FFCP PHASE1:Hg19::chr2:45169143..45169167,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |||
|TSSclassifier=strong | |||
|UniProt=O95343 | |||
|association_with_transcript=106bp_to_NM_005413,uc002run.1_5end | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_5_at_SIX3_5end | |||
|id=chr2:45169143..45169167,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.21e-08!5;CL:0000306!7.07e-08!4;CL:0002222!7.07e-08!4;CL:0002224!7.07e-08!4;CL:0002586!7.92e-07!3;CL:0000075!9.03e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.19e-14;4!CL:0002222;1.19e-14;4!CL:0002224;1.19e-14;4!CL:0002586;1.78e-12;3!CL:0000064;3.35e-12;3!CL:0000067;3.35e-12;3!CL:0005012;3.35e-12;3!CL:0002304;3.35e-12;3!CL:0000149;1.90e-09;4!CL:0000075;4.05e-09;27!CL:0000147;7.88e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.18e-14,4;CL:0002222,1.18e-14,4;CL:0002224,1.18e-14,4;CL:0002586,1.72e-12,3;CL:0000064,3.23e-12,3;CL:0000067,3.23e-12,3;CL:0005012,3.23e-12,3;CL:0002304,3.23e-12,3;CL:0000149,1.85e-09,4;CL:0000075,4.03e-09,27;CL:0000147,8.00e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.45e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.23e-40!90;UBERON:0003056!1.17e-39!61;UBERON:0003075!6.84e-38!86;UBERON:0007284!6.84e-38!86;UBERON:0000073!1.94e-29!94;UBERON:0001016!1.94e-29!94;UBERON:0005743!1.05e-27!86;UBERON:0002780!7.35e-27!41;UBERON:0001890!7.35e-27!41;UBERON:0006240!7.35e-27!41;UBERON:0003080!5.22e-26!42;UBERON:0000924!1.30e-25!173;UBERON:0006601!1.30e-25!173;UBERON:0002616!1.68e-24!59;UBERON:0004121!1.67e-23!169;UBERON:0000955!1.90e-23!69;UBERON:0006238!1.90e-23!69;UBERON:0001017!5.26e-23!82;UBERON:0000033!1.71e-22!123;UBERON:0001049!2.14e-22!57;UBERON:0005068!2.14e-22!57;UBERON:0006241!2.14e-22!57;UBERON:0007135!2.14e-22!57;UBERON:0000153!1.02e-21!129;UBERON:0007811!1.02e-21!129;UBERON:0002791!8.93e-21!33;UBERON:0001893!5.72e-20!34;UBERON:0007625!1.03e-19!11;UBERON:0002020!3.81e-18!34;UBERON:0003528!3.81e-18!34;UBERON:0001869!5.51e-18!32;UBERON:0000970!6.54e-16!20;UBERON:0002104!6.12e-15!21;UBERON:0000019!1.92e-14!19;UBERON:0000047!1.92e-14!19;UBERON:0004088!1.92e-14!19;UBERON:0003072!1.92e-14!19;UBERON:0003071!1.92e-14!19;UBERON:0004128!1.92e-14!19;UBERON:0000020!2.95e-13!23;UBERON:0001456!1.10e-12!21;UBERON:0001032!1.60e-12!24;UBERON:0004456!1.60e-12!24;UBERON:0009663!7.86e-12!7;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0000956!2.67e-11!25;UBERON:0000203!2.67e-11!25;UBERON:0007023!1.35e-10!115;UBERON:0000966!3.63e-10!5;UBERON:0005388!3.63e-10!5;UBERON:0001802!3.63e-10!5;UBERON:0002308!7.05e-09!9;UBERON:0000125!7.05e-09!9;UBERON:0001894!8.76e-09!7;UBERON:0006222!8.76e-09!7;UBERON:0002619!1.16e-08!22;UBERON:0000488!2.44e-08!4;UBERON:0001950!3.22e-08!20;UBERON:0005085!3.89e-08!29;UBERON:0000369!5.18e-08!4;UBERON:0002435!5.18e-08!4;UBERON:0000204!5.18e-08!4;UBERON:0010082!5.18e-08!4;UBERON:0000064!6.26e-08!219;UBERON:0010077!7.07e-08!4;UBERON:0005389!7.07e-08!4;UBERON:0000484!7.07e-08!4;UBERON:0002546!7.07e-08!4;UBERON:0000965!7.07e-08!4;UBERON:0001803!7.07e-08!4;UBERON:0003073!7.07e-08!4;UBERON:0005426!7.07e-08!4;UBERON:0000475!9.31e-08!365;UBERON:0000922!1.77e-07!612;UBERON:0000483!1.79e-07!309;UBERON:0001801!1.81e-07!14;UBERON:0000119!3.01e-07!312;UBERON:0002114!4.51e-07!12;UBERON:0002200!4.78e-07!11;UBERON:0006876!4.78e-07!11;UBERON:0001781!7.92e-07!3;UBERON:0001782!7.92e-07!3;UBERON:0005424!7.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.93e-39;11!UBERON:0000970;9.49e-34;20!UBERON:0002104;5.67e-32;21!UBERON:0000019;1.29e-30;19!UBERON:0000047;1.29e-30;19!UBERON:0004088;1.29e-30;19!UBERON:0010230;1.29e-30;19!UBERON:0000020;6.97e-29;23!UBERON:0001032;1.56e-27;24!UBERON:0004456;1.56e-27;24!UBERON:0001456;2.15e-27;21!UBERON:0000966;2.14e-19;5!UBERON:0005388;2.14e-19;5!UBERON:0001802;2.14e-19;5!UBERON:0002420;2.85e-18;9!UBERON:0007245;2.85e-18;9!UBERON:0010009;2.85e-18;9!UBERON:0010011;2.85e-18;9!UBERON:0000454;2.85e-18;9!UBERON:0009663;7.60e-18;7!UBERON:0001801;1.13e-15;14!UBERON:0000488;1.31e-15;4!UBERON:0000369;7.14e-15;4!UBERON:0002435;7.14e-15;4!UBERON:0000204;7.14e-15;4!UBERON:0010077;1.19e-14;4!UBERON:0005389;1.19e-14;4!UBERON:0000484;1.19e-14;4!UBERON:0000965;1.19e-14;4!UBERON:0001803;1.19e-14;4!UBERON:0000125;9.86e-14;9!UBERON:0002308;9.86e-14;9!UBERON:0001894;1.64e-12;7!UBERON:0001781;1.78e-12;3!UBERON:0001782;1.78e-12;3!UBERON:0001778;3.35e-12;3!UBERON:0001775;3.35e-12;3!UBERON:0010371;6.74e-12;31!UBERON:0005383;7.91e-12;3!UBERON:0005382;7.91e-12;3!UBERON:0002203;2.08e-10;6!UBERON:0001768;2.08e-10;6!UBERON:0002200;2.08e-10;6!UBERON:0002780;4.53e-09;41!UBERON:0001890;4.53e-09;41!UBERON:0000007;1.76e-08;2!UBERON:0001264;1.83e-08;10!UBERON:0001873;2.45e-08;2!UBERON:0006876;2.82e-08;11!UBERON:0001897;8.34e-08;2!UBERON:0010225;8.34e-08;2!UBERON:0001444;8.77e-08;48!UBERON:0001875;8.94e-08;2!UBERON:0006514;8.94e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.78e-39,11;UBERON:0003056,7.45e-33,61;UBERON:0000970,5.76e-32,21;UBERON:0002104,5.76e-32,21;UBERON:0000019,6.28e-29,20;UBERON:0000047,6.28e-29,20;UBERON:0010312,6.28e-29,20;UBERON:0004088,6.28e-29,20;UBERON:0010230,6.28e-29,20;UBERON:0003072,6.28e-29,20;UBERON:0004128,6.28e-29,20;UBERON:0003071,6.28e-29,20;UBERON:0000020,1.58e-27,24;UBERON:0001032,1.58e-27,24;UBERON:0004456,1.58e-27,24;UBERON:0001456,5.25e-26,22;UBERON:0002346,1.97e-23,86;UBERON:0003075,8.15e-23,82;UBERON:0007284,8.15e-23,82;UBERON:0002420,2.60e-18,9;UBERON:0007245,2.60e-18,9;UBERON:0010009,2.60e-18,9;UBERON:0010011,2.60e-18,9;UBERON:0000454,2.60e-18,9;UBERON:0009663,6.36e-18,7;UBERON:0005085,1.56e-17,31;UBERON:0010371,1.23e-16,104;UBERON:0000966,4.21e-16,6;UBERON:0005388,4.21e-16,6;UBERON:0001802,4.21e-16,6;UBERON:0001801,1.12e-15,14;UBERON:0000488,1.31e-15,4;UBERON:0000369,6.20e-15,4;UBERON:0002435,6.20e-15,4;UBERON:0000204,6.20e-15,4;UBERON:0010082,6.20e-15,4;UBERON:0010077,1.18e-14,4;UBERON:0005389,1.18e-14,4;UBERON:0000484,1.18e-14,4;UBERON:0002546,1.18e-14,4;UBERON:0000965,1.18e-14,4;UBERON:0001803,1.18e-14,4;UBERON:0003073,1.18e-14,4;UBERON:0005426,1.18e-14,4;UBERON:0004121,3.77e-14,171;UBERON:0000924,3.77e-14,171;UBERON:0006601,3.77e-14,171;UBERON:0010314,4.29e-14,132;UBERON:0000125,8.61e-14,9;UBERON:0002308,8.61e-14,9;UBERON:0001894,1.56e-12,7;UBERON:0006222,1.56e-12,7;UBERON:0001782,1.72e-12,3;UBERON:0005424,1.72e-12,3;UBERON:0001778,3.23e-12,3;UBERON:0001775,3.23e-12,3;UBERON:0005383,8.06e-12,3;UBERON:0005382,8.06e-12,3;UBERON:0002780,3.90e-11,41;UBERON:0001890,3.90e-11,41;UBERON:0003080,3.90e-11,41;UBERON:0006240,3.90e-11,41;UBERON:0002203,2.08e-10,6;UBERON:0001768,2.08e-10,6;UBERON:0002200,2.08e-10,6;UBERON:0001016,4.04e-10,89;UBERON:0001444,5.70e-10,49;UBERON:0001781,1.85e-09,4;UBERON:0001017,3.70e-09,81;UBERON:0000955,5.20e-09,68;UBERON:0006238,5.20e-09,68;UBERON:0001264,1.54e-08,10;UBERON:0000007,1.67e-08,2;UBERON:0000033,2.33e-08,56;UBERON:0001873,2.58e-08,2;UBERON:0010122,2.58e-08,2;UBERON:0006876,2.98e-08,11;UBERON:0000073,4.83e-08,53;UBERON:0002616,4.83e-08,53;UBERON:0001875,8.35e-08,2;UBERON:0006514,8.35e-08,2;UBERON:0001897,9.26e-08,2;UBERON:0010225,9.26e-08,2;UBERON:0001049,1.78e-07,56;UBERON:0005068,1.78e-07,56;UBERON:0006241,1.78e-07,56;UBERON:0007135,1.78e-07,56;UBERON:0000076,2.42e-07,8;UBERON:0000153,2.82e-07,62;UBERON:0007811,2.82e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1004565970007,6.87361132133948,7.29028721252946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27036141467397,0.576175924479999,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,1.04574548582567,1.7622379352613,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51957679134397,0,0,0,0,0,0,2.88662684050547,14.7231614318348,3.28744343860301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.23220450419001,16.0727176392856,12.6897573919078,0,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,3.15537356548735,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0,0,1.56262495439963,3.54296554325536,6.15041836989581,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,3.95404604628809,4.49014382873458,0.539209063845416,0,2.81117334870407,0,0,0.485560759068186,0,0,0.30607276163049,1.32691817219825,0,0,5.31723098165748,1.98595173525299,3.45326210247948,3.58417289318877,0,1.94144542218394,0,0,0,0,0,0,0,0,0,0,7.00540296419651,0,0,0.443175571691151,0.586654148204409,0,0,0.19980960958213,3.31407959454444,4.69600044280254,0.857974989309823,0,0,0,0,0,0,0,3.60252173225874,1.36905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,1.5840050477911,0.35857467866569,0,0,0,0,0,0,0,2.39460383124975,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,2.19986135440423,1.06691729694141,0,0,0,0.839277046316667,0.622077260032973,2.55788742607303,0,0.629063767423586,3.38549878395243,4.58277830875868,0.212574920101683,0.495743057036009,0,0,0,0,0,0,2.82608590424422,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,2.58591088751157,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.413373593002368,0.0634158101939068,1.09394961803644,0,0,0,0,0,0.336283722218824,6.67662164660295,5.91921697513374,0,0,0,0,0.0657727735628491,0.236387681767936,0.333694205676207,0,7.69866390588409,0,0,0,0,9.07752111043536,6.63657169277452,0,12.1700790611806,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0.233939463462106,0,9.39468717142792,0,11.7636352917609,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.473314686579554,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,2.48750831837634,2.37895890482359,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0,0,1.61685363791856,0,0,0,0,0,2.56454793842586 | |||
|short_description=p5@SIX3 | |||
}} |
Revision as of 02:54, 21 January 2014
Short description: | p5@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIX3_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | 106bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.18e-14 | 4 |
vertebrate lens cell | 1.18e-14 | 4 |
lens epithelial cell | 1.18e-14 | 4 |
retinal pigment epithelial cell | 1.72e-12 | 3 |
ciliated cell | 3.23e-12 | 3 |
ciliated epithelial cell | 3.23e-12 | 3 |
multi-ciliated epithelial cell | 3.23e-12 | 3 |
non-pigmented ciliary epithelial cell | 3.23e-12 | 3 |
visual pigment cell | 1.85e-09 | 4 |
columnar/cuboidal epithelial cell | 4.03e-09 | 27 |
pigment cell | 8.00e-09 | 14 |