FFCP PHASE1:Hg19::chr10:105253661..105253686,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt=B4DS86,O76050 | |UniProt=B4DS86,O76050 | ||
|association_with_transcript=-48bp_to_NM_004210,uc001kxh.2_5end | |||
|cluster_id=chr10:105253661..105253686,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_NEURL_5end | |||
|id=chr10:105253661..105253686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.00e-18;3!UBERON:0006601;4.32e-17;82!UBERON:0010122;4.98e-13;2!UBERON:0006222;9.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.03e-81!57;UBERON:0005068!1.03e-81!57;UBERON:0006241!1.03e-81!57;UBERON:0007135!1.03e-81!57;UBERON:0002616!2.74e-71!59;UBERON:0001893!7.63e-65!34;UBERON:0000955!9.13e-65!69;UBERON:0006238!9.13e-65!69;UBERON:0002020!9.85e-65!34;UBERON:0003528!9.85e-65!34;UBERON:0002780!1.97e-64!41;UBERON:0001890!1.97e-64!41;UBERON:0006240!1.97e-64!41;UBERON:0001017!1.13e-63!82;UBERON:0005743!6.96e-63!86;UBERON:0003080!1.06e-62!42;UBERON:0002791!2.60e-62!33;UBERON:0001869!9.59e-61!32;UBERON:0003075!9.63e-61!86;UBERON:0007284!9.63e-61!86;UBERON:0000073!3.37e-58!94;UBERON:0001016!3.37e-58!94;UBERON:0002346!1.75e-57!90;UBERON:0002619!4.63e-55!22;UBERON:0001950!6.32e-50!20;UBERON:0000956!6.30e-48!25;UBERON:0000203!6.30e-48!25;UBERON:0007023!1.08e-44!115;UBERON:0003056!4.76e-43!61;UBERON:0000033!1.79e-38!123;UBERON:0000153!4.17e-36!129;UBERON:0007811!4.17e-36!129;UBERON:0004121!3.22e-31!169;UBERON:0000924!3.44e-30!173;UBERON:0006601!3.44e-30!173;UBERON:0000025!6.83e-20!194;UBERON:0003076!3.62e-19!15;UBERON:0003057!3.62e-19!15;UBERON:0002420!1.31e-18!9;UBERON:0007245!1.31e-18!9;UBERON:0010009!1.31e-18!9;UBERON:0010011!1.31e-18!9;UBERON:0000454!1.31e-18!9;UBERON:0002308!7.78e-18!9;UBERON:0000125!7.78e-18!9;UBERON:0001871!6.41e-17!7;UBERON:0000200!8.12e-17!6;UBERON:0004733!1.36e-16!12;UBERON:0002028!1.36e-16!12;UBERON:0007277!1.36e-16!12;UBERON:0004111!2.77e-15!241;UBERON:0004732!3.59e-15!13;UBERON:0000064!4.50e-15!219;UBERON:0002298!6.91e-15!8;UBERON:0000349!1.66e-14!5;UBERON:0001872!2.43e-14!5;UBERON:0002021!2.71e-14!5;UBERON:0009663!1.44e-13!7;UBERON:0000369!4.34e-12!4;UBERON:0002435!4.34e-12!4;UBERON:0000204!4.34e-12!4;UBERON:0010082!4.34e-12!4;UBERON:0000483!6.05e-12!309;UBERON:0000119!1.05e-11!312;UBERON:0000477!1.13e-11!286;UBERON:0000475!1.43e-10!365;UBERON:0002680!2.10e-10!9;UBERON:0001895!2.10e-10!9;UBERON:0010092!2.10e-10!9;UBERON:0005383!1.69e-09!3;UBERON:0005382!1.69e-09!3;UBERON:0002771!2.56e-09!3;UBERON:0001896!1.89e-08!3;UBERON:0005290!1.89e-08!3;UBERON:0010096!1.89e-08!3;UBERON:0000988!1.94e-08!3;UBERON:0000062!3.00e-08!511;UBERON:0006331!5.78e-08!3;UBERON:0001873!6.31e-07!2;UBERON:0010122!6.31e-07!2;UBERON:0000481!6.87e-07!347;UBERON:0001876!7.26e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.18e-87;22!UBERON:0001869;3.63e-86;32!UBERON:0001893;1.02e-80;34!UBERON:0002791;7.75e-80;32!UBERON:0000956;1.07e-76;25!UBERON:0000203;1.07e-76;25!UBERON:0001950;1.57e-76;20!UBERON:0003528;1.08e-73;34!UBERON:0002020;1.08e-73;34!UBERON:0002780;1.90e-61;41!UBERON:0001890;1.90e-61;41!UBERON:0000073;7.92e-49;53!UBERON:0002616;7.92e-49;53!UBERON:0000955;4.97e-37;68!UBERON:0000200;1.12e-33;6!UBERON:0001017;2.65e-32;75!UBERON:0000349;6.95e-29;5!UBERON:0000369;4.46e-24;4!UBERON:0002435;4.46e-24;4!UBERON:0000204;4.46e-24;4!UBERON:0002420;4.40e-23;9!UBERON:0007245;4.40e-23;9!UBERON:0010009;4.40e-23;9!UBERON:0010011;4.40e-23;9!UBERON:0000454;4.40e-23;9!UBERON:0001016;6.36e-23;83!UBERON:0001871;9.69e-21;6!UBERON:0002021;3.85e-19;5!UBERON:0001872;4.22e-19;5!UBERON:0005383;1.47e-18;3!UBERON:0005382;1.47e-18;3!UBERON:0001870;1.27e-17;3!UBERON:0007023;8.08e-17;114!UBERON:0009663;7.81e-14;7!UBERON:0001873;4.98e-13;2!UBERON:0002771;1.44e-12;2!UBERON:0001876;1.44e-12;2!UBERON:0001954;1.44e-12;2!UBERON:0003022;1.44e-12;2!UBERON:0002421;1.44e-12;2!UBERON:0002600;1.44e-12;2!UBERON:0002702;4.30e-12;2!UBERON:0011216;5.50e-11;132!UBERON:0000125;8.74e-11;9!UBERON:0002308;8.74e-11;9!UBERON:0002680;2.32e-10;9!UBERON:0001895;2.32e-10;9!UBERON:0002037;3.60e-09;6!UBERON:0010314;5.95e-08;132!UBERON:0004733;8.52e-08;12!UBERON:0002028;8.52e-08;12!UBERON:0002902;1.86e-07;1!UBERON:0002022;1.86e-07;1!UBERON:0009899;1.86e-07;1!UBERON:0002581;3.01e-07;1!UBERON:0001882;3.01e-07;1!UBERON:0001874;3.01e-07;1!UBERON:0005403;3.01e-07;1!UBERON:0004732;3.34e-07;13!UBERON:0007190;5.45e-07;1!UBERON:0003112;9.18e-07;1!UBERON:0011158;9.18e-07;1!UBERON:0003128;9.18e-07;1!UBERON:0001703;9.18e-07;1!UBERON:0002241;9.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.94e-97,32;UBERON:0000073,3.60e-91,53;UBERON:0002616,3.60e-91,53;UBERON:0001893,3.91e-91,34;UBERON:0002791,6.30e-89,32;UBERON:0002780,1.49e-88,41;UBERON:0001890,1.49e-88,41;UBERON:0003080,1.49e-88,41;UBERON:0006240,1.49e-88,41;UBERON:0002619,1.28e-87,22;UBERON:0001049,4.42e-86,56;UBERON:0005068,4.42e-86,56;UBERON:0006241,4.42e-86,56;UBERON:0007135,4.42e-86,56;UBERON:0003528,1.42e-83,34;UBERON:0002020,1.42e-83,34;UBERON:0000955,5.98e-79,68;UBERON:0006238,5.98e-79,68;UBERON:0000956,4.77e-77,25;UBERON:0000203,4.77e-77,25;UBERON:0001950,5.30e-77,20;UBERON:0001017,5.31e-70,81;UBERON:0001016,1.37e-62,89;UBERON:0003056,2.59e-58,61;UBERON:0003075,2.30e-57,82;UBERON:0007284,2.30e-57,82;UBERON:0002346,1.81e-54,86;UBERON:0007023,2.55e-49,114;UBERON:0010371,3.69e-44,104;UBERON:0010314,3.66e-36,132;UBERON:0000200,6.67e-34,6;UBERON:0004121,2.49e-30,171;UBERON:0000924,2.49e-30,171;UBERON:0006601,2.49e-30,171;UBERON:0000349,5.52e-29,5;UBERON:0011216,3.56e-25,223;UBERON:0000369,7.58e-24,4;UBERON:0002435,7.58e-24,4;UBERON:0000204,7.58e-24,4;UBERON:0010082,7.58e-24,4;UBERON:0000025,4.20e-23,192;UBERON:0002420,4.41e-23,9;UBERON:0007245,4.41e-23,9;UBERON:0010009,4.41e-23,9;UBERON:0010011,4.41e-23,9;UBERON:0000454,4.41e-23,9;UBERON:0001871,5.23e-21,6;UBERON:0002021,3.68e-19,5;UBERON:0001872,3.85e-19,5;UBERON:0005383,2.36e-18,3;UBERON:0005382,2.36e-18,3;UBERON:0001870,1.13e-17,3;UBERON:0004111,2.56e-17,240;UBERON:0009663,1.05e-13,7;UBERON:0001873,6.32e-13,2;UBERON:0010122,6.32e-13,2;UBERON:0001876,8.49e-13,2;UBERON:0002771,1.07e-12,2;UBERON:0001954,1.81e-12,2;UBERON:0003022,1.81e-12,2;UBERON:0002421,1.81e-12,2;UBERON:0002600,1.81e-12,2;UBERON:0000483,2.67e-12,306;UBERON:0002702,3.84e-12,2;UBERON:0000119,4.02e-12,309;UBERON:0000125,1.10e-10,9;UBERON:0002308,1.10e-10,9;UBERON:0002680,2.38e-10,9;UBERON:0001895,2.38e-10,9;UBERON:0010092,2.38e-10,9;UBERON:0002037,3.41e-09,6;UBERON:0006215,3.41e-09,6;UBERON:0004733,8.68e-08,12;UBERON:0002028,8.68e-08,12;UBERON:0007277,8.68e-08,12;UBERON:0002022,1.55e-07,1;UBERON:0002902,1.65e-07,1;UBERON:0009899,1.65e-07,1;UBERON:0002581,2.84e-07,1;UBERON:0001882,3.20e-07,1;UBERON:0005403,3.20e-07,1;UBERON:0004732,3.40e-07,13;UBERON:0001874,3.82e-07,1;UBERON:0007190,5.14e-07,1;UBERON:0003112,9.73e-07,1;UBERON:0011158,9.73e-07,1;UBERON:0003128,9.73e-07,1;UBERON:0001703,9.73e-07,1;UBERON:0002241,9.73e-07,1;UBERON:0004761,9.73e-07,1;UBERON:0009617,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,2.13366625772258,0,0,0,0,0,0,0,0,0,0,4.42870692906919,3.25610384288601,4.5774520895125,2.54332297841817,1.47773809476774,1.31631238292384,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,1.40558667435203,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,3.48209377757333,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,2.31545790389679,0,0,0,0,0,4.85996453264197,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,1.77213635993397,3.66078794705889,2.3786276834235,0.573409195690071,0.443716206147409,0.807253238237985,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,3.40414893011235,7.08482881627925,2.07524016774297,2.87162909937057,0.504143392443436,4.77185042003103,1.45328081068666,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,2.4988906308806,4.68646859168308,2.27355476151302,3.80494861163441,0.546974809018219,0,0,0,0,4.28561468702629,0,0,0,0,0,0,2.24300118823545,3.485956998831,0,0,0,3.14231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,4.69141282317311,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.535928260312357,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,2.13366625772258,0,0,0,0,0,0,0,0,0,0,4.42870692906919,3.25610384288601,4.5774520895125,2.54332297841817,1.47773809476774,1.31631238292384,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,1.40558667435203,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,3.48209377757333,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,2.31545790389679,0,0,0,0,0,4.85996453264197,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,1.77213635993397,3.66078794705889,2.3786276834235,0.573409195690071,0.443716206147409,0.807253238237985,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,2.62691028688288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,3.40414893011235,7.08482881627925,2.07524016774297,2.87162909937057,0.504143392443436,4.77185042003103,1.45328081068666,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,2.4988906308806,4.68646859168308,2.27355476151302,3.80494861163441,0.546974809018219,0,0,0,0,4.28561468702629,0,0,0,0,0,0,2.24300118823545,3.485956998831,0,0,0,3.14231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,4.69141282317311,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.535928260312357,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@NEURL | |||
}} | }} |
Latest revision as of 03:42, 16 September 2015
Short description: | p13@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NEURL_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -48bp_to_NM_004210, uc001kxh.2_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | B4DS86O76050 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data