FFCP PHASE1:Hg19::chr14:29237009..29237049,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:29237009..29237049,+ to FFCP PHASE1:Hg19::chr14:29237009..29237049,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=79bp_to_X74144_5end | |||
|cluster_id=chr14:29237009..29237049,+ | |||
|coexpression_cluster_id=C3421 | |||
|description=CAGE_peak_4_at_FOXG1_5end | |||
|id=chr14:29237009..29237049,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.65e-14!25;CL:0000243!6.25e-12!15;CL:0000125!6.25e-12!15;CL:0000030!6.25e-12!15;CL:0000339!6.25e-12!15;CL:0000095!2.61e-10!17;CL:0000123!2.61e-10!17;CL:0000128!4.75e-10!7;CL:0000126!4.75e-10!7;CL:0000127!4.75e-10!7;CL:0002453!4.75e-10!7;CL:0000133!1.36e-08!59;CL:0000221!8.46e-07!71;CL:0000306!8.98e-07!4;CL:0002222!8.98e-07!4;CL:0002224!8.98e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.76e-13;25!CL:0000128;1.23e-08;7!CL:0000126;1.23e-08;7!CL:0000127;1.23e-08;7!CL:0002605;3.24e-08;3!CL:0000243;4.97e-08;15!CL:0000125;4.97e-08;15!CL:0000064;2.03e-07;3!CL:0000067;2.03e-07;3!CL:0005012;2.03e-07;3!CL:0002304;2.03e-07;3!CL:0000095;4.85e-07;17!CL:0000047;7.19e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.33e-13,25;CL:0000047,5.54e-09,8;CL:0000128,9.47e-09,7;CL:0000126,9.47e-09,7;CL:0000127,9.47e-09,7;CL:0002453,9.47e-09,7;CL:0002605,2.53e-08,3;CL:0000243,3.81e-08,15;CL:0000125,3.81e-08,15;CL:0000030,3.81e-08,15;CL:0000339,3.81e-08,15;CL:0000064,1.79e-07,3;CL:0000067,1.79e-07,3;CL:0005012,1.79e-07,3;CL:0002304,1.79e-07,3;CL:0000095,3.84e-07,17;CL:0000123,3.84e-07,17;CL:0000133,7.08e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.69e-10;10!UBERON:0006601;4.28e-09;82!CL:0000339;4.97e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-48!82;UBERON:0005743!6.77e-47!86;UBERON:0002780!6.73e-46!41;UBERON:0001890!6.73e-46!41;UBERON:0006240!6.73e-46!41;UBERON:0001869!1.06e-45!32;UBERON:0001893!3.10e-45!34;UBERON:0000073!3.31e-45!94;UBERON:0001016!3.31e-45!94;UBERON:0003080!1.64e-44!42;UBERON:0000955!4.71e-44!69;UBERON:0006238!4.71e-44!69;UBERON:0003056!5.18e-44!61;UBERON:0002791!9.43e-44!33;UBERON:0002020!1.97e-39!34;UBERON:0003528!1.97e-39!34;UBERON:0003075!1.52e-38!86;UBERON:0007284!1.52e-38!86;UBERON:0000153!8.39e-37!129;UBERON:0007811!8.39e-37!129;UBERON:0001049!1.31e-36!57;UBERON:0005068!1.31e-36!57;UBERON:0006241!1.31e-36!57;UBERON:0007135!1.31e-36!57;UBERON:0002616!1.34e-36!59;UBERON:0002346!4.72e-36!90;UBERON:0000956!1.00e-35!25;UBERON:0000203!1.00e-35!25;UBERON:0000033!3.28e-34!123;UBERON:0002619!1.54e-31!22;UBERON:0004121!1.17e-29!169;UBERON:0000924!1.82e-28!173;UBERON:0006601!1.82e-28!173;UBERON:0001950!2.14e-28!20;UBERON:0007023!2.41e-16!115;UBERON:0000025!6.08e-15!194;UBERON:0000483!1.93e-12!309;UBERON:0000475!2.41e-12!365;UBERON:0000119!4.11e-12!312;UBERON:0000064!1.45e-11!219;UBERON:0002420!3.07e-11!9;UBERON:0007245!3.07e-11!9;UBERON:0010009!3.07e-11!9;UBERON:0010011!3.07e-11!9;UBERON:0000454!3.07e-11!9;UBERON:0001871!2.43e-10!7;UBERON:0000200!4.35e-10!6;UBERON:0000477!7.08e-10!286;UBERON:0004111!9.84e-10!241;UBERON:0000349!2.58e-09!5;UBERON:0002021!1.30e-08!5;UBERON:0000922!1.43e-08!612;UBERON:0001872!1.80e-08!5;UBERON:0009663!2.59e-08!7;UBERON:0000481!3.77e-08!347;UBERON:0007625!7.74e-08!11;UBERON:0000923!8.30e-08!604;UBERON:0005291!8.30e-08!604;UBERON:0006598!8.30e-08!604;UBERON:0002532!8.30e-08!604;UBERON:0002050!9.58e-08!605;UBERON:0005423!9.58e-08!605;UBERON:0000369!2.12e-07!4;UBERON:0002435!2.12e-07!4;UBERON:0000204!2.12e-07!4;UBERON:0010082!2.12e-07!4;UBERON:0000467!2.22e-07!625;UBERON:0000480!2.55e-07!626;UBERON:0010077!8.98e-07!4;UBERON:0005389!8.98e-07!4;UBERON:0000484!8.98e-07!4;UBERON:0002546!8.98e-07!4;UBERON:0000965!8.98e-07!4;UBERON:0001803!8.98e-07!4;UBERON:0003073!8.98e-07!4;UBERON:0005426!8.98e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.76e-66;32!UBERON:0001893;6.84e-64;34!UBERON:0002791;2.36e-62;32!UBERON:0000956;3.16e-57;25!UBERON:0000203;3.16e-57;25!UBERON:0003528;7.51e-57;34!UBERON:0002020;7.51e-57;34!UBERON:0002780;8.12e-52;41!UBERON:0001890;8.12e-52;41!UBERON:0002619;1.63e-50;22!UBERON:0001950;2.16e-45;20!UBERON:0000073;1.09e-31;53!UBERON:0002616;1.09e-31;53!UBERON:0000955;5.82e-28;68!UBERON:0001017;2.03e-27;75!UBERON:0001016;2.40e-21;83!UBERON:0002420;2.13e-17;9!UBERON:0007245;2.13e-17;9!UBERON:0010009;2.13e-17;9!UBERON:0010011;2.13e-17;9!UBERON:0000454;2.13e-17;9!UBERON:0000200;2.33e-15;6!UBERON:0000349;3.93e-14;5!UBERON:0001871;7.77e-14;6!UBERON:0002021;5.42e-13;5!UBERON:0001872;8.42e-13;5!UBERON:0009663;1.24e-12;7!UBERON:0000369;4.54e-11;4!UBERON:0002435;4.54e-11;4!UBERON:0000204;4.54e-11;4!UBERON:0000125;1.18e-09;9!UBERON:0002308;1.18e-09;9!UBERON:0005383;1.30e-08;3!UBERON:0005382;1.30e-08;3!UBERON:0001870;2.34e-08;3!UBERON:0011216;5.61e-08;132!UBERON:0001778;2.03e-07;3!UBERON:0001775;2.03e-07;3!UBERON:0007625;2.03e-07;11!UBERON:0007023;4.51e-07;114!UBERON:0010314;4.84e-07;132!UBERON:0001954;9.72e-07;2!UBERON:0003022;9.72e-07;2!UBERON:0002421;9.72e-07;2!UBERON:0002600;9.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.25e-73,32;UBERON:0001893,3.49e-73,34;UBERON:0002780,2.66e-71,41;UBERON:0001890,2.66e-71,41;UBERON:0003080,2.66e-71,41;UBERON:0006240,2.66e-71,41;UBERON:0002791,9.23e-69,32;UBERON:0001017,1.16e-66,81;UBERON:0003528,2.72e-64,34;UBERON:0002020,2.72e-64,34;UBERON:0003056,1.37e-62,61;UBERON:0000955,2.01e-60,68;UBERON:0006238,2.01e-60,68;UBERON:0001016,9.04e-59,89;UBERON:0000956,2.28e-57,25;UBERON:0000203,2.28e-57,25;UBERON:0000073,2.96e-56,53;UBERON:0002616,2.96e-56,53;UBERON:0001049,1.02e-52,56;UBERON:0005068,1.02e-52,56;UBERON:0006241,1.02e-52,56;UBERON:0007135,1.02e-52,56;UBERON:0002619,1.50e-50,22;UBERON:0003075,2.50e-48,82;UBERON:0007284,2.50e-48,82;UBERON:0002346,1.56e-45,86;UBERON:0001950,1.99e-45,20;UBERON:0010371,1.33e-35,104;UBERON:0004121,3.20e-34,171;UBERON:0000924,3.20e-34,171;UBERON:0006601,3.20e-34,171;UBERON:0011216,5.56e-29,223;UBERON:0010314,1.37e-28,132;UBERON:0007023,4.99e-18,114;UBERON:0002420,1.61e-17,9;UBERON:0007245,1.61e-17,9;UBERON:0010009,1.61e-17,9;UBERON:0010011,1.61e-17,9;UBERON:0000454,1.61e-17,9;UBERON:0000200,2.34e-15,6;UBERON:0000025,5.30e-15,192;UBERON:0000349,4.16e-14,5;UBERON:0001871,7.80e-14,6;UBERON:0002021,5.65e-13,5;UBERON:0009663,8.99e-13,7;UBERON:0001872,9.57e-13,5;UBERON:0000483,7.20e-12,306;UBERON:0000119,1.27e-11,309;UBERON:0000369,5.11e-11,4;UBERON:0002435,5.11e-11,4;UBERON:0000204,5.11e-11,4;UBERON:0010082,5.11e-11,4;UBERON:0004111,1.92e-10,240;UBERON:0000125,9.23e-10,9;UBERON:0002308,9.23e-10,9;UBERON:0005423,6.91e-09,581;UBERON:0000923,1.16e-08,560;UBERON:0010316,1.16e-08,560;UBERON:0005291,1.16e-08,560;UBERON:0006598,1.16e-08,560;UBERON:0010317,1.16e-08,560;UBERON:0002532,1.16e-08,560;UBERON:0005383,1.48e-08,3;UBERON:0005382,1.48e-08,3;UBERON:0002050,1.77e-08,564;UBERON:0001870,1.87e-08,3;UBERON:0000922,2.15e-08,592;UBERON:0001778,1.79e-07,3;UBERON:0001775,1.79e-07,3;UBERON:0007625,2.18e-07,11;UBERON:0001954,9.73e-07,2;UBERON:0003022,9.73e-07,2;UBERON:0002421,9.73e-07,2;UBERON:0002600,9.73e-07,2 | |||
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|short_description=p4@FOXG1 | |||
}} | }} |
Latest revision as of 16:30, 19 September 2015
Short description: | p4@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXG1_5end |
Coexpression cluster: | C3421_Neural_caudate_medulloblastoma_Neurons_small_Astrocyte_putamen |
Association with transcript: | 79bp_to_X74144_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.33e-13 | 25 |
neuronal stem cell | 5.54e-09 | 8 |
oligodendrocyte | 9.47e-09 | 7 |
macroglial cell | 9.47e-09 | 7 |
astrocyte | 9.47e-09 | 7 |
oligodendrocyte precursor cell | 9.47e-09 | 7 |
astrocyte of the cerebral cortex | 2.53e-08 | 3 |
glial cell (sensu Vertebrata) | 3.81e-08 | 15 |
glial cell | 3.81e-08 | 15 |
glioblast | 3.81e-08 | 15 |
glioblast (sensu Vertebrata) | 3.81e-08 | 15 |
ciliated cell | 1.79e-07 | 3 |
ciliated epithelial cell | 1.79e-07 | 3 |
multi-ciliated epithelial cell | 1.79e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.79e-07 | 3 |
neuron associated cell | 3.84e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.84e-07 | 17 |
neurectodermal cell | 7.08e-07 | 59 |