FFCP PHASE1:Hg19::chr20:61885781..61885822,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:61885781..61885822,-
|short_description=p1@NKAIN4
|description=CAGE_peak_1_at_NKAIN4_5end
|association_with_transcript=69bp_to_ENST00000370316,NM_152864,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128414 | |EntrezGene=128414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16191 | |HGNC=16191 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVV8,B3KWY5 | |UniProt=Q8IVV8,B3KWY5 | ||
|association_with_transcript=69bp_to_ENST00000370316,NM_152864,uc002yek.2_5end | |||
|cluster_id=chr20:61885781..61885822,- | |||
|coexpression_cluster_id=C3988 | |||
|description=CAGE_peak_1_at_NKAIN4_5end | |||
|id=chr20:61885781..61885822,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.13e-09;10!CL:1000494;4.13e-09;10!CL:0002322;1.94e-08;5!CL:1000449;3.14e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.30e-09,10;CL:1000494,4.30e-09,10;CL:0002322,1.96e-08,5;CL:1000449,3.35e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.94e-11;82!UBERON:0006241;2.66e-07;3!UBERON:0003057;2.66e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.92e-50!86;UBERON:0000073!3.09e-49!94;UBERON:0001016!3.09e-49!94;UBERON:0001017!2.13e-48!82;UBERON:0001049!3.12e-47!57;UBERON:0005068!3.12e-47!57;UBERON:0006241!3.12e-47!57;UBERON:0007135!3.12e-47!57;UBERON:0003075!1.67e-40!86;UBERON:0007284!1.67e-40!86;UBERON:0002616!6.06e-40!59;UBERON:0002780!8.86e-39!41;UBERON:0001890!8.86e-39!41;UBERON:0006240!8.86e-39!41;UBERON:0002346!1.06e-37!90;UBERON:0000955!1.31e-37!69;UBERON:0006238!1.31e-37!69;UBERON:0003080!1.63e-37!42;UBERON:0002020!2.34e-36!34;UBERON:0003528!2.34e-36!34;UBERON:0001893!3.00e-36!34;UBERON:0002791!3.11e-35!33;UBERON:0003056!3.38e-35!61;UBERON:0001869!6.40e-34!32;UBERON:0000153!8.89e-28!129;UBERON:0007811!8.89e-28!129;UBERON:0000033!4.47e-27!123;UBERON:0004121!5.68e-27!169;UBERON:0002619!4.88e-26!22;UBERON:0000924!9.80e-26!173;UBERON:0006601!9.80e-26!173;UBERON:0000956!9.89e-26!25;UBERON:0000203!9.89e-26!25;UBERON:0007023!2.10e-24!115;UBERON:0001950!1.69e-23!20;UBERON:0000064!3.30e-14!219;UBERON:0000483!4.96e-13!309;UBERON:0000119!1.22e-12!312;UBERON:0002420!3.48e-12!9;UBERON:0007245!3.48e-12!9;UBERON:0010009!3.48e-12!9;UBERON:0010011!3.48e-12!9;UBERON:0000454!3.48e-12!9;UBERON:0002308!4.77e-12!9;UBERON:0000125!4.77e-12!9;UBERON:0000025!2.03e-11!194;UBERON:0003076!1.06e-10!15;UBERON:0003057!1.06e-10!15;UBERON:0001871!3.96e-10!7;UBERON:0000481!5.97e-10!347;UBERON:0009663!9.36e-10!7;UBERON:0000475!2.40e-09!365;UBERON:0000922!1.01e-08!612;UBERON:0004111!1.84e-08!241;UBERON:0004732!3.35e-08!13;UBERON:0000477!3.78e-08!286;UBERON:0000349!1.02e-07!5;UBERON:0002298!1.30e-07!8;UBERON:0004733!1.93e-07!12;UBERON:0002028!1.93e-07!12;UBERON:0007277!1.93e-07!12;UBERON:0000200!2.01e-07!6;UBERON:0001872!6.42e-07!5;UBERON:0002021!7.71e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.07e-43;34!UBERON:0003528;1.80e-42;34!UBERON:0002020;1.80e-42;34!UBERON:0002791;5.60e-42;32!UBERON:0001869;7.37e-42;32!UBERON:0002780;5.60e-38;41!UBERON:0001890;5.60e-38;41!UBERON:0002619;1.31e-36;22!UBERON:0000956;2.32e-34;25!UBERON:0000203;2.32e-34;25!UBERON:0000073;2.34e-34;53!UBERON:0002616;2.34e-34;53!UBERON:0001950;1.15e-32;20!UBERON:0001017;7.28e-24;75!UBERON:0000955;9.27e-23;68!UBERON:0001016;2.90e-20;83!UBERON:0002420;4.13e-18;9!UBERON:0007245;4.13e-18;9!UBERON:0010009;4.13e-18;9!UBERON:0010011;4.13e-18;9!UBERON:0000454;4.13e-18;9!UBERON:0000125;7.18e-18;9!UBERON:0002308;7.18e-18;9!UBERON:0009663;2.51e-14;7!UBERON:0001871;3.05e-13;6!UBERON:0002298;2.06e-11;6!UBERON:0000349;3.63e-11;5!UBERON:0004732;1.39e-10;13!UBERON:0001872;6.00e-10;5!UBERON:0000489;6.87e-10;29!UBERON:0002021;9.89e-10;5!UBERON:0004733;1.92e-09;12!UBERON:0002028;1.92e-09;12!UBERON:0000369;2.91e-09;4!UBERON:0002435;2.91e-09;4!UBERON:0000204;2.91e-09;4!UBERON:0007023;2.95e-09;114!UBERON:0004211;4.13e-09;10!UBERON:0009773;4.13e-09;10!UBERON:0001231;4.13e-09;10!UBERON:0004810;4.13e-09;10!UBERON:0011216;1.35e-08;132!UBERON:0000200;7.41e-08;6!UBERON:0005383;1.67e-07;3!UBERON:0005382;1.67e-07;3!UBERON:0000922;1.98e-07;49!UBERON:0010314;2.49e-07;132!UBERON:0002240;2.66e-07;3!UBERON:0005174;2.66e-07;3!UBERON:0001137;2.66e-07;3!UBERON:0002113;2.85e-07;24!UBERON:0011143;2.85e-07;24!UBERON:0006555;3.14e-07;15!UBERON:0004819;3.14e-07;15!UBERON:0001285;3.14e-07;15!UBERON:0007684;3.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.27e-66,56;UBERON:0005068,1.27e-66,56;UBERON:0006241,1.27e-66,56;UBERON:0007135,1.27e-66,56;UBERON:0001017,1.28e-61,81;UBERON:0000073,6.62e-61,53;UBERON:0002616,6.62e-61,53;UBERON:0001016,3.36e-58,89;UBERON:0003075,8.99e-58,82;UBERON:0007284,8.99e-58,82;UBERON:0002346,2.52e-54,86;UBERON:0002780,5.28e-53,41;UBERON:0001890,5.28e-53,41;UBERON:0003080,5.28e-53,41;UBERON:0006240,5.28e-53,41;UBERON:0000955,3.34e-51,68;UBERON:0006238,3.34e-51,68;UBERON:0003528,8.23e-51,34;UBERON:0002020,8.23e-51,34;UBERON:0001893,1.19e-50,34;UBERON:0003056,2.03e-49,61;UBERON:0002791,3.79e-47,32;UBERON:0001869,4.83e-47,32;UBERON:0010371,5.53e-44,104;UBERON:0002619,1.06e-36,22;UBERON:0000956,2.08e-34,25;UBERON:0000203,2.08e-34,25;UBERON:0010314,5.73e-34,132;UBERON:0001950,9.17e-33,20;UBERON:0004121,1.06e-31,171;UBERON:0000924,1.06e-31,171;UBERON:0006601,1.06e-31,171;UBERON:0007023,8.76e-26,114;UBERON:0011216,5.64e-21,223;UBERON:0002420,4.10e-18,9;UBERON:0007245,4.10e-18,9;UBERON:0010009,4.10e-18,9;UBERON:0010011,4.10e-18,9;UBERON:0000454,4.10e-18,9;UBERON:0000125,6.72e-18,9;UBERON:0002308,6.72e-18,9;UBERON:0000025,8.45e-18,192;UBERON:0003076,2.19e-14,15;UBERON:0003057,2.19e-14,15;UBERON:0009663,2.51e-14,7;UBERON:0001871,2.97e-13,6;UBERON:0000483,1.40e-12,306;UBERON:0000119,2.75e-12,309;UBERON:0002298,1.92e-11,6;UBERON:0004111,3.24e-11,240;UBERON:0000349,3.67e-11,5;UBERON:0004732,1.27e-10,13;UBERON:0001872,6.42e-10,5;UBERON:0002021,8.52e-10,5;UBERON:0004733,1.81e-09,12;UBERON:0002028,1.81e-09,12;UBERON:0007277,1.81e-09,12;UBERON:0000369,3.00e-09,4;UBERON:0002435,3.00e-09,4;UBERON:0000204,3.00e-09,4;UBERON:0010082,3.00e-09,4;UBERON:0004810,4.30e-09,10;UBERON:0000489,4.86e-09,31;UBERON:0000922,3.12e-08,592;UBERON:0000200,6.04e-08,6;UBERON:0005383,1.73e-07,3;UBERON:0005382,1.73e-07,3;UBERON:0002240,2.55e-07,3;UBERON:0005174,2.55e-07,3;UBERON:0001137,2.55e-07,3;UBERON:0004211,3.35e-07,15;UBERON:0009773,3.35e-07,15;UBERON:0001231,3.35e-07,15;UBERON:0001285,3.35e-07,15;UBERON:0007684,3.35e-07,15;UBERON:0004208,3.35e-07,15;UBERON:0000988,9.15e-07,3 | |||
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| ||
|short_description=p1@NKAIN4 | |||
}} | }} |
Latest revision as of 12:28, 17 September 2015
Short description: | p1@NKAIN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKAIN4_5end |
Coexpression cluster: | C3988_spinal_brain_putamen_Renal_rectum_hippocampus_skeletal |
Association with transcript: | 69bp_to_ENST00000370316, NM_152864, uc002yek.2_5end |
EntrezGene: | NKAIN4 |
HGNC: | 16191 |
UniProt: | Q8IVV8B3KWY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.30e-09 | 10 |
nephron tubule epithelial cell | 4.30e-09 | 10 |
embryonic stem cell | 1.96e-08 | 5 |
epithelial cell of nephron | 3.35e-07 | 15 |