;UBERON:0003056,1.03e-59,61;UBERON:0000955,1.10e-56,68;UBERON:0006238,1.10e-56,68;UBERON:0001017,7.22e-51,81;UBERON:0001016,2.28e-45,89;UBERON:0003075,2.60e-43,82;UBERON:0007284,2.60e-43,82;UBERON:0002346,4.40e-41,86;UBERON:0007023,1.78e-38,114;UBERON:0000200,6.61e-35,6;UBERON:0010371,3.74e-33,104;UBERON:0000349,4.38e-31,5;UBERON:0010314,2.44e-27,132;UBERON:0004121,3.61e-25,171;UBERON:0000924,3.61e-25,171;UBERON:0006601,3.61e-25,171;UBERON:0000369,6.52e-25,4;UBERON:0002435,6.52e-25,4;UBERON:0000204,6.52e-25,4;UBERON:0010082,6.52e-25,4;UBERON:0002420,2.82e-24,9;UBERON:0007245,2.82e-24,9;UBERON:0010009,2.82e-24,9;UBERON:0010011,2.82e-24,9;UBERON:0000454,2.82e-24,9;UBERON:0001871,1.57e-21,6;UBERON:0005383,4.68e-19,3;UBERON:0005382,4.68e-19,3;UBERON:0001872,7.38e-19,5;UBERON:0002021,9.77e-19,5;UBERON:0001870,1.03e-18,3;UBERON:0011216,1.51e-16,223;UBERON:0000025,1.19e-15,192;UBERON:0009663,2.59e-14,7;UBERON:0004111,6.61e-14,240;UBERON:0001876,1.56e-13,2;UBERON:0001954,1.77e-13,2;UBERON:0003022,1.77e-13,2;UBERON:0002421,1.77e-13,2;UBERON:0002600,1.77e-13,2;UBERON:0001873,4.40e-13,2;UBERON:0010122,4.40e-13,2;UBERON:0002702,6.32e-13,2;UBERON:0002771,1.02e-12,2;UBERON:0000125,3.69e-11,9;UBERON:0002308,3.69e-11,9;UBERON:0000483,8.60e-09,306;UBERON:0000119,1.18e-08,309;UBERON:0001874,1.06e-07,1;UBERON:0002022,1.27e-07,1;UBERON:0001882,1.36e-07,1;UBERON:0005403,1.36e-07,1;UBERON:0001136,1.74e-07,1;UBERON:0001343,1.74e-07,1;UBERON:0004910,1.74e-07,1;UBERON:0005154,1.74e-07,1;UBERON:0005295,1.74e-07,1;UBERON:0004813,1.74e-07,1;UBERON:0005297,1.74e-07,1;UBERON:0005294,1.74e-07,1;UBERON:0010141,1.74e-07,1;UBERON:0005891,1.74e-07,1;UBERON:0007190,2.52e-07,1;UBERON:0003112,2.67e-07,1;UBERON:0011158,2.67e-07,1;UBERON:0003128,2.67e-07,1;UBERON:0001703,2.67e-07,1;UBERON:0002241,2.67e-07,1;UBERON:0004761,2.67e-07,1;UBERON:0009617,2.67e-07,1;UBERON:0002581,3.62e-07,1;UBERON:0002902,3.85e-07,1;UBERON:0009899,3.85e-07,1;UBERON:0002336,5.84e-07,1;UBERON:0011215,5.84e-07,1;UBERON:0001018,5.84e-07,1;UBERON:0002473,5.84e-07,1;UBERON:0005340,5.84e-07,1;UBERON:0003544,5.84e-07,1;UBERON:0005970,5.84e-07,1;UBERON:0002316,5.84e-07,1;UBERON:0001020,5.84e-07,1;UBERON:0002437,5.84e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0.149448680551801,0.704606991862589,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0.919463387397059,0.45071417671979,0.680593098960126,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0.515281080091258,0.744467425326359,0.675105328965065,0.292311015483596,0,0.184099797284599,0.484938170456436,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,2.08014873822732,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,3.21367859688319,0.290012154876366,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,3.97659059106519,6.18945432206256,0.222617410045812,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,2.41197055220813,0,0,0,1.44999915086959,0,0,0,0,0,0,1.77148277162768,5.66803261539417,0,0,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,1.1713222286267,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67202616544096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54275627771164,3.13267834056624,0,0.275078873194468,0,0,0,5.04221320261605,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.05065662254908,1.251909307065,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=365 | |||
|TSSclassifier=S | |||
|UniProt=E9PQQ8 | |||
|association_with_transcript=0bp_to_ENST00000478407_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_AK5_5end | |||
|id=chr1:77748756..77748797,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.02e-11!75;CL:0002620!2.06e-10!23;CL:0000055!4.26e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.85e-07;1!CL:0002625;1.85e-07;1!CL:0000216;1.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.74e-07,1;CL:0002625,1.74e-07,1;CL:0000216,1.74e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-15;82!UBERON:0010122;5.77e-13;2!UBERON:0006222;5.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@AK5 | |||
}} |
Revision as of 06:46, 12 September 2013
Short description: | p8@AK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_AK5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000478407_5end |
EntrezGene: | AK5 |
HGNC: | 365 |
UniProt: | E9PQQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.74e-07 | 1 |
seminiferous tubule epithelial cell | 1.74e-07 | 1 |
Sertoli cell | 1.74e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.