FFCP PHASE1:Hg19::chr1:212732307..212732355,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:212732307..212732355,-
|short_description=p1@uc001hje.2
|description=CAGE_peak_1_at_uc001hje.2_5end
|association_with_transcript=-294bp_to_uc001hje.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-294bp_to_uc001hje.2_5end | |||
|cluster_id=chr1:212732307..212732355,- | |||
|coexpression_cluster_id=C2564 | |||
|description=CAGE_peak_1_at_uc001hje.2_5end | |||
|id=chr1:212732307..212732355,- | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-25!42;CL:0000860!2.80e-23!45;CL:0000557!7.00e-17!71;CL:0002009!4.68e-16!65;CL:0002194!1.05e-15!63;CL:0000576!1.05e-15!63;CL:0000040!1.05e-15!63;CL:0000559!1.05e-15!63;CL:0000766!2.25e-15!76;CL:0000839!1.32e-14!70;CL:0002087!7.32e-07!119;CL:0000738!9.16e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-28;33!CL:0002057;3.27e-28;33!CL:0000576;1.18e-20;48!CL:0000473;2.25e-19;39!CL:0000234;2.25e-19;39!CL:0000766;5.37e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-38,42;CL:0002057,2.17e-38,42;CL:0000473,2.14e-32,48;CL:0000234,2.14e-32,48;CL:0000557,4.80e-25,67;CL:0000766,3.76e-24,72;CL:0002194,1.97e-23,59;CL:0000576,1.97e-23,59;CL:0000040,1.97e-23,59;CL:0000559,1.97e-23,59;CL:0002009,2.86e-23,61;CL:0000839,3.47e-23,66;CL:0000763,4.39e-14,108;CL:0000049,4.39e-14,108;CL:0002031,1.15e-08,120;CL:0000738,1.34e-08,136;CL:0002393,2.31e-08,9;CL:0002397,2.31e-08,9;CL:0002087,3.02e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.56e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.15e-20!57;UBERON:0005068!7.15e-20!57;UBERON:0006241!7.15e-20!57;UBERON:0007135!7.15e-20!57;UBERON:0007023!2.68e-16!115;UBERON:0002371!6.31e-16!80;UBERON:0002616!7.55e-16!59;UBERON:0001017!3.65e-15!82;UBERON:0002390!4.34e-15!102;UBERON:0003061!4.34e-15!102;UBERON:0002780!2.57e-14!41;UBERON:0001890!2.57e-14!41;UBERON:0006240!2.57e-14!41;UBERON:0002193!3.56e-14!112;UBERON:0000955!5.24e-14!69;UBERON:0006238!5.24e-14!69;UBERON:0001474!7.72e-14!86;UBERON:0005743!9.05e-14!86;UBERON:0003080!2.22e-13!42;UBERON:0000073!5.58e-13!94;UBERON:0001016!5.58e-13!94;UBERON:0002346!2.66e-12!90;UBERON:0003075!2.93e-12!86;UBERON:0007284!2.93e-12!86;UBERON:0002405!4.27e-12!115;UBERON:0002020!8.65e-12!34;UBERON:0003528!8.65e-12!34;UBERON:0000062!1.12e-11!511;UBERON:0001893!1.67e-11!34;UBERON:0002791!3.70e-11!33;UBERON:0004765!6.30e-11!101;UBERON:0001434!6.30e-11!101;UBERON:0001869!2.07e-10!32;UBERON:0003056!3.55e-09!61;UBERON:0000922!4.14e-08!612;UBERON:0000468!4.34e-08!659;UBERON:0003076!6.16e-08!15;UBERON:0003057!6.16e-08!15;UBERON:0000923!3.07e-07!604;UBERON:0005291!3.07e-07!604;UBERON:0006598!3.07e-07!604;UBERON:0002532!3.07e-07!604;UBERON:0002050!3.16e-07!605;UBERON:0005423!3.16e-07!605;UBERON:0000956!4.73e-07!25;UBERON:0000203!4.73e-07!25;UBERON:0004732!5.33e-07!13;UBERON:0002308!7.31e-07!9;UBERON:0000125!7.31e-07!9;UBERON:0000467!8.10e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.41e-15;53!UBERON:0002616;3.41e-15;53!UBERON:0003528;7.06e-14;34!UBERON:0002020;7.06e-14;34!UBERON:0002780;2.63e-13;41!UBERON:0001890;2.63e-13;41!UBERON:0001893;6.91e-13;34!UBERON:0002791;8.86e-13;32!UBERON:0001869;4.28e-12;32!UBERON:0000125;1.19e-09;9!UBERON:0002308;1.19e-09;9!UBERON:0004732;4.89e-09;13!UBERON:0000956;6.15e-09;25!UBERON:0000203;6.15e-09;25!UBERON:0000955;7.92e-09;68!UBERON:0002619;8.65e-09;22!UBERON:0001017;3.28e-08;75!UBERON:0004733;3.62e-08;12!UBERON:0002028;3.62e-08;12!UBERON:0009663;1.03e-07;7!UBERON:0001950;1.49e-07;20!UBERON:0001016;1.85e-07;83!UBERON:0002420;3.53e-07;9!UBERON:0007245;3.53e-07;9!UBERON:0010009;3.53e-07;9!UBERON:0010011;3.53e-07;9!UBERON:0000454;3.53e-07;9 | |||
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| ||
|short_description=p1@uc001hje.2 | |||
}} | }} |
Latest revision as of 03:39, 28 July 2015
Short description: | p1@uc001hje.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001hje.2_5end |
Coexpression cluster: | C2564_optic_CD14_spinal_corpus_thalamus_substantia_locus |
Association with transcript: | -294bp_to_uc001hje.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.17e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-38 | 42 |
defensive cell | 2.14e-32 | 48 |
phagocyte | 2.14e-32 | 48 |
granulocyte monocyte progenitor cell | 4.80e-25 | 67 |
myeloid leukocyte | 3.76e-24 | 72 |
monopoietic cell | 1.97e-23 | 59 |
monocyte | 1.97e-23 | 59 |
monoblast | 1.97e-23 | 59 |
promonocyte | 1.97e-23 | 59 |
macrophage dendritic cell progenitor | 2.86e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.47e-23 | 66 |
myeloid cell | 4.39e-14 | 108 |
common myeloid progenitor | 4.39e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
leukocyte | 1.34e-08 | 136 |
intermediate monocyte | 2.31e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.31e-08 | 9 |
nongranular leukocyte | 3.02e-08 | 115 |