FFCP PHASE1:Hg19::chr19:19639679..19639690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374887 | |EntrezGene=374887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24785 | |HGNC=24785 | ||
|TSSclassifier=strong | |||
|UniProt=A6XGL0,Q6ZT45 | |UniProt=A6XGL0,Q6ZT45 | ||
|association_with_transcript=9bp_to_ENST00000397179,ENST00000436027,NM_001190328,NM_198537_5end | |association_with_transcript=9bp_to_ENST00000397179,ENST00000436027,NM_001190328,NM_198537_5end | ||
|cluster_id=chr19:19639679..19639690,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_YJEFN3_5end | |description=CAGE_peak_4_at_YJEFN3_5end | ||
|id=chr19:19639679..19639690,+ | |id=chr19:19639679..19639690,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-13;82!UBERON:0010122;6.07e-12;2!UBERON:0006222;7.56e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.05e-70!57;UBERON:0005068!8.05e-70!57;UBERON:0006241!8.05e-70!57;UBERON:0007135!8.05e-70!57;UBERON:0002780!1.45e-64!41;UBERON:0001890!1.45e-64!41;UBERON:0006240!1.45e-64!41;UBERON:0002616!9.90e-64!59;UBERON:0001017!1.29e-63!82;UBERON:0003080!8.62e-63!42;UBERON:0005743!1.78e-62!86;UBERON:0000073!8.49e-60!94;UBERON:0001016!8.49e-60!94;UBERON:0000955!1.91e-57!69;UBERON:0006238!1.91e-57!69;UBERON:0001893!1.31e-54!34;UBERON:0002020!3.65e-54!34;UBERON:0003528!3.65e-54!34;UBERON:0003075!6.33e-53!86;UBERON:0007284!6.33e-53!86;UBERON:0002791!2.25e-52!33;UBERON:0001869!8.29e-51!32;UBERON:0002346!6.16e-50!90;UBERON:0003056!3.00e-47!61;UBERON:0007023!1.02e-38!115;UBERON:0002619!1.56e-37!22;UBERON:0000956!9.33e-36!25;UBERON:0000203!9.33e-36!25;UBERON:0004121!1.50e-34!169;UBERON:0000033!3.96e-34!123;UBERON:0000153!2.21e-33!129;UBERON:0007811!2.21e-33!129;UBERON:0000924!2.25e-33!173;UBERON:0006601!2.25e-33!173;UBERON:0001950!2.38e-33!20;UBERON:0002420!6.48e-21!9;UBERON:0007245!6.48e-21!9;UBERON:0010009!6.48e-21!9;UBERON:0010011!6.48e-21!9;UBERON:0000454!6.48e-21!9;UBERON:0002308!4.50e-20!9;UBERON:0000125!4.50e-20!9;UBERON:0009663!2.02e-16!7;UBERON:0000025!7.79e-15!194;UBERON:0000200!1.26e-14!6;UBERON:0000483!6.18e-13!309;UBERON:0004111!9.88e-13!241;UBERON:0000475!1.06e-12!365;UBERON:0000119!1.17e-12!312;UBERON:0000349!1.19e-12!5;UBERON:0001872!5.00e-12!5;UBERON:0001894!4.49e-11!7;UBERON:0006222!4.49e-11!7;UBERON:0001871!8.50e-11!7;UBERON:0000369!1.01e-10!4;UBERON:0002435!1.01e-10!4;UBERON:0000204!1.01e-10!4;UBERON:0010082!1.01e-10!4;UBERON:0000477!1.84e-10!286;UBERON:0003076!9.85e-10!15;UBERON:0003057!9.85e-10!15;UBERON:0002298!4.15e-09!8;UBERON:0005383!1.86e-08!3;UBERON:0005382!1.86e-08!3;UBERON:0000064!3.57e-08!219;UBERON:0002771!6.10e-08!3;UBERON:0002021!9.87e-08!5;UBERON:0004733!1.26e-07!12;UBERON:0002028!1.26e-07!12;UBERON:0007277!1.26e-07!12;UBERON:0000988!2.83e-07!3;UBERON:0006331!4.45e-07!3;UBERON:0004732!5.85e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.47e-83;32!UBERON:0001893;3.74e-83;34!UBERON:0002791;2.45e-77;32!UBERON:0003528;1.56e-71;34!UBERON:0002020;1.56e-71;34!UBERON:0002619;5.94e-70;22!UBERON:0000956;2.05e-61;25!UBERON:0000203;2.05e-61;25!UBERON:0001950;1.07e-60;20!UBERON:0002780;7.65e-60;41!UBERON:0001890;7.65e-60;41!UBERON:0000073;1.67e-39;53!UBERON:0002616;1.67e-39;53!UBERON:0002420;4.82e-37;9!UBERON:0007245;4.82e-37;9!UBERON:0010009;4.82e-37;9!UBERON:0010011;4.82e-37;9!UBERON:0000454;4.82e-37;9!UBERON:0000200;4.02e-31;6!UBERON:0001017;1.43e-28;75!UBERON:0000955;5.11e-27;68!UBERON:0009663;5.90e-27;7!UBERON:0000349;1.04e-26;5!UBERON:0000369;2.40e-22;4!UBERON:0002435;2.40e-22;4!UBERON:0000204;2.40e-22;4!UBERON:0000125;7.59e-21;9!UBERON:0002308;7.59e-21;9!UBERON:0001016;1.95e-19;83!UBERON:0001871;5.80e-19;6!UBERON:0005383;3.24e-17;3!UBERON:0005382;3.24e-17;3!UBERON:0001872;5.97e-17;5!UBERON:0001870;1.26e-16;3!UBERON:0007023;5.86e-15;114!UBERON:0001876;4.76e-12;2!UBERON:0001873;6.07e-12;2!UBERON:0002702;1.15e-11;2!UBERON:0001954;2.67e-11;2!UBERON:0003022;2.67e-11;2!UBERON:0002421;2.67e-11;2!UBERON:0002600;2.67e-11;2!UBERON:0002771;3.84e-11;2!UBERON:0001875;5.65e-11;2!UBERON:0006514;5.65e-11;2!UBERON:0002021;7.28e-10;5!UBERON:0011216;1.45e-09;132!UBERON:0001874;5.58e-07;1!UBERON:0002022;6.40e-07;1!UBERON:0010314;6.85e-07;132!UBERON:0001882;7.56e-07;1!UBERON:0005403;7.56e-07;1!UBERON:0002581;9.40e-07;1!UBERON:0007190;9.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,6.39e-96,34;UBERON:0001869,1.83e-94,32;UBERON:0002791,1.09e-86,32;UBERON:0002780,1.26e-85,41;UBERON:0001890,1.26e-85,41;UBERON:0003080,1.26e-85,41;UBERON:0006240,1.26e-85,41;UBERON:0003528,1.97e-81,34;UBERON:0002020,1.97e-81,34;UBERON:0001049,3.58e-71,56;UBERON:0005068,3.58e-71,56;UBERON:0006241,3.58e-71,56;UBERON:0007135,3.58e-71,56;UBERON:0000073,2.86e-70,53;UBERON:0002616,2.86e-70,53;UBERON:0002619,4.75e-70,22;UBERON:0000956,1.68e-61,25;UBERON:0000203,1.68e-61,25;UBERON:0000955,3.07e-61,68;UBERON:0006238,3.07e-61,68;UBERON:0001950,9.37e-61,20;UBERON:0001017,3.45e-58,81;UBERON:0003056,3.92e-56,61;UBERON:0001016,7.24e-52,89;UBERON:0003075,5.73e-47,82;UBERON:0007284,5.73e-47,82;UBERON:0002346,1.58e-44,86;UBERON:0007023,1.87e-43,114;UBERON:0002420,5.96e-37,9;UBERON:0007245,5.96e-37,9;UBERON:0010009,5.96e-37,9;UBERON:0010011,5.96e-37,9;UBERON:0000454,5.96e-37,9;UBERON:0010371,7.70e-36,104;UBERON:0000200,2.94e-31,6;UBERON:0010314,3.45e-29,132;UBERON:0009663,7.07e-27,7;UBERON:0000349,9.32e-27,5;UBERON:0004121,2.38e-24,171;UBERON:0000924,2.38e-24,171;UBERON:0006601,2.38e-24,171;UBERON:0000369,2.34e-22,4;UBERON:0002435,2.34e-22,4;UBERON:0000204,2.34e-22,4;UBERON:0010082,2.34e-22,4;UBERON:0000125,8.72e-21,9;UBERON:0002308,8.72e-21,9;UBERON:0001871,4.64e-19,6;UBERON:0011216,1.58e-18,223;UBERON:0005383,3.25e-17,3;UBERON:0005382,3.25e-17,3;UBERON:0001872,6.22e-17,5;UBERON:0000025,1.12e-16,192;UBERON:0001870,1.52e-16,3;UBERON:0004111,4.03e-12,240;UBERON:0001876,4.89e-12,2;UBERON:0001873,6.07e-12,2;UBERON:0010122,6.07e-12,2;UBERON:0002702,1.35e-11,2;UBERON:0001954,2.41e-11,2;UBERON:0003022,2.41e-11,2;UBERON:0002421,2.41e-11,2;UBERON:0002600,2.41e-11,2;UBERON:0002771,2.67e-11,2;UBERON:0001875,7.11e-11,2;UBERON:0006514,7.11e-11,2;UBERON:0002021,6.96e-10,5;UBERON:0000483,5.09e-09,306;UBERON:0000119,7.16e-09,309;UBERON:0001874,5.58e-07,1;UBERON:0002022,6.23e-07,1;UBERON:0001882,7.35e-07,1;UBERON:0005403,7.35e-07,1;UBERON:0007190,8.67e-07,1;UBERON:0002581,9.15e-07,1 | |||
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|short_description=p4@YJEFN3 | |short_description=p4@YJEFN3 | ||
}} | }} |
Latest revision as of 20:12, 16 September 2015
Short description: | p4@YJEFN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YJEFN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 9bp_to_ENST00000397179, ENST00000436027, NM_001190328, NM_198537_5end |
EntrezGene: | YJEFN3 |
HGNC: | 24785 |
UniProt: | A6XGL0Q6ZT45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data