FFCP PHASE1:Hg19::chr22:50523843..50523865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23209 | |EntrezGene=23209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |HGNC=17082 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z659,B7Z2T9 | |UniProt=B7Z659,B7Z2T9 | ||
|association_with_transcript=0bp_to_ENST00000431262,ENST00000535444_5end | |association_with_transcript=0bp_to_ENST00000431262,ENST00000535444_5end | ||
|cluster_id=chr22:50523843..50523865,- | |||
|description=CAGE_peak_1_at_MLC1_5end | |description=CAGE_peak_1_at_MLC1_5end | ||
|id=chr22:50523843..50523865,- | |id=chr22:50523843..50523865,- | ||
|ontology_enrichment_celltype=CL:0000763!9.93e-29!112;CL:0000049!9.93e-29!112;CL:0000037!3.25e-24!172;CL:0000566!3.25e-24!172;CL:0002032!2.11e-23!165;CL:0000837!2.11e-23!165;CL:0000988!1.97e-21!182;CL:0002057!7.42e-18!42;CL:0000860!1.12e-15!45;CL:0000839!6.15e-15!70;CL:0000766!2.25e-14!76;CL:0000557!5.12e-14!71;CL:0002194!1.37e-12!63;CL:0000576!1.37e-12!63;CL:0000040!1.37e-12!63;CL:0000559!1.37e-12!63;CL:0002009!9.74e-12!65;CL:0002031!5.73e-11!124;CL:0000738!1.67e-10!140;CL:0002087!2.59e-10!119 | |ontology_enrichment_celltype=CL:0000763!9.93e-29!112;CL:0000049!9.93e-29!112;CL:0000037!3.25e-24!172;CL:0000566!3.25e-24!172;CL:0002032!2.11e-23!165;CL:0000837!2.11e-23!165;CL:0000988!1.97e-21!182;CL:0002057!7.42e-18!42;CL:0000860!1.12e-15!45;CL:0000839!6.15e-15!70;CL:0000766!2.25e-14!76;CL:0000557!5.12e-14!71;CL:0002194!1.37e-12!63;CL:0000576!1.37e-12!63;CL:0000040!1.37e-12!63;CL:0000559!1.37e-12!63;CL:0002009!9.74e-12!65;CL:0002031!5.73e-11!124;CL:0000738!1.67e-10!140;CL:0002087!2.59e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000763;2.12e-11;100!CL:0000576;5.09e-10;48!CL:0000860;3.42e-09;33!CL:0002057;3.42e-09;33!CL:0000766;2.69e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.06e-27,108;CL:0000049,1.06e-27,108;CL:0000037,8.72e-24,168;CL:0002032,1.87e-22,161;CL:0000837,1.87e-22,161;CL:0000988,7.63e-22,177;CL:0000860,1.15e-15,42;CL:0002057,1.15e-15,42;CL:0000473,2.38e-13,48;CL:0000234,2.38e-13,48;CL:0000766,3.81e-13,72;CL:0000839,1.47e-12,66;CL:0000557,2.07e-12,67;CL:0002194,9.05e-12,59;CL:0000576,9.05e-12,59;CL:0000040,9.05e-12,59;CL:0000559,9.05e-12,59;CL:0002009,4.71e-11,61;CL:0002087,8.48e-10,115;CL:0000738,1.01e-09,136;CL:0002031,2.56e-09,120;CL:0002393,5.78e-08,9;CL:0002397,5.78e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-12;42!CL:0000049;6.31e-10;108!UBERON:0006601;1.83e-08;82 | |||
|ontology_enrichment_disease=DOID:8692!8.69e-21!31;DOID:1240!1.96e-20!39;DOID:2531!9.38e-14!51;DOID:0060083!9.38e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.55e-22;31!DOID:1240;8.86e-18;39!DOID:2531;3.47e-11;51!DOID:0060083;3.47e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.52e-24,39;DOID:8692,2.77e-23,31;DOID:2531,1.81e-16,51;DOID:0060083,1.81e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-36!57;UBERON:0005068!2.37e-36!57;UBERON:0006241!2.37e-36!57;UBERON:0007135!2.37e-36!57;UBERON:0001017!5.70e-35!82;UBERON:0005743!4.73e-33!86;UBERON:0007023!2.57e-32!115;UBERON:0002616!5.34e-31!59;UBERON:0000073!1.89e-29!94;UBERON:0001016!1.89e-29!94;UBERON:0000955!2.13e-29!69;UBERON:0006238!2.13e-29!69;UBERON:0002780!1.34e-27!41;UBERON:0001890!1.34e-27!41;UBERON:0006240!1.34e-27!41;UBERON:0003080!1.63e-26!42;UBERON:0001893!1.25e-25!34;UBERON:0002020!1.36e-25!34;UBERON:0003528!1.36e-25!34;UBERON:0002791!5.94e-25!33;UBERON:0001869!3.51e-24!32;UBERON:0002346!1.11e-23!90;UBERON:0003075!1.86e-21!86;UBERON:0007284!1.86e-21!86;UBERON:0000956!1.27e-18!25;UBERON:0000203!1.27e-18!25;UBERON:0002390!6.64e-17!102;UBERON:0003061!6.64e-17!102;UBERON:0002619!1.99e-16!22;UBERON:0003056!5.00e-15!61;UBERON:0001950!1.04e-14!20;UBERON:0002193!1.63e-14!112;UBERON:0002371!1.87e-12!80;UBERON:0001474!2.56e-12!86;UBERON:0000153!5.10e-12!129;UBERON:0007811!5.10e-12!129;UBERON:0000033!3.94e-11!123;UBERON:0003076!8.15e-11!15;UBERON:0003057!8.15e-11!15;UBERON:0000924!3.76e-10!173;UBERON:0006601!3.76e-10!173;UBERON:0004765!4.18e-09!101;UBERON:0001434!4.18e-09!101;UBERON:0004121!7.39e-09!169;UBERON:0002420!1.31e-08!9;UBERON:0007245!1.31e-08!9;UBERON:0010009!1.31e-08!9;UBERON:0010011!1.31e-08!9;UBERON:0000454!1.31e-08!9;UBERON:0004733!2.00e-08!12;UBERON:0002028!2.00e-08!12;UBERON:0007277!2.00e-08!12;UBERON:0002308!2.00e-08!9;UBERON:0000125!2.00e-08!9;UBERON:0002405!9.42e-08!115;UBERON:0004732!1.89e-07!13;UBERON:0009663!5.62e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.20e-29;34!UBERON:0003528;9.53e-29;34!UBERON:0002020;9.53e-29;34!UBERON:0001869;1.26e-28;32!UBERON:0002791;1.43e-28;32!UBERON:0000073;1.08e-25;53!UBERON:0002616;1.08e-25;53!UBERON:0002780;4.53e-25;41!UBERON:0001890;4.53e-25;41!UBERON:0000956;2.90e-24;25!UBERON:0000203;2.90e-24;25!UBERON:0002619;2.30e-21;22!UBERON:0001950;4.28e-19;20!UBERON:0000955;3.17e-18;68!UBERON:0001017;6.84e-18;75!UBERON:0001016;2.72e-15;83!UBERON:0002420;7.83e-11;9!UBERON:0007245;7.83e-11;9!UBERON:0010009;7.83e-11;9!UBERON:0010011;7.83e-11;9!UBERON:0000454;7.83e-11;9!UBERON:0004733;8.04e-11;12!UBERON:0002028;8.04e-11;12!UBERON:0000125;1.35e-10;9!UBERON:0002308;1.35e-10;9!UBERON:0004732;1.02e-09;13!UBERON:0009663;1.09e-08;7!UBERON:0007023;2.73e-08;114!UBERON:0002680;9.75e-08;9!UBERON:0001895;9.75e-08;9!UBERON:0002298;1.74e-07;6!UBERON:0000200;2.74e-07;6!UBERON:0000349;4.65e-07;5 | |||
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| ||
|short_description=p1@MLC1 | |short_description=p1@MLC1 | ||
}} | }} |
Latest revision as of 18:30, 15 September 2015
Short description: | p1@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431262, ENST00000535444_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | B7Z659B7Z2T9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.06e-27 | 108 |
common myeloid progenitor | 1.06e-27 | 108 |
hematopoietic stem cell | 8.72e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.87e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-22 | 161 |
hematopoietic cell | 7.63e-22 | 177 |
classical monocyte | 1.15e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-15 | 42 |
defensive cell | 2.38e-13 | 48 |
phagocyte | 2.38e-13 | 48 |
myeloid leukocyte | 3.81e-13 | 72 |
myeloid lineage restricted progenitor cell | 1.47e-12 | 66 |
granulocyte monocyte progenitor cell | 2.07e-12 | 67 |
monopoietic cell | 9.05e-12 | 59 |
monocyte | 9.05e-12 | 59 |
monoblast | 9.05e-12 | 59 |
promonocyte | 9.05e-12 | 59 |
macrophage dendritic cell progenitor | 4.71e-11 | 61 |
nongranular leukocyte | 8.48e-10 | 115 |
leukocyte | 1.01e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 2.56e-09 | 120 |
intermediate monocyte | 5.78e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.78e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.52e-24 | 39 |
myeloid leukemia | 2.77e-23 | 31 |
hematologic cancer | 1.81e-16 | 51 |
immune system cancer | 1.81e-16 | 51 |