FFCP PHASE1:Hg19::chr12:2906593..2906597,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:2906593..2906597,+ to FFCP PHASE1:Hg19::chr12:2906593..2906597,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:2906593..2906597,+ | |||
|description=CAGE_peak_at_chr12:2906593..2906597,+ | |||
|id=chr12:2906593..2906597,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.36e-11;7!CL:0000586;2.36e-11;7!CL:0002262;2.60e-10;2!CL:1000398;2.60e-10;2!CL:0002363;2.60e-10;2!CL:0000182;5.39e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.97e-11,7;CL:0000586,1.97e-11,7;CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0000182,5.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.08e-19;1!CL:0000008;2.60e-10;2!UBERON:0009117;3.20e-08;10!UBERON:0005564;3.20e-08;10!UBERON:0003056;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.89e-08,22;DOID:2994,4.89e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-08!115;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.08e-19;1!UBERON:0001785;1.08e-19;1!UBERON:0002464;1.08e-19;1!UBERON:0004904;1.08e-19;1!UBERON:0001021;1.08e-19;1!UBERON:0002134;2.97e-19;1!UBERON:0005208;2.97e-19;1!UBERON:0004145;2.97e-19;1!UBERON:0005946;2.97e-19;1!UBERON:0005965;2.97e-19;1!UBERON:0002078;2.97e-19;1!UBERON:0003714;1.57e-10;2!UBERON:0005162;1.57e-10;2!UBERON:0000122;1.57e-10;2!UBERON:0001281;2.60e-10;2!UBERON:0003497;2.60e-10;2!UBERON:0003909;2.60e-10;2!UBERON:0003566;2.60e-10;2!UBERON:0002081;2.60e-10;2!UBERON:0002133;2.60e-10;2!UBERON:0003835;2.60e-10;2!UBERON:0001777;2.60e-10;2!UBERON:0000473;4.73e-10;8!UBERON:0010313;3.89e-08;10!UBERON:0003135;1.49e-07;11!UBERON:0003978;2.71e-07;3!UBERON:0004151;2.71e-07;3!UBERON:0000946;2.71e-07;3!UBERON:0001280;2.71e-07;3!UBERON:0004647;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.95e-20,1;UBERON:0001785,8.95e-20,1;UBERON:0002464,8.95e-20,1;UBERON:0004904,8.95e-20,1;UBERON:0001021,8.95e-20,1;UBERON:0003902,8.95e-20,1;UBERON:0005425,8.95e-20,1;UBERON:0002134,2.25e-19,1;UBERON:0005208,2.25e-19,1;UBERON:0005946,2.25e-19,1;UBERON:0005965,2.25e-19,1;UBERON:0002078,2.25e-19,1;UBERON:0003714,1.43e-10,2;UBERON:0005162,1.43e-10,2;UBERON:0000122,1.43e-10,2;UBERON:0002081,2.27e-10,2;UBERON:0002133,2.27e-10,2;UBERON:0010227,2.27e-10,2;UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0000473,4.03e-10,8;UBERON:0010313,4.19e-08,10;UBERON:0002342,4.19e-08,10;UBERON:0005062,4.19e-08,10;UBERON:0003135,1.33e-07,11;UBERON:0003978,2.47e-07,3;UBERON:0009751,2.47e-07,3;UBERON:0004151,2.47e-07,3;UBERON:0000946,2.47e-07,3;UBERON:0002523,2.47e-07,3;UBERON:0005983,2.47e-07,3;UBERON:0004145,2.47e-07,3;UBERON:0002165,2.47e-07,3;UBERON:0002062,2.47e-07,3;UBERON:0007280,2.47e-07,3;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0.6024118375565,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,1.23882548358041,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0.23056390438806,0.269272933229316,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0.0671834724867263,0,2.32991899054908,0,0,0,0.196854963029498,0,0,0.544813624446302,0.160753148465019,0.275078873194468,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0.221858103073705,0,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0.337884881306145,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0.157265941855896,0,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.826747186004736,0,0,0,0,1.23109871051734,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.118920090777569,0,0.329821550236287,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.407955318967927,1.87052183685892,2.57305718697566,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0.665756774185513,0,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0.6024118375565,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,1.23882548358041,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.361789315876224,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0.23056390438806,0.269272933229316,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0.0671834724867263,0,2.32991899054908,0,0,0,0.196854963029498,0,0,0.544813624446302,0.160753148465019,0.275078873194468,0.415440338029185,0,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0.250381861413,0,0.221858103073705,0,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0.337884881306145,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0.157265941855896,0,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0.826747186004736,0,0,0,0,1.23109871051734,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.118920090777569,0,0.329821550236287,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0.407955318967927,1.87052183685892,2.57305718697566,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0.665756774185513,0,0.320568492303233 | ||
|short_description=p@chr12:2906593..2906597,+ | |||
}} | }} |
Latest revision as of 07:58, 24 July 2015
Short description: | p@chr12:2906593..2906597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2906593..2906597, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.97e-11 | 7 |
germ cell | 1.97e-11 | 7 |
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
keratocyte | 3.58e-10 | 2 |
migratory cranial neural crest cell | 3.58e-10 | 2 |
hepatocyte | 5.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.89e-08 | 22 |
germ cell cancer | 4.89e-08 | 22 |