FFCP PHASE1:Hg19::chr2:166095942..166095965,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10588 | |||
|TSSclassifier=W | |||
|UniProt=Q99250,A8K0U1 | |||
|association_with_transcript=30bp_to_ENST00000357398,ENST00000375437,ENST00000424833,NM_001040142,uc002udc.2_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_SCN2A_5end | |||
|id=chr2:166095942..166095965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.71e-25;82!UBERON:0006215;1.26e-09;3!UBERON:0006241;8.61e-08;3!UBERON:0003057;8.61e-08;3 | |||
|ontology_enrichment_disease=DOID:171!6.94e-08!10;DOID:169!2.21e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;1.06e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.04e-07,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,8.05521314310933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,2.31986643833309,2.34522771468088,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,162.046066585907,63.7232456339623,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,34.8959788594279,90.7272000022905,51.8995874803105,0,0,0,0,0,0,1.03423011972439,9.91455685503065,2.43074992906609,84.1454316523147,64.0367089100916,559.974972283695,432.696644110882,224.91173802365,100.478511896519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,7.88593255873921,0,28.345997932766,0,0,0,0,0,36.1165858723978,2.71702292402498,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97157629717171,0,0,105.918961634185,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,27.0189129919405,9.72028190133151,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,205.1692599708,48.6246159818325,0,0,0,0,0,106.129475481569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3316877996558,30.5457310025614,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,136.454499714916,138.255758133924,90.5130429007994,14.9086390879419,32.0584958941503,21.2990662088945,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.2542748618796,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0.895260599125562,8.3025104775445,1.41539347670307,2.40261204022431,0,1.06287460050841,0,0,0,0,23.2165517002786,0,0,81.0572820717319,130.360850219538,46.453452985631,75.4828220405978,49.6581241556785,61.6191119456181,80.4148715246618,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,71.4547645262615,114.037402397622,82.4680318039724,78.6990204506384,49.774707620658,0,0,3.34155364283279,0,50.355972572559,49.7699908883859,23.064692960992,25.4981654313453,0,0,0,39.8982332574002,72.1527325984454,0,0,0.078493092850514,88.4560771227091,0,6.39211104356647,0,0,2.71610867871294,0,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9769708788558,60.0831340987332,0,0,0,9.05777061400041,0.154348316215889,0.218559560503957,11.7579324090381,0,30.6379511232114,16.8825281718853,6.53502080719589,13.9476390102522,0,0,0.128915775947154,0,0,0,0,0,0,3.29681041248338,0.157771562193185,70.7791412887422,36.2171072982513,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,20.7292359864695,11.9982275199798,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p2@SCN2A | |||
}} |
Revision as of 14:28, 12 September 2013
Short description: | p2@SCN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SCN2A_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 30bp_to_ENST00000357398, ENST00000375437, ENST00000424833, NM_001040142, uc002udc.2_5end |
EntrezGene: | SCN2A |
HGNC: | 10588 |
UniProt: | Q99250A8K0U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.04e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.