FFCP PHASE1:Hg19::chr9:73483958..73483985,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:73483958..73483985,-
|short_description=p1@TRPM3
|description=CAGE_peak_1_at_TRPM3_5end
|association_with_transcript=0bp_to_ENST00000360823,ENST00000377101...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt=A2A3F4,Q504Y1,G5E9G1,E9PBI7,Q4VXD3,Q6NW43,Q9H200,A9Z1Y7 | |UniProt=A2A3F4,Q504Y1,G5E9G1,E9PBI7,Q4VXD3,Q6NW43,Q9H200,A9Z1Y7 | ||
|association_with_transcript=0bp_to_ENST00000360823,ENST00000377101,ENST00000377105,ENST00000377106,ENST00000455451,NM_001007470,NM_020952,NM_024971,NM_206944,NM_206945,NM_206946,NM_206947,NM_206948,uc004ahw.2,uc004ahx.2,uc004ahy.2,uc004ahz.2,uc004aia.2,uc004aib.2,uc004aie.2,uc004aif.2,uc004aig.2_5end | |||
|cluster_id=chr9:73483958..73483985,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_TRPM3_5end | |||
|id=chr9:73483958..73483985,- | |||
|ontology_enrichment_celltype=CL:0002494!3.46e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.39e-07;4!CL:0002547;1.39e-07;4!CL:0002586;1.80e-07;3!CL:0000064;2.11e-07;3!CL:0000067;2.11e-07;3!CL:0005012;2.11e-07;3!CL:0002304;2.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.80e-07,3;CL:1000306,2.05e-07,4;CL:0002547,2.05e-07,4;CL:0000064,2.12e-07,3;CL:0000067,2.12e-07,3;CL:0005012,2.12e-07,3;CL:0002304,2.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;8.08e-18;11!UBERON:0000970;7.08e-13;20!UBERON:0000020;1.79e-12;23!UBERON:0002104;4.20e-12;21!UBERON:0001032;8.39e-12;24!UBERON:0004456;8.39e-12;24!UBERON:0000019;2.33e-11;19!UBERON:0000047;2.33e-11;19!UBERON:0004088;2.33e-11;19!UBERON:0010230;2.33e-11;19!UBERON:0001456;5.35e-10;21!UBERON:0002780;2.04e-09;41!UBERON:0001890;2.04e-09;41!UBERON:0000488;3.50e-09;4!UBERON:0000073;1.40e-08;53!UBERON:0002616;1.40e-08;53!UBERON:0002420;1.86e-08;9!UBERON:0007245;1.86e-08;9!UBERON:0010009;1.86e-08;9!UBERON:0010011;1.86e-08;9!UBERON:0000454;1.86e-08;9!UBERON:0009663;2.09e-08;7!UBERON:0005904;3.95e-08;4!UBERON:0010371;7.13e-08;31!UBERON:0000948;7.27e-08;22!UBERON:0004797;1.39e-07;4!UBERON:0000415;1.39e-07;4!UBERON:0007240;1.39e-07;4!UBERON:0005742;1.39e-07;4!UBERON:0005734;1.39e-07;4!UBERON:0004664;1.39e-07;4!UBERON:0004663;1.39e-07;4!UBERON:0003135;1.45e-07;11!UBERON:0000966;1.61e-07;5!UBERON:0005388;1.61e-07;5!UBERON:0001802;1.61e-07;5!UBERON:0001781;1.80e-07;3!UBERON:0001782;1.80e-07;3!UBERON:0001896;1.85e-07;3!UBERON:0005290;1.85e-07;3!UBERON:0001778;2.11e-07;3!UBERON:0001775;2.11e-07;3!UBERON:0001017;2.36e-07;75!UBERON:0001893;5.33e-07;34!UBERON:0006947;6.77e-07;3!UBERON:0004054;6.77e-07;3!UBERON:0002791;7.35e-07;32 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.71741592278634,1.23186982565596,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,8.71911117614727,3.19656404608826,0,0,0,0,0,59.935074082019,23.5033161310318,35.573088205716,7.92423406761161,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0.446498641420399,0.673588117878509,0,0,0,0.183201743930407,0,0,0,0.496971951695318,1.2663051166458,4.237093786023,6.88407889797153,1.06400514659507,1.68203280042692,0,0.24666754841716,4.97937656639626,1.75123873690594,2.61539044981534,0.756787138224657,0.576175924479999,0,1.24864030732128,0,0.597794722207204,0,0,0,4.49139176760765,0,2.9964476540972,0,0.494533858557114,0,0,0,0,1.6623846929051,0.438977620880838,0,0,0.567160915800105,0,0,0.211931901159562,0,0,0.772921620136887,0.558350568994769,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,2.78865462886844,6.01234119089148,0,0,3.12899064659632,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,6.00487336044839,0,0,0,0,0,0,2.88662684050547,27.0117843591929,3.28744343860301,1.29929802984966,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,4.77778312003011,2.87666851570537,0.895304816199478,0,0,0,0,4.57370323600434,2.60279707715243,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0.831883446123229,4.63915370872621,3.15404830067869,1.28855556491985,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,81.038239536779,37.3936696097665,44.9022184636738,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,5.85263802334569,0,0,0,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,1.94970791705028,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.294747123039363,0.35667105148125,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,1.96937182974718,0.333926115068718,0,0,1.79323189425963,0.276283915531148,0,0.920418142519393,0,0,0,0,0,0.986434056369336,0,0,1.93866549219044,1.02044907978036,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.92954301800653,0,0.442317039724898,0.886642856860642,4.38770794307945,0,0,2.38545801361771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,1.23840590304675,0.611030144933625,0,0,0,26.084238463522,1.60515529459758,1.87411556580271,0,0,0,13.4158696968793,3.62972148145992,0,0.442306057399416,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,3.84398670132466,0.51595809741485,0,0,0,0,0,51.0716474164003,0.274083849293502,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.732219924186332,0,0,0,2.0535806833799,0,0.429765441419957,0,3.35138881526705,2.52076466412852,0,0.199679000498991,0.858452096273142,0.223171457441873,6.51679683121245,0,0,0,0,0,0,0,0,21.9287483839637,0,0,0,0,0,0.789744236554321,0,25.454243457641,17.2051049082794,0,2.86859742932552,0,0.714695326373367,0,0,1.08599920350743,0,0.653174720218818,0,0,0,0,0,0,0.258565912723101,0.79339561045614,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,1.2534494701135,0.306345576763462,0,0.314108192500469,0,0.854183854313742,0.625954653532499,96.332744875932,146.759135183256,17.0765108088804,343.381311911725,0,2.72968411574966,4.56744533671948,0,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0,0.73927574994817,0,0,0,0.414706207840855,0,0,0.300515217994437,0,0,0,0.322231671127465,0,0,1.60011105865261,0,0,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,1.09642024789354,0.883445729729405,0,0,1.02496607435179,0,0,0.276516872303462,0,0,0,0.327609848846413,4.42391235756695,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,1.22035527683273,0,2.07524016774297,0,0,0.207471757392654,0.807378228159255,0,0,0,0,0,0,0,0,3.53488543241509,0,0,0,0,0,0.270150338473579,0,0.826747186004736,0.380494861163441,2.7348740450911,0,1.48863353516788,0,0,3.21421101526972,8.74337677768942,0,5.00856820972855,0.0887023701626388,0,0,0.679697329768317,0.197318320688547,0,0,1.0989032999072,1.72827148907602,0,5.47895232305697,0.647782773655864,0,475.319018774765,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0,11.4314503551551,0,0,0,0,0.294450700845729,0.243835849964539,0,0,0,0.9714219861182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| ||
|short_description=p1@TRPM3 | |||
}} | }} |
Latest revision as of 18:45, 17 September 2015
Short description: | p1@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000360823, ENST00000377101, ENST00000377105, ENST00000377106, ENST00000455451, NM_001007470, NM_020952, NM_024971, NM_206944, NM_206945, NM_206946, NM_206947, NM_206948, uc004ahw.2, uc004ahx.2, uc004ahy.2, uc004ahz.2, uc004aia.2, uc004aib.2, uc004aie.2, uc004aif.2, uc004aig.2_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | A2A3F4Q504Y1G5E9G1E9PBI7Q4VXD3Q6NW43Q9H200A9Z1Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.80e-07 | 3 |
fibroblast of tunica adventitia of artery | 2.05e-07 | 4 |
fibroblast of the aortic adventitia | 2.05e-07 | 4 |
ciliated cell | 2.12e-07 | 3 |
ciliated epithelial cell | 2.12e-07 | 3 |
multi-ciliated epithelial cell | 2.12e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.12e-07 | 3 |