FFCP PHASE1:Hg19::chr6:99282475..99282501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5454 | |EntrezGene=5454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9215 | |HGNC=9215 | ||
|TSSclassifier=strong | |||
|UniProt=P20265,B3KTH8 | |UniProt=P20265,B3KTH8 | ||
|association_with_transcript=-78bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | |association_with_transcript=-78bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | ||
|cluster_id=chr6:99282475..99282501,+ | |||
|coexpression_cluster_id=C2872 | |coexpression_cluster_id=C2872 | ||
|description=CAGE_peak_1_at_POU3F2_5end | |description=CAGE_peak_1_at_POU3F2_5end | ||
|id=chr6:99282475..99282501,+ | |id=chr6:99282475..99282501,+ | ||
|ontology_enrichment_celltype=CL:0002319;2.33e-12;25!CL:0000128;7.00e-10;7!CL:0000126;7.00e-10;7!CL:0000127;7.00e-10;7!CL:0002605;1.57e-09;3!CL:0000047;7.55e-07;2 | |ontology_enrichment_celltype=CL:0002319!1.70e-11!25;CL:0000133!8.91e-09!59;CL:0000333!1.89e-08!41;CL:0000128!2.59e-08!7;CL:0000126!2.59e-08!7;CL:0000127!2.59e-08!7;CL:0002453!2.59e-08!7;CL:0000095!1.33e-07!17;CL:0000123!1.33e-07!17 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;2.33e-12;25!CL:0000128;7.00e-10;7!CL:0000126;7.00e-10;7!CL:0000127;7.00e-10;7!CL:0002605;1.57e-09;3!CL:0000047;7.55e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002319,2.32e-12,25;CL:0000128,6.94e-10,7;CL:0000126,6.94e-10,7;CL:0000127,6.94e-10,7;CL:0002453,6.94e-10,7;CL:0002605,1.53e-09,3;CL:0000047,4.62e-09,8 | ||
|ontology_enrichment_uberon=UBERON:0001893;4.28e-58;34!UBERON:0002791;5.55e-57;32!UBERON:0003528;8.90e-57;34!UBERON:0002020;8.90e-57;34!UBERON:0001869;3.85e-56;32!UBERON:0002780;2.97e-48;41!UBERON:0001890;2.97e-48;41!UBERON:0000956;1.10e-47;25!UBERON:0000203;1.10e-47;25!UBERON:0000073;2.92e-46;53!UBERON:0002616;2.92e-46;53!UBERON:0002619;5.60e-40;22!UBERON:0001950;1.93e-35;20!UBERON:0001017;6.13e-34;75!UBERON:0001016;1.02e-30;83!UBERON:0000955;1.74e-30;68!UBERON:0000125;2.21e-21;9!UBERON:0002308;2.21e-21;9!UBERON:0002420;5.28e-21;9!UBERON:0007245;5.28e-21;9!UBERON:0010009;5.28e-21;9!UBERON:0010011;5.28e-21;9!UBERON:0000454;5.28e-21;9!UBERON:0004732;7.85e-18;13!UBERON:0009663;1.11e-16;7!UBERON:0004733;1.08e-15;12!UBERON:0002028;1.08e-15;12!UBERON:0002298;2.52e-15;6!UBERON:0002021;3.23e-13;5!UBERON:0001871;8.58e-13;6!UBERON:0000349;9.44e-13;5!UBERON:0011216;4.65e-11;132!UBERON:0000200;1.45e-10;6!UBERON:0007023;3.58e-10;114!UBERON:0000369;8.03e-10;4!UBERON:0002435;8.03e-10;4!UBERON:0000204;8.03e-10;4!UBERON:0002680;1.29e-09;9!UBERON:0001895;1.29e-09;9!UBERON:0001872;1.13e-08;5!UBERON:0000988;1.45e-08;3!UBERON:0001896;1.91e-08;3!UBERON:0005290;1.91e-08;3!UBERON:0002240;2.34e-08;3!UBERON:0005174;2.34e-08;3!UBERON:0001137;2.34e-08;3!UBERON:0005383;1.20e-07;3!UBERON:0005382;1.20e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;1.86e-17;82!UBERON:0006241;2.34e-08;3!UBERON:0003057;2.34e-08;3 | ||
|ontology_enrichment_disease=DOID:171!8.90e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;4.28e-58;34!UBERON:0002791;5.55e-57;32!UBERON:0003528;8.90e-57;34!UBERON:0002020;8.90e-57;34!UBERON:0001869;3.85e-56;32!UBERON:0002780;2.97e-48;41!UBERON:0001890;2.97e-48;41!UBERON:0000956;1.10e-47;25!UBERON:0000203;1.10e-47;25!UBERON:0000073;2.92e-46;53!UBERON:0002616;2.92e-46;53!UBERON:0002619;5.60e-40;22!UBERON:0001950;1.93e-35;20!UBERON:0001017;6.13e-34;75!UBERON:0001016;1.02e-30;83!UBERON:0000955;1.74e-30;68!UBERON:0000125;2.21e-21;9!UBERON:0002308;2.21e-21;9!UBERON:0002420;5.28e-21;9!UBERON:0007245;5.28e-21;9!UBERON:0010009;5.28e-21;9!UBERON:0010011;5.28e-21;9!UBERON:0000454;5.28e-21;9!UBERON:0004732;7.85e-18;13!UBERON:0009663;1.11e-16;7!UBERON:0004733;1.08e-15;12!UBERON:0002028;1.08e-15;12!UBERON:0002298;2.52e-15;6!UBERON:0002021;3.23e-13;5!UBERON:0001871;8.58e-13;6!UBERON:0000349;9.44e-13;5!UBERON:0011216;4.65e-11;132!UBERON:0000200;1.45e-10;6!UBERON:0007023;3.58e-10;114!UBERON:0000369;8.03e-10;4!UBERON:0002435;8.03e-10;4!UBERON:0000204;8.03e-10;4!UBERON:0002680;1.29e-09;9!UBERON:0001895;1.29e-09;9!UBERON:0001872;1.13e-08;5!UBERON:0000988;1.45e-08;3!UBERON:0001896;1.91e-08;3!UBERON:0005290;1.91e-08;3!UBERON:0002240;2.34e-08;3!UBERON:0005174;2.34e-08;3!UBERON:0001137;2.34e-08;3!UBERON:0005383;1.20e-07;3!UBERON:0005382;1.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.98e-90,89;UBERON:0001017,7.21e-90,81;UBERON:0001049,1.77e-89,56;UBERON:0005068,1.77e-89,56;UBERON:0006241,1.77e-89,56;UBERON:0007135,1.77e-89,56;UBERON:0000073,1.86e-82,53;UBERON:0002616,1.86e-82,53;UBERON:0000955,5.50e-74,68;UBERON:0006238,5.50e-74,68;UBERON:0001893,3.29e-68,34;UBERON:0003528,3.37e-68,34;UBERON:0002020,3.37e-68,34;UBERON:0002346,7.73e-68,86;UBERON:0002780,1.99e-67,41;UBERON:0001890,1.99e-67,41;UBERON:0003080,1.99e-67,41;UBERON:0006240,1.99e-67,41;UBERON:0002791,2.65e-63,32;UBERON:0001869,2.78e-63,32;UBERON:0003075,7.01e-63,82;UBERON:0007284,7.01e-63,82;UBERON:0010371,7.89e-54,104;UBERON:0004121,8.66e-53,171;UBERON:0000924,8.66e-53,171;UBERON:0006601,8.66e-53,171;UBERON:0000956,7.36e-48,25;UBERON:0000203,7.36e-48,25;UBERON:0003056,8.00e-48,61;UBERON:0002619,3.87e-40,22;UBERON:0010314,5.20e-36,132;UBERON:0001950,1.74e-35,20;UBERON:0011216,2.27e-31,223;UBERON:0007023,5.68e-30,114;UBERON:0003076,5.53e-22,15;UBERON:0003057,5.53e-22,15;UBERON:0000125,1.86e-21,9;UBERON:0002308,1.86e-21,9;UBERON:0002420,4.24e-21,9;UBERON:0007245,4.24e-21,9;UBERON:0010009,4.24e-21,9;UBERON:0010011,4.24e-21,9;UBERON:0000454,4.24e-21,9;UBERON:0000025,1.48e-18,192;UBERON:0004732,8.98e-18,13;UBERON:0009663,1.03e-16,7;UBERON:0004733,1.23e-15,12;UBERON:0002028,1.23e-15,12;UBERON:0007277,1.23e-15,12;UBERON:0002298,2.31e-15,6;UBERON:0002021,3.50e-13,5;UBERON:0000349,5.27e-13,5;UBERON:0001871,7.97e-13,6;UBERON:0004111,1.90e-12,240;UBERON:0000483,5.31e-11,306;UBERON:0000119,9.03e-11,309;UBERON:0000200,1.64e-10,6;UBERON:0000369,5.44e-10,4;UBERON:0002435,5.44e-10,4;UBERON:0000204,5.44e-10,4;UBERON:0010082,5.44e-10,4;UBERON:0002680,1.55e-09,9;UBERON:0001895,1.55e-09,9;UBERON:0010092,1.55e-09,9;UBERON:0001872,1.07e-08,5;UBERON:0000988,1.49e-08,3;UBERON:0001896,1.70e-08,3;UBERON:0005290,1.70e-08,3;UBERON:0010096,1.70e-08,3;UBERON:0002240,1.98e-08,3;UBERON:0005174,1.98e-08,3;UBERON:0001137,1.98e-08,3;UBERON:0005383,9.16e-08,3;UBERON:0005382,9.16e-08,3;UBERON:0000923,9.35e-08,560;UBERON:0010316,9.35e-08,560;UBERON:0005291,9.35e-08,560;UBERON:0006598,9.35e-08,560;UBERON:0010317,9.35e-08,560;UBERON:0002532,9.35e-08,560;UBERON:0002050,1.39e-07,564;UBERON:0000922,1.88e-07,592;UBERON:0005423,2.17e-07,581 | |||
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|short_description=p1@POU3F2 | |short_description=p1@POU3F2 | ||
}} | }} |
Latest revision as of 05:57, 20 September 2015
Short description: | p1@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POU3F2_5end |
Coexpression cluster: | C2872_neuroepithelioma_neuroblastoma_Astrocyte_Neurons_carcinoid_astrocytoma_Neural |
Association with transcript: | -78bp_to_ENST00000328345, NM_005604, uc003ppe.2_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | P20265B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.32e-12 | 25 |
oligodendrocyte | 6.94e-10 | 7 |
macroglial cell | 6.94e-10 | 7 |
astrocyte | 6.94e-10 | 7 |
oligodendrocyte precursor cell | 6.94e-10 | 7 |
astrocyte of the cerebral cortex | 1.53e-09 | 3 |
neuronal stem cell | 4.62e-09 | 8 |