FFCP PHASE1:Hg19::chr21:42219138..42219161,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3039 | |||
|TSSclassifier=strong | |||
|UniProt=O60469 | |||
|association_with_transcript=-73bp_to_ENST00000400454_5end | |||
|cluster_id=chr21:42219138..42219161,- | |||
|coexpression_cluster_id=C1260 | |||
|description=CAGE_peak_3_at_DSCAM_5end | |||
|id=chr21:42219138..42219161,- | |||
|ontology_enrichment_celltype=CL:0002159!2.60e-12!13;CL:0002077!2.82e-10!33;CL:0000221!1.48e-07!71;CL:0000362!1.54e-07!8;CL:0000240!1.77e-07!6;CL:0000311!1.77e-07!6;CL:0000079!1.77e-07!6;CL:0000237!1.77e-07!6;CL:0000036!1.77e-07!6;CL:0000357!1.77e-07!6;CL:0000114!1.77e-07!6;CL:0000197!4.73e-07!6;CL:0000098!4.73e-07!6;CL:0002167!4.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.41e-07;3!CL:0002159;5.95e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.43e-07,3;CL:0002159,5.20e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-17;82!UBERON:0006241;1.10e-07;3!UBERON:0003057;1.10e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.59e-54!57;UBERON:0005068!8.59e-54!57;UBERON:0006241!8.59e-54!57;UBERON:0007135!8.59e-54!57;UBERON:0001017!4.03e-51!82;UBERON:0005743!1.27e-49!86;UBERON:0000073!2.36e-48!94;UBERON:0001016!2.36e-48!94;UBERON:0002616!2.32e-44!59;UBERON:0002780!2.92e-44!41;UBERON:0001890!2.92e-44!41;UBERON:0006240!2.92e-44!41;UBERON:0000955!3.28e-44!69;UBERON:0006238!3.28e-44!69;UBERON:0003080!6.84e-43!42;UBERON:0000924!3.83e-39!173;UBERON:0006601!3.83e-39!173;UBERON:0004121!7.74e-38!169;UBERON:0002346!4.80e-37!90;UBERON:0001893!2.04e-36!34;UBERON:0002020!2.44e-36!34;UBERON:0003528!2.44e-36!34;UBERON:0003075!6.28e-36!86;UBERON:0007284!6.28e-36!86;UBERON:0002791!4.73e-35!33;UBERON:0001869!6.24e-34!32;UBERON:0000033!1.32e-33!123;UBERON:0000153!2.74e-33!129;UBERON:0007811!2.74e-33!129;UBERON:0003056!2.82e-30!61;UBERON:0002619!1.02e-29!22;UBERON:0001950!5.28e-27!20;UBERON:0000956!2.56e-25!25;UBERON:0000203!2.56e-25!25;UBERON:0007023!4.00e-23!115;UBERON:0002420!1.10e-12!9;UBERON:0007245!1.10e-12!9;UBERON:0010009!1.10e-12!9;UBERON:0010011!1.10e-12!9;UBERON:0000454!1.10e-12!9;UBERON:0000475!1.62e-12!365;UBERON:0002308!1.71e-12!9;UBERON:0000125!1.71e-12!9;UBERON:0003076!8.13e-12!15;UBERON:0003057!8.13e-12!15;UBERON:0000064!3.68e-11!219;UBERON:0000483!3.60e-10!309;UBERON:0009663!5.77e-10!7;UBERON:0000119!7.26e-10!312;UBERON:0004732!1.40e-09!13;UBERON:0001871!1.45e-09!7;UBERON:0000200!1.76e-09!6;UBERON:0001894!3.97e-09!7;UBERON:0006222!3.97e-09!7;UBERON:0002298!9.47e-09!8;UBERON:0001872!9.56e-09!5;UBERON:0004733!1.75e-08!12;UBERON:0002028!1.75e-08!12;UBERON:0007277!1.75e-08!12;UBERON:0000349!2.13e-08!5;UBERON:0002021!3.99e-08!5;UBERON:0000025!4.29e-08!194;UBERON:0004111!1.25e-07!241;UBERON:0000062!3.16e-07!511;UBERON:0000477!8.65e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.75e-53;34!UBERON:0003528;8.50e-53;34!UBERON:0002020;8.50e-53;34!UBERON:0001869;3.97e-52;32!UBERON:0002791;8.34e-52;32!UBERON:0002619;2.19e-50;22!UBERON:0002780;3.16e-47;41!UBERON:0001890;3.16e-47;41!UBERON:0001950;9.52e-46;20!UBERON:0000956;8.80e-44;25!UBERON:0000203;8.80e-44;25!UBERON:0000073;1.93e-42;53!UBERON:0002616;1.93e-42;53!UBERON:0001017;3.44e-30;75!UBERON:0000955;1.30e-28;68!UBERON:0001016;1.99e-25;83!UBERON:0002420;1.29e-20;9!UBERON:0007245;1.29e-20;9!UBERON:0010009;1.29e-20;9!UBERON:0010011;1.29e-20;9!UBERON:0000454;1.29e-20;9!UBERON:0000125;2.66e-20;9!UBERON:0002308;2.66e-20;9!UBERON:0009663;5.63e-16;7!UBERON:0000200;4.05e-15;6!UBERON:0002298;2.39e-14;6!UBERON:0001872;7.64e-14;5!UBERON:0001871;2.62e-13;6!UBERON:0004732;3.12e-13;13!UBERON:0000349;3.13e-13;5!UBERON:0002021;6.29e-13;5!UBERON:0004733;1.80e-11;12!UBERON:0002028;1.80e-11;12!UBERON:0007023;3.74e-11;114!UBERON:0000369;5.12e-10;4!UBERON:0002435;5.12e-10;4!UBERON:0000204;5.12e-10;4!UBERON:0011216;5.21e-10;132!UBERON:0000988;2.39e-08;3!UBERON:0001870;2.42e-08;3!UBERON:0001896;1.10e-07;3!UBERON:0002240;1.10e-07;3!UBERON:0005174;1.10e-07;3!UBERON:0005383;1.10e-07;3!UBERON:0005290;1.10e-07;3!UBERON:0001137;1.10e-07;3!UBERON:0005382;1.10e-07;3!UBERON:0001949;1.41e-07;3!UBERON:0004121;3.66e-07;165!UBERON:0010314;4.87e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.89694817844431,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0.710019185033229,0.10075209822764,0,1.35282597214308,2.45471508531751,3.72845974005705,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,1.1240175325762,1.60846355858609,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,0.141775097242386,0.268675568108545,1.45316969256981,2.30029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,13.0139853857622,3.09315525111078,3.51784157202132,0.637938751653163,0,0,0,0,0,0,0.415941723061614,1.07057393278297,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0,0.661139661443912,0,2.29702882490251,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,6.33012373847307,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,6.78532922266653,2.69027484669369,13.9729658600836,0,0,0,0,0,0,3.79217710565611,0.291604613383254,0,1.77148277162768,4.70326110639091,1.52581736317083,1.54810963903714,0.591095237907095,3.51016635446356,0,0,0,0,0,0,0,0,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,4.17887024480198,0,0.937057782901357,0,0,0,0,0,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97223400862852,0.677942222341597,0,0.19871461170299,6.07783641176436,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0.288950589901519,2.40168115483916,2.0535806833799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,6.40156008724405,0,0,0,0,0,6.56095211906666,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,3.36135686540031,4.89260626447953,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.02686674176478,6.00916467391199,2.29363678276028,1.77486482458964,4.40884460883822,0,0.124980407962107,0,0,0,4.21501415226193,0.28984205722165,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,5.66859588222096,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0.76736622782191,0,4.4034463719651,0,0,21.47006693027,0,0,0,0,4.80342448971282,0,0,5.3952549081026,1.41696576325585,5.10828348982884,3.07674546361133,7.31007919042983,7.95308403338506,5.65164759711479,2.85538840518309,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,5.53808193870836,6.24862478891078,7.85409826704499,5.83425453783943,12.580420607419,0,0,5.100266086429,0,1.60710550763486,0.672567444437648,0.606965604236632,2.50428410486427,0.0887023701626388,0,0,5.91336676898436,5.78800407353072,0,0,0,2.67096502857203,0,0,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0.218559560503957,0,0,0.942706188406504,1.96308467114945,2.67341760294377,4.6492130034174,0.169927114687817,0.563903507879121,1.16024198352439,0,0,3.88184358887261,0,0,0,2.43677291357467,0,5.64329368584592,6.54526035510566,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,3.31667775783512,3.51672185930444,0,0.476128862927481,0,0.124149428591716,0.448527450322454,0,0.202117188958219,0,0,0,0,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@DSCAM | |||
}} |
Latest revision as of 12:08, 18 September 2015
Short description: | p3@DSCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DSCAM_5end |
Coexpression cluster: | C1260_neuroectodermal_parietal_occipital_insula_amygdala_extraskeletal_frontal |
Association with transcript: | -73bp_to_ENST00000400454_5end |
EntrezGene: | DSCAM |
HGNC: | 3039 |
UniProt: | O60469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.43e-07 | 3 |
general ecto-epithelial cell | 5.20e-07 | 14 |