FFCP PHASE1:Hg19::chr11:1411205..1411236,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1411205..1411236,+ to FFCP PHASE1:Hg19::chr11:1411205..1411236,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9024 | |EntrezGene=9024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11405 | |HGNC=11405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000308230,ENST00000528841,ENST00000529433,ENST00000531197_5end | |||
|cluster_id=chr11:1411205..1411236,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_BRSK2_5end | |||
|id=chr11:1411205..1411236,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.65e-08!6;CL:0000031!5.65e-08!6;CL:0000404!5.65e-08!6;CL:0002319!6.92e-08!25;CL:0000047!1.11e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.17e-10;6!CL:0000404;2.17e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.17e-10,8;CL:0000540,2.58e-10,6;CL:0000031,2.58e-10,6;CL:0000404,2.58e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-18;82!CL:0000031;2.17e-10;6!UBERON:0006241;3.87e-08;3!UBERON:0003057;3.87e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.27e-57!94;UBERON:0001016!3.27e-57!94;UBERON:0005743!1.22e-55!86;UBERON:0001017!1.28e-55!82;UBERON:0001049!9.23e-47!57;UBERON:0005068!9.23e-47!57;UBERON:0006241!9.23e-47!57;UBERON:0007135!9.23e-47!57;UBERON:0000955!1.15e-43!69;UBERON:0006238!1.15e-43!69;UBERON:0002780!2.62e-39!41;UBERON:0001890!2.62e-39!41;UBERON:0006240!2.62e-39!41;UBERON:0002616!2.54e-38!59;UBERON:0003080!4.67e-38!42;UBERON:0002346!6.38e-37!90;UBERON:0003075!3.08e-36!86;UBERON:0007284!3.08e-36!86;UBERON:0001893!4.01e-34!34;UBERON:0002020!4.16e-34!34;UBERON:0003528!4.16e-34!34;UBERON:0002791!8.52e-33!33;UBERON:0001869!8.43e-32!32;UBERON:0000924!3.41e-28!173;UBERON:0006601!3.41e-28!173;UBERON:0003056!4.54e-28!61;UBERON:0004121!2.72e-27!169;UBERON:0001950!7.81e-26!20;UBERON:0002619!1.23e-25!22;UBERON:0000956!1.48e-23!25;UBERON:0000203!1.48e-23!25;UBERON:0007023!4.00e-23!115;UBERON:0000033!1.42e-21!123;UBERON:0000153!1.03e-19!129;UBERON:0007811!1.03e-19!129;UBERON:0002308!4.45e-12!9;UBERON:0000125!4.45e-12!9;UBERON:0003076!7.42e-10!15;UBERON:0003057!7.42e-10!15;UBERON:0009663!1.14e-09!7;UBERON:0002420!1.86e-09!9;UBERON:0007245!1.86e-09!9;UBERON:0010009!1.86e-09!9;UBERON:0010011!1.86e-09!9;UBERON:0000454!1.86e-09!9;UBERON:0000200!2.56e-09!6;UBERON:0001871!7.48e-09!7;UBERON:0002298!1.90e-08!8;UBERON:0000922!1.91e-08!612;UBERON:0001872!2.59e-08!5;UBERON:0002021!2.78e-08!5;UBERON:0000062!4.37e-08!511;UBERON:0004732!7.23e-08!13;UBERON:0000025!4.76e-07!194;UBERON:0000064!5.94e-07!219;UBERON:0004733!6.16e-07!12;UBERON:0002028!6.16e-07!12;UBERON:0007277!6.16e-07!12;UBERON:0000923!6.50e-07!604;UBERON:0005291!6.50e-07!604;UBERON:0006598!6.50e-07!604;UBERON:0002532!6.50e-07!604;UBERON:0002050!7.58e-07!605;UBERON:0005423!7.58e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.66e-51;34!UBERON:0003528;5.26e-50;34!UBERON:0002020;5.26e-50;34!UBERON:0001869;9.90e-50;32!UBERON:0002619;1.01e-49;22!UBERON:0001950;1.15e-49;20!UBERON:0002791;1.40e-49;32!UBERON:0002780;3.37e-45;41!UBERON:0001890;3.37e-45;41!UBERON:0000956;2.97e-43;25!UBERON:0000203;2.97e-43;25!UBERON:0000073;6.90e-43;53!UBERON:0002616;6.90e-43;53!UBERON:0000955;3.79e-30;68!UBERON:0001017;9.18e-30;75!UBERON:0001016;4.91e-27;83!UBERON:0000125;5.57e-18;9!UBERON:0002308;5.57e-18;9!UBERON:0000200;1.41e-16;6!UBERON:0002298;1.44e-15;6!UBERON:0004732;2.65e-15;13!UBERON:0001872;8.07e-15;5!UBERON:0002021;1.44e-14;5!UBERON:0001871;6.96e-14;6!UBERON:0002420;7.87e-14;9!UBERON:0007245;7.87e-14;9!UBERON:0010009;7.87e-14;9!UBERON:0010011;7.87e-14;9!UBERON:0000454;7.87e-14;9!UBERON:0004733;2.07e-13;12!UBERON:0002028;2.07e-13;12!UBERON:0009663;2.50e-13;7!UBERON:0007023;1.04e-12;114!UBERON:0000369;2.64e-11;4!UBERON:0002435;2.64e-11;4!UBERON:0000204;2.64e-11;4!UBERON:0011216;8.19e-11;132!UBERON:0001870;5.95e-09;3!UBERON:0000988;7.08e-09;3!UBERON:0005383;7.28e-09;3!UBERON:0005382;7.28e-09;3!UBERON:0001896;2.20e-08;3!UBERON:0005290;2.20e-08;3!UBERON:0002240;3.87e-08;3!UBERON:0005174;3.87e-08;3!UBERON:0001137;3.87e-08;3!UBERON:0002680;1.08e-07;9!UBERON:0001895;1.08e-07;9!UBERON:0010314;4.14e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-86,81;UBERON:0001016,2.46e-86,89;UBERON:0001049,1.86e-82,56;UBERON:0005068,1.86e-82,56;UBERON:0006241,1.86e-82,56;UBERON:0007135,1.86e-82,56;UBERON:0000073,6.32e-76,53;UBERON:0002616,6.32e-76,53;UBERON:0000955,3.98e-69,68;UBERON:0006238,3.98e-69,68;UBERON:0002780,1.87e-63,41;UBERON:0001890,1.87e-63,41;UBERON:0003080,1.87e-63,41;UBERON:0006240,1.87e-63,41;UBERON:0001893,4.68e-60,34;UBERON:0002346,4.87e-60,86;UBERON:0003528,5.01e-60,34;UBERON:0002020,5.01e-60,34;UBERON:0003075,4.85e-58,82;UBERON:0007284,4.85e-58,82;UBERON:0001869,1.53e-55,32;UBERON:0002791,2.84e-55,32;UBERON:0002619,1.13e-49,22;UBERON:0001950,1.40e-49,20;UBERON:0010371,8.88e-48,104;UBERON:0004121,2.80e-47,171;UBERON:0000924,2.80e-47,171;UBERON:0006601,2.80e-47,171;UBERON:0003056,3.99e-45,61;UBERON:0000956,3.28e-43,25;UBERON:0000203,3.28e-43,25;UBERON:0007023,1.28e-36,114;UBERON:0010314,3.08e-33,132;UBERON:0011216,2.04e-31,223;UBERON:0003076,3.24e-19,15;UBERON:0003057,3.24e-19,15;UBERON:0000125,6.17e-18,9;UBERON:0002308,6.17e-18,9;UBERON:0000025,7.33e-17,192;UBERON:0000200,1.10e-16,6;UBERON:0002298,1.49e-15,6;UBERON:0004732,2.94e-15,13;UBERON:0001872,1.00e-14,5;UBERON:0002021,1.15e-14,5;UBERON:0002420,8.41e-14,9;UBERON:0007245,8.41e-14,9;UBERON:0010009,8.41e-14,9;UBERON:0010011,8.41e-14,9;UBERON:0000454,8.41e-14,9;UBERON:0001871,9.29e-14,6;UBERON:0004733,2.11e-13,12;UBERON:0002028,2.11e-13,12;UBERON:0007277,2.11e-13,12;UBERON:0009663,2.54e-13,7;UBERON:0004111,1.02e-12,240;UBERON:0000369,2.00e-11,4;UBERON:0002435,2.00e-11,4;UBERON:0000204,2.00e-11,4;UBERON:0010082,2.00e-11,4;UBERON:0000483,5.02e-10,306;UBERON:0000119,8.22e-10,309;UBERON:0001870,5.15e-09,3;UBERON:0005383,5.89e-09,3;UBERON:0005382,5.89e-09,3;UBERON:0000988,7.50e-09,3;UBERON:0001896,2.15e-08,3;UBERON:0005290,2.15e-08,3;UBERON:0010096,2.15e-08,3;UBERON:0002240,5.68e-08,3;UBERON:0005174,5.68e-08,3;UBERON:0001137,5.68e-08,3;UBERON:0002680,1.10e-07,9;UBERON:0001895,1.10e-07,9;UBERON:0010092,1.10e-07,9;UBERON:0000923,1.67e-07,560;UBERON:0010316,1.67e-07,560;UBERON:0005291,1.67e-07,560;UBERON:0006598,1.67e-07,560;UBERON:0010317,1.67e-07,560;UBERON:0002532,1.67e-07,560;UBERON:0002050,2.45e-07,564;UBERON:0000922,9.39e-07,592 | |||
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| ||
|short_description=p3@BRSK2 | |||
}} | }} |
Latest revision as of 21:20, 16 September 2015
Short description: | p3@BRSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BRSK2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 74bp_to_ENST00000308230, ENST00000528841, ENST00000529433, ENST00000531197_5end |
EntrezGene: | BRSK2 |
HGNC: | 11405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.17e-10 | 8 |
neuron | 2.58e-10 | 6 |
neuroblast | 2.58e-10 | 6 |
electrically signaling cell | 2.58e-10 | 6 |