FFCP PHASE1:Hg19::chr12:25056133..25056148,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:25056133..25056148,- to FFCP PHASE1:Hg19::chr12:25056133..25056148,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt=F5H5E4,B7Z2M5,P54687 | |UniProt=F5H5E4,B7Z2M5,P54687 | ||
|association_with_transcript=-124bp_to_ENST00000539282,NM_001178093_5end | |||
|cluster_id=chr12:25056133..25056148,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_20_at_BCAT1_5end | |||
|id=chr12:25056133..25056148,- | |||
|ontology_enrichment_celltype=CL:0002057!7.92e-20!42;CL:0000860!7.19e-18!45;CL:0002194!1.24e-17!63;CL:0000576!1.24e-17!63;CL:0000040!1.24e-17!63;CL:0000559!1.24e-17!63;CL:0002009!9.42e-17!65;CL:0000839!8.77e-15!70;CL:0000766!9.68e-15!76;CL:0000557!2.00e-14!71;CL:0002087!6.83e-08!119;CL:0000763!7.88e-08!112;CL:0000049!7.88e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.46e-23;39!CL:0000234;1.46e-23;39!CL:0000860;2.70e-20;33!CL:0002057;2.70e-20;33!CL:0000039;7.82e-15;7!CL:0000586;7.82e-15;7!CL:0000235;1.38e-09;6!CL:0000766;2.57e-08;69!CL:0000576;7.46e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.58e-22,48;CL:0000234,6.58e-22,48;CL:0002194,5.79e-17,59;CL:0000576,5.79e-17,59;CL:0000040,5.79e-17,59;CL:0000559,5.79e-17,59;CL:0002009,2.51e-16,61;CL:0000860,1.53e-15,42;CL:0002057,1.53e-15,42;CL:0000039,6.48e-15,7;CL:0000586,6.48e-15,7;CL:0000839,6.73e-15,66;CL:0000557,1.23e-14,67;CL:0000766,1.92e-13,72;CL:0000235,1.68e-09,6;CL:0002087,1.16e-08,115;CL:0002031,3.48e-08,120;CL:0000763,4.26e-08,108;CL:0000049,4.26e-08,108;CL:0000738,6.84e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-12;42!UBERON:0009117;2.04e-10;10!UBERON:0005564;2.04e-10;10!UBERON:0006222;2.42e-07;1!UBERON:0005425;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.29e-24!34;UBERON:0003528!2.29e-24!34;UBERON:0001869!3.05e-24!32;UBERON:0002780!4.89e-24!41;UBERON:0001890!4.89e-24!41;UBERON:0006240!4.89e-24!41;UBERON:0001893!6.84e-24!34;UBERON:0003080!3.15e-23!42;UBERON:0001049!4.40e-23!57;UBERON:0005068!4.40e-23!57;UBERON:0006241!4.40e-23!57;UBERON:0007135!4.40e-23!57;UBERON:0002791!9.39e-23!33;UBERON:0002616!6.77e-22!59;UBERON:0000955!2.20e-20!69;UBERON:0006238!2.20e-20!69;UBERON:0000956!2.48e-19!25;UBERON:0000203!2.48e-19!25;UBERON:0000073!3.26e-19!94;UBERON:0001016!3.26e-19!94;UBERON:0001950!8.54e-19!20;UBERON:0002619!1.13e-18!22;UBERON:0001017!1.97e-18!82;UBERON:0005743!5.62e-17!86;UBERON:0002346!4.19e-13!90;UBERON:0003056!5.12e-13!61;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0002371!1.24e-11!80;UBERON:0007023!1.37e-11!115;UBERON:0002193!3.01e-10!112;UBERON:0001474!3.97e-10!86;UBERON:0000924!6.34e-10!173;UBERON:0006601!6.34e-10!173;UBERON:0002405!1.13e-09!115;UBERON:0004121!2.20e-09!169;UBERON:0004765!5.36e-09!101;UBERON:0001434!5.36e-09!101;UBERON:0000033!1.03e-08!123;UBERON:0000468!2.02e-08!659;UBERON:0002390!3.99e-08!102;UBERON:0003061!3.99e-08!102;UBERON:0000467!4.91e-08!625;UBERON:0000480!5.75e-08!626;UBERON:0002021!8.15e-08!5;UBERON:0001871!8.35e-08!7;UBERON:0000153!8.42e-08!129;UBERON:0007811!8.42e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.18e-13;2!UBERON:0000473;5.38e-13;8!UBERON:0002021;1.13e-11;5!UBERON:0001872;1.20e-11;5!UBERON:0001950;5.08e-10;20!UBERON:0003135;1.77e-09;11!UBERON:0002780;2.56e-09;41!UBERON:0001890;2.56e-09;41!UBERON:0002619;4.22e-09;22!UBERON:0000988;5.72e-09;3!UBERON:0001894;2.77e-08;7!UBERON:0000956;5.51e-08;25!UBERON:0000203;5.51e-08;25!UBERON:0002581;2.42e-07;1!UBERON:0000941;2.42e-07;1!UBERON:0001785;2.42e-07;1!UBERON:0002464;2.42e-07;1!UBERON:0004904;2.42e-07;1!UBERON:0001021;2.42e-07;1!UBERON:0003296;6.25e-07;4!UBERON:0010133;6.25e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.33e-13,2;UBERON:0000473,4.57e-13,8;UBERON:0002371,1.34e-12,76;UBERON:0001872,1.25e-11,5;UBERON:0000073,1.57e-11,53;UBERON:0002616,1.57e-11,53;UBERON:0001474,1.73e-11,82;UBERON:0002021,2.39e-11,5;UBERON:0001049,8.09e-11,56;UBERON:0005068,8.09e-11,56;UBERON:0006241,8.09e-11,56;UBERON:0007135,8.09e-11,56;UBERON:0004765,3.09e-10,90;UBERON:0002780,3.36e-10,41;UBERON:0001890,3.36e-10,41;UBERON:0003080,3.36e-10,41;UBERON:0006240,3.36e-10,41;UBERON:0000955,3.50e-10,68;UBERON:0006238,3.50e-10,68;UBERON:0001016,4.03e-10,89;UBERON:0001950,7.24e-10,20;UBERON:0002405,8.02e-10,93;UBERON:0001017,8.40e-10,81;UBERON:0003135,1.58e-09,11;UBERON:0002390,3.45e-09,98;UBERON:0003061,3.45e-09,98;UBERON:0000988,3.67e-09,3;UBERON:0002619,5.83e-09,22;UBERON:0001434,5.94e-09,100;UBERON:0001894,2.36e-08,7;UBERON:0006222,2.36e-08,7;UBERON:0003075,3.25e-08,82;UBERON:0007284,3.25e-08,82;UBERON:0002193,4.26e-08,108;UBERON:0003056,5.17e-08,61;UBERON:0000956,7.29e-08,25;UBERON:0000203,7.29e-08,25;UBERON:0002346,9.78e-08,86;UBERON:0003528,1.27e-07,34;UBERON:0002020,1.27e-07,34;UBERON:0000941,1.83e-07,1;UBERON:0001785,1.83e-07,1;UBERON:0002464,1.83e-07,1;UBERON:0004904,1.83e-07,1;UBERON:0001021,1.83e-07,1;UBERON:0003902,1.83e-07,1;UBERON:0005425,1.83e-07,1;UBERON:0002581,2.21e-07,1;UBERON:0003296,5.72e-07,4;UBERON:0010133,5.72e-07,4 | |||
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| ||
|short_description=p20@BCAT1 | |||
}} | }} |
Latest revision as of 22:01, 17 September 2015
Short description: | p20@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -124bp_to_ENST00000539282, NM_001178093_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | F5H5E4B7Z2M5P54687 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.58e-22 | 48 |
phagocyte | 6.58e-22 | 48 |
monopoietic cell | 5.79e-17 | 59 |
monocyte | 5.79e-17 | 59 |
monoblast | 5.79e-17 | 59 |
promonocyte | 5.79e-17 | 59 |
macrophage dendritic cell progenitor | 2.51e-16 | 61 |
classical monocyte | 1.53e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-15 | 42 |
germ line cell | 6.48e-15 | 7 |
germ cell | 6.48e-15 | 7 |
myeloid lineage restricted progenitor cell | 6.73e-15 | 66 |
granulocyte monocyte progenitor cell | 1.23e-14 | 67 |
myeloid leukocyte | 1.92e-13 | 72 |
macrophage | 1.68e-09 | 6 |
nongranular leukocyte | 1.16e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.48e-08 | 120 |
myeloid cell | 4.26e-08 | 108 |
common myeloid progenitor | 4.26e-08 | 108 |
leukocyte | 6.84e-07 | 136 |