FFCP PHASE1:Hg19::chr22:41682172..41682230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5905 | |EntrezGene=5905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9854 | |HGNC=9854 | ||
|TSSclassifier=strong | |||
|UniProt=P46060 | |UniProt=P46060 | ||
|association_with_transcript=0bp_to_NM_002883,uc003azu.2_5end | |association_with_transcript=0bp_to_NM_002883,uc003azu.2_5end | ||
|cluster_id=chr22:41682172..41682230,- | |||
|description=CAGE_peak_1_at_RANGAP1_5end | |description=CAGE_peak_1_at_RANGAP1_5end | ||
|id=chr22:41682172..41682230,- | |id=chr22:41682172..41682230,- | ||
|ontology_enrichment_celltype=CL:0002321!3.17e-15!248;CL:0000220!6.07e-15!246;CL:0000066!1.75e-13!254;CL:0000222!5.21e-12!119;CL:0000076!5.74e-11!62;CL:0000213!1.14e-08!57;CL:0000215!1.14e-08!57;CL:1000449!3.94e-08!16;CL:0000115!3.98e-08!35;CL:0002078!2.32e-07!44;CL:0000071!2.47e-07!18;CL:0002546!2.47e-07!18;CL:0002139!2.72e-07!24;CL:0000055!3.26e-07!180;CL:0002681!4.81e-07!13;CL:0002584!4.81e-07!13 | |ontology_enrichment_celltype=CL:0002321!3.17e-15!248;CL:0000220!6.07e-15!246;CL:0000066!1.75e-13!254;CL:0000222!5.21e-12!119;CL:0000076!5.74e-11!62;CL:0000213!1.14e-08!57;CL:0000215!1.14e-08!57;CL:1000449!3.94e-08!16;CL:0000115!3.98e-08!35;CL:0002078!2.32e-07!44;CL:0000071!2.47e-07!18;CL:0002546!2.47e-07!18;CL:0002139!2.72e-07!24;CL:0000055!3.26e-07!180;CL:0002681!4.81e-07!13;CL:0002584!4.81e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.96e-09;15!CL:0002681;2.08e-08;12!CL:0002584;2.08e-08;12!CL:0000115;2.16e-07;36!CL:0000071;2.52e-07;18!CL:0002139;2.78e-07;24!CL:1000497;3.44e-07;17!CL:0002518;3.44e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.14e-15,250;CL:0000066,7.87e-14,253;CL:0000222,6.02e-12,121;CL:0000076,8.35e-11,63;CL:1000449,1.95e-09,15;CL:0000213,4.15e-09,58;CL:0000215,4.15e-09,58;CL:0000115,1.29e-08,36;CL:0002681,2.10e-08,12;CL:0002584,2.10e-08,12;CL:0002078,8.37e-08,45;CL:0000071,2.47e-07,18;CL:0002546,2.47e-07,18;CL:0002139,2.72e-07,24;CL:1000497,3.51e-07,17;CL:0002518,3.51e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;2.52e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.10e-22!312;UBERON:0000483!6.79e-22!309;UBERON:0000475!8.79e-16!365;UBERON:0004111!1.25e-15!241;UBERON:0000477!7.44e-15!286;UBERON:0000025!1.99e-14!194;UBERON:0000064!8.00e-11!219;UBERON:0000033!9.52e-10!123;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0003056!1.89e-09!61;UBERON:0000481!2.17e-09!347;UBERON:0002020!2.79e-09!34;UBERON:0003528!2.79e-09!34;UBERON:0001893!3.52e-09!34;UBERON:0000055!5.97e-09!69;UBERON:0002791!7.64e-09!33;UBERON:0001981!1.03e-08!60;UBERON:0007500!1.03e-08!60;UBERON:0004537!1.03e-08!60;UBERON:0006965!1.03e-08!60;UBERON:0004121!1.26e-08!169;UBERON:0001869!1.32e-08!32;UBERON:0001637!2.32e-08!42;UBERON:0003509!2.32e-08!42;UBERON:0004572!2.32e-08!42;UBERON:0002780!2.50e-08!41;UBERON:0001890!2.50e-08!41;UBERON:0006240!2.50e-08!41;UBERON:0003914!2.55e-08!118;UBERON:0002049!2.79e-08!79;UBERON:0007798!2.79e-08!79;UBERON:0003080!3.04e-08!42;UBERON:0004211!3.94e-08!16;UBERON:0001285!3.94e-08!16;UBERON:0007684!3.94e-08!16;UBERON:0003220!3.94e-08!16;UBERON:0004208!3.94e-08!16;UBERON:0003075!5.27e-08!86;UBERON:0007284!5.27e-08!86;UBERON:0000924!5.91e-08!173;UBERON:0006601!5.91e-08!173;UBERON:0001049!6.12e-08!57;UBERON:0005068!6.12e-08!57;UBERON:0006241!6.12e-08!57;UBERON:0007135!6.12e-08!57;UBERON:0005256!2.34e-07!143;UBERON:0001986!2.47e-07!18;UBERON:0004638!2.47e-07!18;UBERON:0004852!2.47e-07!18;UBERON:0000955!3.05e-07!69;UBERON:0006238!3.05e-07!69;UBERON:0006555!3.69e-07!17;UBERON:0005103!3.69e-07!17;UBERON:0000083!3.69e-07!17;UBERON:0009201!3.69e-07!17;UBERON:0004819!3.69e-07!17;UBERON:0006553!3.69e-07!17;UBERON:0003074!3.69e-07!17;UBERON:0003060!3.69e-07!17;UBERON:0002346!4.50e-07!90;UBERON:0001225!4.81e-07!13;UBERON:0008987!4.81e-07!13;UBERON:0000487!4.99e-07!22;UBERON:0000490!5.30e-07!138;UBERON:0000956!6.47e-07!25;UBERON:0000203!6.47e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.96e-09;15!UBERON:0004819;1.96e-09;15!UBERON:0001285;1.96e-09;15!UBERON:0007684;1.96e-09;15!UBERON:0001225;2.08e-08;12!UBERON:0008987;2.08e-08;12!UBERON:0001893;3.50e-08;34!UBERON:0003914;4.94e-08;74!UBERON:0003528;5.13e-08;34!UBERON:0002020;5.13e-08;34!UBERON:0002791;7.51e-08;32!UBERON:0001869;8.38e-08;32!UBERON:0004638;2.52e-07;18!UBERON:0001986;2.52e-07;18!UBERON:0004852;2.52e-07;18!UBERON:0000353;2.60e-07;15!UBERON:0000487;4.85e-07;22!UBERON:0000490;5.68e-07;33!UBERON:0000956;6.99e-07;25!UBERON:0000203;6.99e-07;25!UBERON:0001637;7.83e-07;42!UBERON:0003509;7.83e-07;42!UBERON:0004572;7.83e-07;42 | |||
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|short_description=p1@RANGAP1 | |short_description=p1@RANGAP1 | ||
}} | }} |
Latest revision as of 21:20, 24 September 2015
Short description: | p1@RANGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RANGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002883, uc003azu.2_5end |
EntrezGene: | RANGAP1 |
HGNC: | 9854 |
UniProt: | P46060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.14e-15 | 250 |
epithelial cell | 7.87e-14 | 253 |
mesodermal cell | 6.02e-12 | 121 |
squamous epithelial cell | 8.35e-11 | 63 |
epithelial cell of nephron | 1.95e-09 | 15 |
lining cell | 4.15e-09 | 58 |
barrier cell | 4.15e-09 | 58 |
endothelial cell | 1.29e-08 | 36 |
kidney cortical cell | 2.10e-08 | 12 |
renal cortical epithelial cell | 2.10e-08 | 12 |
meso-epithelial cell | 8.37e-08 | 45 |
blood vessel endothelial cell | 2.47e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.47e-07 | 18 |
endothelial cell of vascular tree | 2.72e-07 | 24 |
kidney cell | 3.51e-07 | 17 |
kidney epithelial cell | 3.51e-07 | 17 |