FFCP PHASE1:Hg19::chr2:55237484..55237495,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L7Q5,Q9NQC3 | |||
|association_with_transcript=-14bp_to_NM_007008,uc002ryc.2_5end | |||
|cluster_id=chr2:55237484..55237495,- | |||
|description=CAGE_peak_20_at_RTN4_5end | |||
|id=chr2:55237484..55237495,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-12;82!UBERON:0006215;3.01e-11;3!UBERON:0010122;3.97e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.74e-50!115;UBERON:0001049!1.37e-40!57;UBERON:0005068!1.37e-40!57;UBERON:0006241!1.37e-40!57;UBERON:0007135!1.37e-40!57;UBERON:0002616!4.83e-35!59;UBERON:0002780!1.40e-33!41;UBERON:0001890!1.40e-33!41;UBERON:0006240!1.40e-33!41;UBERON:0002020!1.18e-32!34;UBERON:0003528!1.18e-32!34;UBERON:0003080!1.70e-32!42;UBERON:0001869!6.64e-31!32;UBERON:0000955!1.68e-30!69;UBERON:0006238!1.68e-30!69;UBERON:0001893!2.41e-30!34;UBERON:0003075!2.89e-29!86;UBERON:0007284!2.89e-29!86;UBERON:0002791!3.37e-29!33;UBERON:0001017!1.44e-28!82;UBERON:0002346!2.18e-28!90;UBERON:0005743!7.48e-28!86;UBERON:0002619!1.01e-26!22;UBERON:0000073!1.19e-24!94;UBERON:0001016!1.19e-24!94;UBERON:0000153!4.97e-24!129;UBERON:0007811!4.97e-24!129;UBERON:0001950!5.42e-24!20;UBERON:0000956!1.05e-22!25;UBERON:0000203!1.05e-22!25;UBERON:0000033!6.30e-22!123;UBERON:0003056!2.08e-21!61;UBERON:0004121!7.27e-15!169;UBERON:0000924!9.65e-15!173;UBERON:0006601!9.65e-15!173;UBERON:0002420!4.59e-12!9;UBERON:0007245!4.59e-12!9;UBERON:0010009!4.59e-12!9;UBERON:0010011!4.59e-12!9;UBERON:0000454!4.59e-12!9;UBERON:0002308!1.85e-11!9;UBERON:0000125!1.85e-11!9;UBERON:0001871!2.27e-11!7;UBERON:0004111!2.65e-09!241;UBERON:0009663!2.89e-09!7;UBERON:0003076!3.29e-09!15;UBERON:0003057!3.29e-09!15;UBERON:0000200!4.32e-09!6;UBERON:0000349!2.17e-08!5;UBERON:0000475!2.18e-08!365;UBERON:0004733!2.39e-08!12;UBERON:0002028!2.39e-08!12;UBERON:0007277!2.39e-08!12;UBERON:0000064!3.37e-08!219;UBERON:0000025!5.20e-08!194;UBERON:0004732!1.57e-07!13;UBERON:0002298!2.06e-07!8;UBERON:0001872!2.06e-07!5;UBERON:0000481!3.61e-07!347;UBERON:0000477!5.61e-07!286;UBERON:0000062!5.68e-07!511;UBERON:0000369!7.11e-07!4;UBERON:0002435!7.11e-07!4;UBERON:0000204!7.11e-07!4;UBERON:0010082!7.11e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.96e-45;32!UBERON:0003528;1.89e-42;34!UBERON:0002020;1.89e-42;34!UBERON:0002791;4.93e-42;32!UBERON:0001893;5.79e-41;34!UBERON:0002619;6.56e-40;22!UBERON:0002780;1.20e-35;41!UBERON:0001890;1.20e-35;41!UBERON:0000956;8.34e-35;25!UBERON:0000203;8.34e-35;25!UBERON:0001950;1.05e-33;20!UBERON:0000073;3.84e-29;53!UBERON:0002616;3.84e-29;53!UBERON:0000955;3.32e-23;68!UBERON:0001017;1.06e-20;75!UBERON:0002420;5.06e-19;9!UBERON:0007245;5.06e-19;9!UBERON:0010009;5.06e-19;9!UBERON:0010011;5.06e-19;9!UBERON:0000454;5.06e-19;9!UBERON:0000349;2.03e-18;5!UBERON:0001871;6.73e-18;6!UBERON:0001016;5.36e-16;83!UBERON:0000369;1.33e-14;4!UBERON:0002435;1.33e-14;4!UBERON:0000204;1.33e-14;4!UBERON:0000200;1.41e-14;6!UBERON:0007023;1.03e-13;114!UBERON:0000125;1.48e-13;9!UBERON:0002308;1.48e-13;9!UBERON:0009663;1.35e-12;7!UBERON:0005383;1.05e-11;3!UBERON:0005382;1.05e-11;3!UBERON:0004733;1.13e-09;12!UBERON:0002028;1.13e-09;12!UBERON:0002680;2.35e-09;9!UBERON:0001895;2.35e-09;9!UBERON:0004732;7.03e-09;13!UBERON:0001876;9.75e-09;2!UBERON:0005090;1.11e-08;2!UBERON:0001630;1.11e-08;2!UBERON:0001954;1.70e-08;2!UBERON:0003022;1.70e-08;2!UBERON:0002421;1.70e-08;2!UBERON:0002600;1.70e-08;2!UBERON:0002771;3.63e-08;2!UBERON:0001873;3.97e-08;2!UBERON:0001905;9.09e-08;2!UBERON:0002757;9.09e-08;2!UBERON:0010134;9.09e-08;2!UBERON:0005408;9.09e-08;2!UBERON:0001899;9.09e-08;2!UBERON:0011216;6.29e-07;132!UBERON:0001872;9.89e-07;5 | |||
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|phase1_expression=0,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,1.96565443335525,2.95394953340702,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35813260568156,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0,0,0,0,10.9356241254293,4.78276015795743,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,2.13366625772258,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,6.20018970069687,1.92954301800653,3.05163472634166,1.76926815889959,3.84211904639612,3.51016635446356,0,0.139423744278603,0.0769502585037971,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,4.01288823649394,1.1713222286267,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0.581934098930517,0,0.677942222341597,0,0,2.91229661397042,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,2.40168115483916,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,5.56660782866512,3.26888174667781,0,0,0,0,0,2.49073182297901,0.670869375198532,3.70386824306231,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,3.66380584195206,0,1.0342636508924,0.79339561045614,0,0,0.213574825135389,0,0,0,0,0,0,7.61624924717264,5.5151776684994,5.20787480497885,9.18043365987452,0,3.54427271986794,7.32157589411779,0.876336514945499,1.14681839138014,0.554645257684261,0.496771223531068,1.38348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.337884881306145,0,0.345430341731199,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,1.66995985250795,1.41696576325585,0.478901577171454,1.43581454968528,0,1.31398779682014,3.55246420390072,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.14813893851271,2.34323429584154,0.826747186004736,1.52197944465376,0.546974809018219,0,1.98484471355718,0,0.255524855279191,2.14280734351315,1.3451348888753,0.606965604236632,0,0.266107110487916,0.115233987555779,0,1.01954599465248,2.23627430113687,0,0,0.39246546425257,7.22731713613609,0,0,0,0,0.571812353413251,0,0,0,0,0,0.85359238546975,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,7.76914604625474,4.41450069481862,0,0,0,0,0,0,0,0.150962843566674,2.70109553377806,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.69978725477287,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,2.98527574661373,0.952257725854961,0.0645889098360061,0.248298857183432,0,0.190941474834495,0.202117188958219,5.22520194952707,2.73786640868225,0.336760265072938,0.215166616178029,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0.805095174364105,0 | |||
|short_description=p20@RTN4 | |||
}} |
Latest revision as of 16:41, 17 September 2015
Short description: | p20@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_NM_007008, uc002ryc.2_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q7L7Q5Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data