FFCP PHASE1:Hg19::chrX:148562594..148562662,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3423 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5389 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=45bp_to_AK057191_5end | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_9_at_IDS_5end | |||
|id=chrX:148562594..148562662,- | |||
|ontology_enrichment_celltype=CL:0000766!9.44e-11!76;CL:0002057!1.68e-10!42;CL:0000557!9.34e-10!71;CL:0000738!9.71e-10!140;CL:0002031!5.10e-09!124;CL:0000860!8.51e-09!45;CL:0002009!8.67e-09!65;CL:0000839!1.07e-08!70;CL:0002194!3.88e-08!63;CL:0000576!3.88e-08!63;CL:0000040!3.88e-08!63;CL:0000559!3.88e-08!63;CL:0002087!1.03e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-14;33!CL:0002057;5.08e-14;33!CL:0000473;2.95e-12;39!CL:0000234;2.95e-12;39!CL:0000775;6.30e-09;3!CL:0000576;8.99e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-12,72;CL:0000473,1.75e-12,48;CL:0000234,1.75e-12,48;CL:0000860,1.45e-11,42;CL:0002057,1.45e-11,42;CL:0002194,2.09e-10,59;CL:0000576,2.09e-10,59;CL:0000040,2.09e-10,59;CL:0000559,2.09e-10,59;CL:0002009,6.39e-10,61;CL:0000775,6.81e-09,3;CL:0000839,7.74e-09,66;CL:0000557,1.22e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-08;42!UBERON:0006215;7.55e-08;3!UBERON:0006601;1.23e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-21!82;UBERON:0001049!4.70e-20!57;UBERON:0005068!4.70e-20!57;UBERON:0006241!4.70e-20!57;UBERON:0007135!4.70e-20!57;UBERON:0005743!8.50e-20!86;UBERON:0000955!1.05e-18!69;UBERON:0006238!1.05e-18!69;UBERON:0002020!1.28e-18!34;UBERON:0003528!1.28e-18!34;UBERON:0002780!2.19e-18!41;UBERON:0001890!2.19e-18!41;UBERON:0006240!2.19e-18!41;UBERON:0001893!4.84e-18!34;UBERON:0002616!5.11e-18!59;UBERON:0001869!1.32e-17!32;UBERON:0003080!1.85e-17!42;UBERON:0002791!2.16e-17!33;UBERON:0000073!7.15e-17!94;UBERON:0001016!7.15e-17!94;UBERON:0002619!3.45e-15!22;UBERON:0000956!6.91e-15!25;UBERON:0000203!6.91e-15!25;UBERON:0001950!1.05e-13!20;UBERON:0007023!2.52e-13!115;UBERON:0003075!3.65e-11!86;UBERON:0007284!3.65e-11!86;UBERON:0000033!9.99e-11!123;UBERON:0000153!1.11e-10!129;UBERON:0007811!1.11e-10!129;UBERON:0002346!1.69e-10!90;UBERON:0003056!4.15e-09!61;UBERON:0004765!6.19e-09!101;UBERON:0001434!6.19e-09!101;UBERON:0004121!4.98e-08!169;UBERON:0002371!5.63e-08!80;UBERON:0001474!8.76e-08!86;UBERON:0000924!9.88e-08!173;UBERON:0006601!9.88e-08!173;UBERON:0002390!3.96e-07!102;UBERON:0003061!3.96e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.68e-47;22!UBERON:0001869;4.40e-43;32!UBERON:0001950;6.87e-42;20!UBERON:0003528;3.38e-41;34!UBERON:0002020;3.38e-41;34!UBERON:0000956;6.78e-41;25!UBERON:0000203;6.78e-41;25!UBERON:0002791;3.47e-40;32!UBERON:0001893;9.10e-39;34!UBERON:0002780;2.01e-31;41!UBERON:0001890;2.01e-31;41!UBERON:0000073;5.13e-27;53!UBERON:0002616;5.13e-27;53!UBERON:0001017;1.03e-16;75!UBERON:0000200;5.60e-16;6!UBERON:0000955;6.95e-16;68!UBERON:0001016;3.14e-14;83!UBERON:0001871;1.17e-13;6!UBERON:0000349;1.85e-13;5!UBERON:0001872;3.22e-13;5!UBERON:0002420;7.71e-10;9!UBERON:0007245;7.71e-10;9!UBERON:0010009;7.71e-10;9!UBERON:0010011;7.71e-10;9!UBERON:0000454;7.71e-10;9!UBERON:0000125;1.51e-09;9!UBERON:0002308;1.51e-09;9!UBERON:0002021;2.28e-09;5!UBERON:0001870;9.60e-09;3!UBERON:0007023;5.10e-07;114!UBERON:0002771;7.07e-07;2!UBERON:0001954;7.68e-07;2!UBERON:0003022;7.68e-07;2!UBERON:0002421;7.68e-07;2!UBERON:0002600;7.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,3.37e-49,34;UBERON:0002020,3.37e-49,34;UBERON:0001869,4.70e-49,32;UBERON:0000073,1.51e-47,53;UBERON:0002616,1.51e-47,53;UBERON:0001049,2.28e-47,56;UBERON:0005068,2.28e-47,56;UBERON:0006241,2.28e-47,56;UBERON:0007135,2.28e-47,56;UBERON:0002619,2.43e-47,22;UBERON:0001893,8.48e-46,34;UBERON:0002791,3.58e-45,32;UBERON:0002780,4.83e-43,41;UBERON:0001890,4.83e-43,41;UBERON:0003080,4.83e-43,41;UBERON:0006240,4.83e-43,41;UBERON:0001950,3.89e-42,20;UBERON:0000956,3.82e-41,25;UBERON:0000203,3.82e-41,25;UBERON:0001017,1.01e-37,81;UBERON:0000955,7.27e-37,68;UBERON:0006238,7.27e-37,68;UBERON:0001016,6.10e-33,89;UBERON:0003075,3.39e-31,82;UBERON:0007284,3.39e-31,82;UBERON:0002346,2.73e-29,86;UBERON:0003056,1.80e-26,61;UBERON:0010371,1.56e-22,104;UBERON:0007023,2.29e-21,114;UBERON:0010314,6.04e-17,132;UBERON:0000200,3.14e-16,6;UBERON:0004121,3.32e-14,171;UBERON:0000924,3.32e-14,171;UBERON:0006601,3.32e-14,171;UBERON:0000349,5.74e-14,5;UBERON:0001871,8.08e-14,6;UBERON:0001872,4.57e-13,5;UBERON:0011216,9.05e-11,223;UBERON:0002420,2.39e-10,9;UBERON:0007245,2.39e-10,9;UBERON:0010009,2.39e-10,9;UBERON:0010011,2.39e-10,9;UBERON:0000454,2.39e-10,9;UBERON:0000125,8.47e-10,9;UBERON:0002308,8.47e-10,9;UBERON:0000025,1.97e-09,192;UBERON:0002021,2.17e-09,5;UBERON:0001870,6.63e-09,3;UBERON:0002371,5.29e-08,76;UBERON:0004111,1.97e-07,240;UBERON:0001474,4.30e-07,82;UBERON:0003076,6.83e-07,15;UBERON:0003057,6.83e-07,15;UBERON:0001954,7.03e-07,2;UBERON:0003022,7.03e-07,2;UBERON:0002421,7.03e-07,2;UBERON:0002600,7.03e-07,2;UBERON:0002771,7.23e-07,2 | |||
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| |||
|short_description=p9@IDS | |||
}} |
Revision as of 07:18, 23 January 2014
Short description: | p9@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IDS_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 45bp_to_AK057191_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.46e-12 | 72 |
defensive cell | 1.75e-12 | 48 |
phagocyte | 1.75e-12 | 48 |
classical monocyte | 1.45e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-11 | 42 |
monopoietic cell | 2.09e-10 | 59 |
monocyte | 2.09e-10 | 59 |
monoblast | 2.09e-10 | 59 |
promonocyte | 2.09e-10 | 59 |
macrophage dendritic cell progenitor | 6.39e-10 | 61 |
neutrophil | 6.81e-09 | 3 |
myeloid lineage restricted progenitor cell | 7.74e-09 | 66 |
granulocyte monocyte progenitor cell | 1.22e-08 | 67 |