FFCP PHASE1:Hg19::chr5:65114617..65114628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57486 | |EntrezGene=57486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16058 | |HGNC=16058 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000515595_5end | |association_with_transcript=68bp_to_ENST00000515595_5end | ||
|cluster_id=chr5:65114617..65114628,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_NLN_5end | |description=CAGE_peak_5_at_NLN_5end | ||
|id=chr5:65114617..65114628,+ | |id=chr5:65114617..65114628,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;9.48e-18;1!UBERON:0005425;9.48e-18;1!UBERON:0006601;1.90e-08;82!UBERON:0002532;4.09e-07;206!UBERON:0010316;4.09e-07;206!UBERON:0006241;6.50e-07;3!UBERON:0003057;6.50e-07;3!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.89e-73!57;UBERON:0005068!2.89e-73!57;UBERON:0006241!2.89e-73!57;UBERON:0007135!2.89e-73!57;UBERON:0002616!1.85e-61!59;UBERON:0007023!3.81e-57!115;UBERON:0001017!7.30e-55!82;UBERON:0000955!1.48e-54!69;UBERON:0006238!1.48e-54!69;UBERON:0002780!1.82e-52!41;UBERON:0001890!1.82e-52!41;UBERON:0006240!1.82e-52!41;UBERON:0005743!5.25e-52!86;UBERON:0003080!4.15e-51!42;UBERON:0000073!1.44e-49!94;UBERON:0001016!1.44e-49!94;UBERON:0003075!2.53e-49!86;UBERON:0007284!2.53e-49!86;UBERON:0002020!7.03e-48!34;UBERON:0003528!7.03e-48!34;UBERON:0001893!7.96e-48!34;UBERON:0002346!8.24e-47!90;UBERON:0002791!1.42e-44!33;UBERON:0001869!6.28e-41!32;UBERON:0003056!1.23e-33!61;UBERON:0002619!4.50e-32!22;UBERON:0001950!1.70e-30!20;UBERON:0000033!9.09e-30!123;UBERON:0000153!4.72e-28!129;UBERON:0007811!4.72e-28!129;UBERON:0000956!5.24e-28!25;UBERON:0000203!5.24e-28!25;UBERON:0002298!1.33e-26!8;UBERON:0004121!2.13e-24!169;UBERON:0000924!1.17e-23!173;UBERON:0006601!1.17e-23!173;UBERON:0002308!6.46e-23!9;UBERON:0000125!6.46e-23!9;UBERON:0003076!2.07e-22!15;UBERON:0003057!2.07e-22!15;UBERON:0004732!1.28e-20!13;UBERON:0000025!1.06e-17!194;UBERON:0004733!3.65e-17!12;UBERON:0002028!3.65e-17!12;UBERON:0007277!3.65e-17!12;UBERON:0000200!4.26e-17!6;UBERON:0002420!1.38e-16!9;UBERON:0007245!1.38e-16!9;UBERON:0010009!1.38e-16!9;UBERON:0010011!1.38e-16!9;UBERON:0000454!1.38e-16!9;UBERON:0009663!2.14e-15!7;UBERON:0006331!3.59e-14!3;UBERON:0001896!5.09e-14!3;UBERON:0005290!5.09e-14!3;UBERON:0010096!5.09e-14!3;UBERON:0000988!5.80e-14!3;UBERON:0000064!2.56e-13!219;UBERON:0002771!7.72e-13!3;UBERON:0004111!9.28e-13!241;UBERON:0001871!1.63e-12!7;UBERON:0000483!1.20e-10!309;UBERON:0000119!1.82e-10!312;UBERON:0000477!2.08e-10!286;UBERON:0001897!2.62e-10!2;UBERON:0005162!4.08e-10!2;UBERON:0000122!4.08e-10!2;UBERON:0001875!6.07e-10!2;UBERON:0006514!6.07e-10!2;UBERON:0002148!7.90e-10!2;UBERON:0009662!7.90e-10!2;UBERON:0000062!3.91e-09!511;UBERON:0000475!1.73e-08!365;UBERON:0001872!2.20e-08!5;UBERON:0002021!5.38e-08!5;UBERON:0002680!5.62e-08!9;UBERON:0001895!5.62e-08!9;UBERON:0010092!5.62e-08!9;UBERON:0000349!7.56e-08!5;UBERON:0000481!1.36e-07!347;UBERON:0002240!5.64e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!2.89e-73!57;UBERON:0005068!2.89e-73!57;UBERON:0006241!2.89e-73!57;UBERON:0007135!2.89e-73!57;UBERON:0002616!1.85e-61!59;UBERON:0007023!3.81e-57!115;UBERON:0001017!7.30e-55!82;UBERON:0000955!1.48e-54!69;UBERON:0006238!1.48e-54!69;UBERON:0002780!1.82e-52!41;UBERON:0001890!1.82e-52!41;UBERON:0006240!1.82e-52!41;UBERON:0005743!5.25e-52!86;UBERON:0003080!4.15e-51!42;UBERON:0000073!1.44e-49!94;UBERON:0001016!1.44e-49!94;UBERON:0003075!2.53e-49!86;UBERON:0007284!2.53e-49!86;UBERON:0002020!7.03e-48!34;UBERON:0003528!7.03e-48!34;UBERON:0001893!7.96e-48!34;UBERON:0002346!8.24e-47!90;UBERON:0002791!1.42e-44!33;UBERON:0001869!6.28e-41!32;UBERON:0003056!1.23e-33!61;UBERON:0002619!4.50e-32!22;UBERON:0001950!1.70e-30!20;UBERON:0000033!9.09e-30!123;UBERON:0000153!4.72e-28!129;UBERON:0007811!4.72e-28!129;UBERON:0000956!5.24e-28!25;UBERON:0000203!5.24e-28!25;UBERON:0002298!1.33e-26!8;UBERON:0004121!2.13e-24!169;UBERON:0000924!1.17e-23!173;UBERON:0006601!1.17e-23!173;UBERON:0002308!6.46e-23!9;UBERON:0000125!6.46e-23!9;UBERON:0003076!2.07e-22!15;UBERON:0003057!2.07e-22!15;UBERON:0004732!1.28e-20!13;UBERON:0000025!1.06e-17!194;UBERON:0004733!3.65e-17!12;UBERON:0002028!3.65e-17!12;UBERON:0007277!3.65e-17!12;UBERON:0000200!4.26e-17!6;UBERON:0002420!1.38e-16!9;UBERON:0007245!1.38e-16!9;UBERON:0010009!1.38e-16!9;UBERON:0010011!1.38e-16!9;UBERON:0000454!1.38e-16!9;UBERON:0009663!2.14e-15!7;UBERON:0006331!3.59e-14!3;UBERON:0001896!5.09e-14!3;UBERON:0005290!5.09e-14!3;UBERON:0010096!5.09e-14!3;UBERON:0000988!5.80e-14!3;UBERON:0000064!2.56e-13!219;UBERON:0002771!7.72e-13!3;UBERON:0004111!9.28e-13!241;UBERON:0001871!1.63e-12!7;UBERON:0000483!1.20e-10!309;UBERON:0000119!1.82e-10!312;UBERON:0000477!2.08e-10!286;UBERON:0001897!2.62e-10!2;UBERON:0005162!4.08e-10!2;UBERON:0000122!4.08e-10!2;UBERON:0001875!6.07e-10!2;UBERON:0006514!6.07e-10!2;UBERON:0002148!7.90e-10!2;UBERON:0009662!7.90e-10!2;UBERON:0000062!3.91e-09!511;UBERON:0000475!1.73e-08!365;UBERON:0001872!2.20e-08!5;UBERON:0002021!5.38e-08!5;UBERON:0002680!5.62e-08!9;UBERON:0001895!5.62e-08!9;UBERON:0010092!5.62e-08!9;UBERON:0000349!7.56e-08!5;UBERON:0000481!1.36e-07!347;UBERON:0002240!5.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;4.66e-34;2!UBERON:0010225;4.66e-34;2!UBERON:0005162;1.17e-33;2!UBERON:0000122;1.17e-33;2!UBERON:0002298;3.38e-25;6!UBERON:0001896;8.03e-23;3!UBERON:0005290;8.03e-23;3!UBERON:0001894;7.05e-22;7!UBERON:0004732;1.65e-20;13!UBERON:0000073;5.92e-20;53!UBERON:0002616;5.92e-20;53!UBERON:0002038;2.66e-18;1!UBERON:0009661;2.66e-18;1!UBERON:0002950;2.66e-18;1!UBERON:0001891;2.66e-18;1!UBERON:0002336;9.48e-18;1!UBERON:0000941;9.48e-18;1!UBERON:0001785;9.48e-18;1!UBERON:0002464;9.48e-18;1!UBERON:0004904;9.48e-18;1!UBERON:0011215;9.48e-18;1!UBERON:0001018;9.48e-18;1!UBERON:0001021;9.48e-18;1!UBERON:0002473;9.48e-18;1!UBERON:0005340;9.48e-18;1!UBERON:0003544;9.48e-18;1!UBERON:0005970;9.48e-18;1!UBERON:0002316;9.48e-18;1!UBERON:0001020;9.48e-18;1!UBERON:0002437;9.48e-18;1!UBERON:0002784;1.39e-17;4!UBERON:0004733;5.93e-13;12!UBERON:0002028;5.93e-13;12!UBERON:0001016;7.54e-13;83!UBERON:0002780;6.10e-11;41!UBERON:0001890;6.10e-11;41!UBERON:0009663;1.26e-10;7!UBERON:0001017;3.41e-10;75!UBERON:0001875;9.46e-10;2!UBERON:0006514;9.46e-10;2!UBERON:0003714;1.51e-09;2!UBERON:0000955;4.34e-09;68!UBERON:0002420;1.83e-08;9!UBERON:0000125;1.83e-08;9!UBERON:0007245;1.83e-08;9!UBERON:0002308;1.83e-08;9!UBERON:0010009;1.83e-08;9!UBERON:0010011;1.83e-08;9!UBERON:0000454;1.83e-08;9!UBERON:0007023;5.91e-08;114!UBERON:0002240;6.50e-07;3!UBERON:0005174;6.50e-07;3!UBERON:0001137;6.50e-07;3!UBERON:0000988;8.86e-07;3 | |||
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|short_description=p5@NLN | |short_description=p5@NLN | ||
}} | }} |
Latest revision as of 10:31, 18 September 2015
Short description: | p5@NLN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NLN_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 68bp_to_ENST00000515595_5end |
EntrezGene: | NLN |
HGNC: | 16058 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data