FFCP PHASE1:Hg19::chr6:152623208..152623223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc010kiy.1_5end | |association_with_transcript=15bp_to_uc010kiy.1_5end | ||
|cluster_id=chr6:152623208..152623223,- | |||
|description=CAGE_peak_10_at_SYNE1_5end | |description=CAGE_peak_10_at_SYNE1_5end | ||
|id=chr6:152623208..152623223,- | |id=chr6:152623208..152623223,- | ||
|ontology_enrichment_celltype=CL:0000838!8.12e-13!52;CL:0000542!2.78e-12!53;CL:0000051!2.78e-12!53;CL:0000791!4.26e-12!18;CL:0000789!4.26e-12!18;CL:0002420!4.26e-12!18;CL:0002419!4.26e-12!18;CL:0000790!4.26e-12!18;CL:0002087!5.48e-12!119;CL:0000738!7.55e-11!140;CL:0002031!8.43e-11!124;CL:0000084!3.02e-09!25;CL:0000827!3.02e-09!25;CL:0000037!4.78e-09!172;CL:0000566!4.78e-09!172;CL:0000625!1.22e-08!11;CL:0000988!8.40e-08!182;CL:0002032!9.27e-08!165;CL:0000837!9.27e-08!165 | |ontology_enrichment_celltype=CL:0000838!8.12e-13!52;CL:0000542!2.78e-12!53;CL:0000051!2.78e-12!53;CL:0000791!4.26e-12!18;CL:0000789!4.26e-12!18;CL:0002420!4.26e-12!18;CL:0002419!4.26e-12!18;CL:0000790!4.26e-12!18;CL:0002087!5.48e-12!119;CL:0000738!7.55e-11!140;CL:0002031!8.43e-11!124;CL:0000084!3.02e-09!25;CL:0000827!3.02e-09!25;CL:0000037!4.78e-09!172;CL:0000566!4.78e-09!172;CL:0000625!1.22e-08!11;CL:0000988!8.40e-08!182;CL:0002032!9.27e-08!165;CL:0000837!9.27e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.36e-12;18!CL:0000789;1.36e-12;18!CL:0002419;1.36e-12;18!CL:0000625;7.74e-11;11!CL:0000084;1.73e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.84e-13,18;CL:0000789,4.84e-13,18;CL:0002420,4.84e-13,18;CL:0002419,4.84e-13,18;CL:0000790,4.84e-13,18;CL:0000625,3.31e-11,11;CL:0000084,8.54e-09,25;CL:0000827,8.54e-09,25;CL:0000838,8.90e-09,52;CL:0000542,1.53e-08,53;CL:0000051,1.53e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.36e-12;18!UBERON:0006215;3.26e-09;3!UBERON:0006601;3.80e-07;82!UBERON:0010122;6.09e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001049!7.90e-22!57;UBERON:0005068!7.90e-22!57;UBERON:0006241!7.90e-22!57;UBERON:0007135!7.90e-22!57;UBERON:0003080!1.82e-20!42;UBERON:0001893!3.28e-20!34;UBERON:0002780!5.79e-20!41;UBERON:0001890!5.79e-20!41;UBERON:0006240!5.79e-20!41;UBERON:0002020!6.89e-20!34;UBERON:0003528!6.89e-20!34;UBERON:0002616!9.86e-20!59;UBERON:0002791!1.58e-19!33;UBERON:0001869!2.01e-19!32;UBERON:0000955!9.90e-19!69;UBERON:0006238!9.90e-19!69;UBERON:0001017!1.20e-18!82;UBERON:0005743!1.27e-17!86;UBERON:0002346!2.41e-17!90;UBERON:0003075!6.07e-17!86;UBERON:0007284!6.07e-17!86;UBERON:0000073!8.49e-16!94;UBERON:0001016!8.49e-16!94;UBERON:0002619!3.09e-15!22;UBERON:0000956!1.88e-14!25;UBERON:0000203!1.88e-14!25;UBERON:0003056!2.37e-14!61;UBERON:0001950!6.68e-14!20;UBERON:0000153!1.81e-09!129;UBERON:0007811!1.81e-09!129;UBERON:0000033!9.55e-08!123;UBERON:0002308!6.23e-07!9;UBERON:0000125!6.23e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001049!7.90e-22!57;UBERON:0005068!7.90e-22!57;UBERON:0006241!7.90e-22!57;UBERON:0007135!7.90e-22!57;UBERON:0003080!1.82e-20!42;UBERON:0001893!3.28e-20!34;UBERON:0002780!5.79e-20!41;UBERON:0001890!5.79e-20!41;UBERON:0006240!5.79e-20!41;UBERON:0002020!6.89e-20!34;UBERON:0003528!6.89e-20!34;UBERON:0002616!9.86e-20!59;UBERON:0002791!1.58e-19!33;UBERON:0001869!2.01e-19!32;UBERON:0000955!9.90e-19!69;UBERON:0006238!9.90e-19!69;UBERON:0001017!1.20e-18!82;UBERON:0005743!1.27e-17!86;UBERON:0002346!2.41e-17!90;UBERON:0003075!6.07e-17!86;UBERON:0007284!6.07e-17!86;UBERON:0000073!8.49e-16!94;UBERON:0001016!8.49e-16!94;UBERON:0002619!3.09e-15!22;UBERON:0000956!1.88e-14!25;UBERON:0000203!1.88e-14!25;UBERON:0003056!2.37e-14!61;UBERON:0001950!6.68e-14!20;UBERON:0000153!1.81e-09!129;UBERON:0007811!1.81e-09!129;UBERON:0000033!9.55e-08!123;UBERON:0002308!6.23e-07!9;UBERON:0000125!6.23e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.57e-43;22!UBERON:0001950;2.84e-43;20!UBERON:0001869;1.36e-41;32!UBERON:0002791;1.04e-38;32!UBERON:0001893;2.14e-38;34!UBERON:0000956;7.88e-38;25!UBERON:0000203;7.88e-38;25!UBERON:0003528;1.06e-35;34!UBERON:0002020;1.06e-35;34!UBERON:0002780;1.06e-31;41!UBERON:0001890;1.06e-31;41!UBERON:0000073;1.09e-24;53!UBERON:0002616;1.09e-24;53!UBERON:0000955;4.09e-20;68!UBERON:0001017;1.38e-18;75!UBERON:0000200;4.09e-16;6!UBERON:0002021;2.57e-14;5!UBERON:0001016;4.68e-14;83!UBERON:0001872;6.04e-14;5!UBERON:0000369;3.29e-12;4!UBERON:0002435;3.29e-12;4!UBERON:0000204;3.29e-12;4!UBERON:0005383;1.01e-09;3!UBERON:0005382;1.01e-09;3!UBERON:0001871;1.42e-09;6!UBERON:0001870;2.15e-09;3!UBERON:0002420;4.95e-08;9!UBERON:0007245;4.95e-08;9!UBERON:0010009;4.95e-08;9!UBERON:0010011;4.95e-08;9!UBERON:0000454;4.95e-08;9!UBERON:0007023;7.90e-08;114!UBERON:0001873;6.09e-07;2!UBERON:0009663;6.27e-07;7!UBERON:0002702;6.92e-07;2!UBERON:0002370;8.19e-07;2!UBERON:0005058;8.19e-07;2!UBERON:0009113;8.19e-07;2 | |||
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| ||
|short_description=p10@SYNE1 | |short_description=p10@SYNE1 | ||
}} | }} |
Latest revision as of 06:31, 16 September 2015
Short description: | p10@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_uc010kiy.1_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.84e-13 | 18 |
alpha-beta T cell | 4.84e-13 | 18 |
immature T cell | 4.84e-13 | 18 |
mature T cell | 4.84e-13 | 18 |
immature alpha-beta T cell | 4.84e-13 | 18 |
CD8-positive, alpha-beta T cell | 3.31e-11 | 11 |
T cell | 8.54e-09 | 25 |
pro-T cell | 8.54e-09 | 25 |
lymphoid lineage restricted progenitor cell | 8.90e-09 | 52 |
lymphocyte | 1.53e-08 | 53 |
common lymphoid progenitor | 1.53e-08 | 53 |