FFCP PHASE1:Hg19::chr19:13135439..13135446,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:13135439..13135446,+ to FFCP PHASE1:Hg19::chr19:13135439..13135446,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4784 | |EntrezGene=4784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |HGNC=7788 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5Z3 | |UniProt=F5H5Z3 | ||
|association_with_transcript=44bp_to_ENST00000438869,uc010xmx.1_5end | |||
|cluster_id=chr19:13135439..13135446,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_29_at_NFIX_5end | |||
|id=chr19:13135439..13135446,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.35e-14;82!UBERON:0005425;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-57!57;UBERON:0005068!1.40e-57!57;UBERON:0006241!1.40e-57!57;UBERON:0007135!1.40e-57!57;UBERON:0001017!1.59e-52!82;UBERON:0002616!1.51e-49!59;UBERON:0005743!2.08e-49!86;UBERON:0001893!1.64e-48!34;UBERON:0002020!3.66e-48!34;UBERON:0003528!3.66e-48!34;UBERON:0002780!1.06e-47!41;UBERON:0001890!1.06e-47!41;UBERON:0006240!1.06e-47!41;UBERON:0000073!2.34e-47!94;UBERON:0001016!2.34e-47!94;UBERON:0000955!9.42e-47!69;UBERON:0006238!9.42e-47!69;UBERON:0002791!1.97e-46!33;UBERON:0003080!2.45e-46!42;UBERON:0001869!7.82e-45!32;UBERON:0003075!4.12e-41!86;UBERON:0007284!4.12e-41!86;UBERON:0007023!2.52e-39!115;UBERON:0002346!1.17e-38!90;UBERON:0000956!7.70e-36!25;UBERON:0000203!7.70e-36!25;UBERON:0002619!1.96e-34!22;UBERON:0001950!9.05e-31!20;UBERON:0003056!1.27e-30!61;UBERON:0000033!1.34e-28!123;UBERON:0004121!1.20e-27!169;UBERON:0000924!1.25e-26!173;UBERON:0006601!1.25e-26!173;UBERON:0000153!1.32e-26!129;UBERON:0007811!1.32e-26!129;UBERON:0000025!2.17e-15!194;UBERON:0004111!3.47e-15!241;UBERON:0000475!7.91e-14!365;UBERON:0000200!8.82e-14!6;UBERON:0002308!1.52e-13!9;UBERON:0000125!1.52e-13!9;UBERON:0003076!3.51e-12!15;UBERON:0003057!3.51e-12!15;UBERON:0004732!1.00e-11!13;UBERON:0000477!1.20e-11!286;UBERON:0002021!1.48e-11!5;UBERON:0002420!3.83e-10!9;UBERON:0007245!3.83e-10!9;UBERON:0010009!3.83e-10!9;UBERON:0010011!3.83e-10!9;UBERON:0000454!3.83e-10!9;UBERON:0004733!4.71e-10!12;UBERON:0002028!4.71e-10!12;UBERON:0007277!4.71e-10!12;UBERON:0009663!4.86e-10!7;UBERON:0000483!5.70e-10!309;UBERON:0000119!1.00e-09!312;UBERON:0001871!2.93e-09!7;UBERON:0000064!3.65e-09!219;UBERON:0002298!3.81e-09!8;UBERON:0001872!6.34e-08!5;UBERON:0002680!6.46e-08!9;UBERON:0001895!6.46e-08!9;UBERON:0010092!6.46e-08!9;UBERON:0000467!7.00e-08!625;UBERON:0000480!7.85e-08!626;UBERON:0002771!1.56e-07!3;UBERON:0000062!2.06e-07!511;UBERON:0000468!2.85e-07!659;UBERON:0000988!3.59e-07!3;UBERON:0000349!4.90e-07!5;UBERON:0006331!5.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.87e-80;20!UBERON:0002619;6.02e-73;22!UBERON:0001893;1.83e-67;34!UBERON:0000956;3.12e-64;25!UBERON:0000203;3.12e-64;25!UBERON:0001869;4.65e-64;32!UBERON:0003528;3.53e-59;34!UBERON:0002020;3.53e-59;34!UBERON:0002791;5.23e-56;32!UBERON:0002780;8.41e-48;41!UBERON:0001890;8.41e-48;41!UBERON:0000200;4.60e-46;6!UBERON:0000073;2.59e-38;53!UBERON:0002616;2.59e-38;53!UBERON:0001872;1.80e-25;5!UBERON:0002021;3.70e-25;5!UBERON:0001870;4.74e-24;3!UBERON:0001017;8.33e-24;75!UBERON:0000955;3.12e-23;68!UBERON:0001016;1.13e-18;83!UBERON:0002702;1.66e-16;2!UBERON:0002771;4.07e-16;2!UBERON:0005162;4.07e-16;2!UBERON:0000122;4.07e-16;2!UBERON:0007023;2.42e-13;114!UBERON:0000988;4.65e-11;3!UBERON:0001871;1.80e-10;6!UBERON:0004732;1.59e-09;13!UBERON:0002902;1.74e-09;1!UBERON:0009899;1.74e-09;1!UBERON:0007190;1.74e-09;1!UBERON:0002581;2.60e-09;1!UBERON:0003112;2.60e-09;1!UBERON:0011158;2.60e-09;1!UBERON:0003128;2.60e-09;1!UBERON:0001703;2.60e-09;1!UBERON:0002241;2.60e-09;1!UBERON:0001882;6.46e-09;1!UBERON:0002022;6.46e-09;1!UBERON:0002336;6.46e-09;1!UBERON:0000941;6.46e-09;1!UBERON:0001785;6.46e-09;1!UBERON:0002464;6.46e-09;1!UBERON:0004904;6.46e-09;1!UBERON:0011215;6.46e-09;1!UBERON:0001018;6.46e-09;1!UBERON:0001021;6.46e-09;1!UBERON:0002473;6.46e-09;1!UBERON:0005340;6.46e-09;1!UBERON:0003544;6.46e-09;1!UBERON:0005970;6.46e-09;1!UBERON:0002316;6.46e-09;1!UBERON:0001020;6.46e-09;1!UBERON:0005403;6.46e-09;1!UBERON:0002437;6.46e-09;1!UBERON:0011216;1.17e-08;132!UBERON:0002680;3.96e-08;9!UBERON:0000125;3.96e-08;9!UBERON:0002308;3.96e-08;9!UBERON:0001895;3.96e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.06e-80,20;UBERON:0001893,2.00e-76,34;UBERON:0002619,3.39e-73,22;UBERON:0001869,5.90e-73,32;UBERON:0000073,1.42e-71,53;UBERON:0002616,1.42e-71,53;UBERON:0002780,4.66e-70,41;UBERON:0001890,4.66e-70,41;UBERON:0003080,4.66e-70,41;UBERON:0006240,4.66e-70,41;UBERON:0003528,3.30e-68,34;UBERON:0002020,3.30e-68,34;UBERON:0001049,1.28e-67,56;UBERON:0005068,1.28e-67,56;UBERON:0006241,1.28e-67,56;UBERON:0007135,1.28e-67,56;UBERON:0002791,9.49e-65,32;UBERON:0000956,1.88e-64,25;UBERON:0000203,1.88e-64,25;UBERON:0000955,2.03e-59,68;UBERON:0006238,2.03e-59,68;UBERON:0003056,2.71e-51,61;UBERON:0003075,1.52e-49,82;UBERON:0007284,1.52e-49,82;UBERON:0001017,1.56e-49,81;UBERON:0001016,2.48e-48,89;UBERON:0002346,4.27e-47,86;UBERON:0000200,4.46e-46,6;UBERON:0010371,2.22e-38,104;UBERON:0007023,2.50e-38,114;UBERON:0010314,2.48e-32,132;UBERON:0001872,9.37e-26,5;UBERON:0002021,1.76e-25,5;UBERON:0001870,4.95e-24,3;UBERON:0004121,9.66e-24,171;UBERON:0000924,9.66e-24,171;UBERON:0006601,9.66e-24,171;UBERON:0011216,5.18e-19,223;UBERON:0000025,2.62e-17,192;UBERON:0002702,1.37e-16,2;UBERON:0002771,5.14e-16,2;UBERON:0005162,6.47e-16,2;UBERON:0000122,6.47e-16,2;UBERON:0004111,4.51e-13,240;UBERON:0000988,8.56e-11,3;UBERON:0000483,1.64e-10,306;UBERON:0001871,2.05e-10,6;UBERON:0000119,2.27e-10,309;UBERON:0002902,1.74e-09,1;UBERON:0009899,1.74e-09,1;UBERON:0004732,1.78e-09,13;UBERON:0007190,1.89e-09,1;UBERON:0002581,2.22e-09,1;UBERON:0003112,3.05e-09,1;UBERON:0011158,3.05e-09,1;UBERON:0003128,3.05e-09,1;UBERON:0001703,3.05e-09,1;UBERON:0002241,3.05e-09,1;UBERON:0004761,3.05e-09,1;UBERON:0009617,3.05e-09,1;UBERON:0001882,5.75e-09,1;UBERON:0005403,5.75e-09,1;UBERON:0000941,6.72e-09,1;UBERON:0001785,6.72e-09,1;UBERON:0002464,6.72e-09,1;UBERON:0004904,6.72e-09,1;UBERON:0001021,6.72e-09,1;UBERON:0003902,6.72e-09,1;UBERON:0005425,6.72e-09,1;UBERON:0002336,9.91e-09,1;UBERON:0011215,9.91e-09,1;UBERON:0001018,9.91e-09,1;UBERON:0002473,9.91e-09,1;UBERON:0005340,9.91e-09,1;UBERON:0003544,9.91e-09,1;UBERON:0005970,9.91e-09,1;UBERON:0002316,9.91e-09,1;UBERON:0001020,9.91e-09,1;UBERON:0002437,9.91e-09,1;UBERON:0002022,1.07e-08,1;UBERON:0000125,4.12e-08,9;UBERON:0002308,4.12e-08,9;UBERON:0002680,4.43e-08,9;UBERON:0001895,4.43e-08,9;UBERON:0010092,4.43e-08,9 | |||
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| ||
|short_description=p29@NFIX | |||
}} | }} |
Latest revision as of 23:11, 15 September 2015
Short description: | p29@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_NFIX_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 44bp_to_ENST00000438869, uc010xmx.1_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | F5H5Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data