FFCP PHASE1:Mm9::chr6:8898951..8898963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18231 | |EntrezGene=18231 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q61200 | |UniProt=Q61200 | ||
|association_with_transcript=337bp_to_ENSMUST00000160300,uc009aya.1,uc009ayb.1_5end | |association_with_transcript=337bp_to_ENSMUST00000160300,uc009aya.1,uc009ayb.1_5end | ||
|cluster_id=chr6:8898951..8898963,+ | |||
|description=CAGE_peak_11_at_Nxph1_5end | |description=CAGE_peak_11_at_Nxph1_5end | ||
|id=chr6:8898951..8898963,+ | |id=chr6:8898951..8898963,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.53e-18!23;CL:0000337!1.53e-18!23;CL:0000540!1.38e-10!33;CL:0000047!1.38e-10!33;CL:0000031!1.38e-10!33;CL:0000404!1.38e-10!33;CL:0002319!1.14e-08!43;CL:0000221!2.66e-08!44;CL:0000133!2.66e-08!44;CL:0000393!6.98e-08!39;CL:0000211!6.98e-08!39 | |ontology_enrichment_celltype=CL:0000117!1.53e-18!23;CL:0000337!1.53e-18!23;CL:0000540!1.38e-10!33;CL:0000047!1.38e-10!33;CL:0000031!1.38e-10!33;CL:0000404!1.38e-10!33;CL:0002319!1.14e-08!43;CL:0000221!2.66e-08!44;CL:0000133!2.66e-08!44;CL:0000393!6.98e-08!39;CL:0000211!6.98e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-29,23;CL:0000337,1.55e-29,23;CL:0000540,1.52e-19,33;CL:0000047,1.52e-19,33;CL:0000031,1.52e-19,33;CL:0000404,1.52e-19,33;CL:0000393,5.22e-16,39;CL:0000211,5.22e-16,39;CL:0002319,3.35e-14,43;CL:0000221,8.43e-14,44;CL:0000133,8.43e-14,44;CL:0002614,5.39e-10,3;CL:0002608,1.94e-09,3;CL:0002612,9.25e-09,3;CL:0002321,1.98e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.68e-24!34;UBERON:0001049!2.50e-23!52;UBERON:0005068!2.50e-23!52;UBERON:0006241!2.50e-23!52;UBERON:0007135!2.50e-23!52;UBERON:0000073!5.84e-22!75;UBERON:0001016!5.84e-22!75;UBERON:0001017!3.40e-21!73;UBERON:0005743!3.40e-21!73;UBERON:0002346!4.70e-21!71;UBERON:0003075!4.70e-21!71;UBERON:0007284!4.70e-21!71;UBERON:0000955!5.33e-20!50;UBERON:0006238!5.33e-20!50;UBERON:0004121!9.51e-20!102;UBERON:0000924!9.51e-20!102;UBERON:0006601!9.51e-20!102;UBERON:0002791!2.36e-19!29;UBERON:0003528!2.36e-19!29;UBERON:0001893!2.36e-19!29;UBERON:0002616!5.03e-19!49;UBERON:0003080!5.33e-17!40;UBERON:0000033!5.84e-17!63;UBERON:0002780!4.21e-16!39;UBERON:0001890!4.21e-16!39;UBERON:0006240!4.21e-16!39;UBERON:0003056!6.70e-16!49;UBERON:0000956!3.95e-12!21;UBERON:0001869!3.95e-12!21;UBERON:0000203!3.95e-12!21;UBERON:0002619!6.38e-11!17;UBERON:0007811!7.95e-11!86;UBERON:0000153!8.09e-09!94;UBERON:0002420!1.00e-08!8;UBERON:0007245!1.00e-08!8;UBERON:0010009!1.00e-08!8;UBERON:0010011!1.00e-08!8;UBERON:0000454!1.00e-08!8;UBERON:0002021!2.11e-08!10;UBERON:0000411!2.11e-08!10;UBERON:0001950!2.11e-08!10;UBERON:0002298!6.26e-08!6;UBERON:0002240!3.56e-07!6;UBERON:0005174!3.56e-07!6;UBERON:0001137!3.56e-07!6;UBERON:0003076!5.53e-07!12;UBERON:0003057!5.53e-07!12 | |ontology_enrichment_uberon=UBERON:0002020!3.68e-24!34;UBERON:0001049!2.50e-23!52;UBERON:0005068!2.50e-23!52;UBERON:0006241!2.50e-23!52;UBERON:0007135!2.50e-23!52;UBERON:0000073!5.84e-22!75;UBERON:0001016!5.84e-22!75;UBERON:0001017!3.40e-21!73;UBERON:0005743!3.40e-21!73;UBERON:0002346!4.70e-21!71;UBERON:0003075!4.70e-21!71;UBERON:0007284!4.70e-21!71;UBERON:0000955!5.33e-20!50;UBERON:0006238!5.33e-20!50;UBERON:0004121!9.51e-20!102;UBERON:0000924!9.51e-20!102;UBERON:0006601!9.51e-20!102;UBERON:0002791!2.36e-19!29;UBERON:0003528!2.36e-19!29;UBERON:0001893!2.36e-19!29;UBERON:0002616!5.03e-19!49;UBERON:0003080!5.33e-17!40;UBERON:0000033!5.84e-17!63;UBERON:0002780!4.21e-16!39;UBERON:0001890!4.21e-16!39;UBERON:0006240!4.21e-16!39;UBERON:0003056!6.70e-16!49;UBERON:0000956!3.95e-12!21;UBERON:0001869!3.95e-12!21;UBERON:0000203!3.95e-12!21;UBERON:0002619!6.38e-11!17;UBERON:0007811!7.95e-11!86;UBERON:0000153!8.09e-09!94;UBERON:0002420!1.00e-08!8;UBERON:0007245!1.00e-08!8;UBERON:0010009!1.00e-08!8;UBERON:0010011!1.00e-08!8;UBERON:0000454!1.00e-08!8;UBERON:0002021!2.11e-08!10;UBERON:0000411!2.11e-08!10;UBERON:0001950!2.11e-08!10;UBERON:0002298!6.26e-08!6;UBERON:0002240!3.56e-07!6;UBERON:0005174!3.56e-07!6;UBERON:0001137!3.56e-07!6;UBERON:0003076!5.53e-07!12;UBERON:0003057!5.53e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-31,54;UBERON:0001017,3.33e-31,73;UBERON:0001049,2.31e-30,52;UBERON:0005068,2.31e-30,52;UBERON:0006241,2.31e-30,52;UBERON:0007135,2.31e-30,52;UBERON:0001016,3.14e-30,75;UBERON:0002020,5.92e-27,34;UBERON:0002346,9.91e-24,64;UBERON:0003075,9.91e-24,64;UBERON:0007284,9.91e-24,64;UBERON:0000955,2.69e-23,47;UBERON:0006238,2.69e-23,47;UBERON:0004121,9.92e-23,95;UBERON:0000924,9.92e-23,95;UBERON:0006601,9.92e-23,95;UBERON:0002616,2.34e-21,46;UBERON:0010371,3.49e-20,73;UBERON:0003528,1.22e-19,29;UBERON:0002791,1.22e-19,29;UBERON:0001893,1.22e-19,29;UBERON:0003080,1.75e-17,40;UBERON:0002780,8.54e-16,39;UBERON:0001890,8.54e-16,39;UBERON:0006240,8.54e-16,39;UBERON:0002619,2.73e-15,17;UBERON:0010314,5.75e-15,92;UBERON:0003076,1.36e-14,12;UBERON:0003057,1.36e-14,12;UBERON:0003056,1.32e-13,49;UBERON:0002950,1.67e-12,4;UBERON:0001891,1.67e-12,4;UBERON:0009616,1.67e-12,4;UBERON:0010286,1.67e-12,4;UBERON:0000956,4.98e-12,21;UBERON:0001869,4.98e-12,21;UBERON:0000203,4.98e-12,21;UBERON:0002240,6.05e-12,6;UBERON:0005174,6.05e-12,6;UBERON:0001137,6.05e-12,6;UBERON:0000025,4.31e-11,114;UBERON:0004111,5.00e-10,122;UBERON:0002038,5.39e-10,3;UBERON:0009663,5.39e-10,3;UBERON:0009661,5.39e-10,3;UBERON:0000125,5.39e-10,3;UBERON:0002308,5.39e-10,3;UBERON:0002021,5.91e-10,10;UBERON:0000411,5.91e-10,10;UBERON:0001950,5.91e-10,10;UBERON:0001948,2.90e-09,5;UBERON:0002315,2.90e-09,5;UBERON:0002420,3.35e-09,8;UBERON:0007245,3.35e-09,8;UBERON:0010009,3.35e-09,8;UBERON:0010011,3.35e-09,8;UBERON:0000454,3.35e-09,8;UBERON:0002257,9.25e-09,3;UBERON:0011216,2.91e-08,194;UBERON:0001896,1.51e-07,2;UBERON:0002298,1.51e-07,2;UBERON:0005290,1.51e-07,2;UBERON:0010096,1.51e-07,2;UBERON:0001954,9.00e-07,7;UBERON:0003022,9.00e-07,7;UBERON:0002421,9.00e-07,7;UBERON:0000349,9.00e-07,7;UBERON:0002600,9.00e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0,0.518448061542388,0.270011876663381,0,0.856952953211411,1.98781686856452,1.22490799214954,1.53352753629178,2.75765635983006,0,2.29837208553338,1.22885226604995,0.527545150920775,1.9212405156506,1.04182674111352,1.3959149950069,3.93933827022176,2.13917546887534,1.17851434189467,1.70846016958924,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0.879580464790051,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.16471553798949,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,2.03967832211561,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,0.859265911718438,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0,0.518448061542388,0.270011876663381,0,0.856952953211411,1.98781686856452,1.22490799214954,1.53352753629178,2.75765635983006,0,2.29837208553338,1.22885226604995,0.527545150920775,1.9212405156506,1.04182674111352,1.3959149950069,3.93933827022176,2.13917546887534,1.17851434189467,1.70846016958924,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,1.49790639404823,0.457500602818626,0.879580464790051,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.16471553798949,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,2.03967832211561,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,0.859265911718438,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.760437899670719,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p11@Nxph1 | |short_description=p11@Nxph1 | ||
}} | }} |
Latest revision as of 21:33, 1 October 2015
Short description: | p11@Nxph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Nxph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 337bp_to_ENSMUST00000160300, uc009aya.1, uc009ayb.1_5end |
EntrezGene: | Nxph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.55e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-29 | 23 |
neuron | 1.52e-19 | 33 |
neuronal stem cell | 1.52e-19 | 33 |
neuroblast | 1.52e-19 | 33 |
electrically signaling cell | 1.52e-19 | 33 |
electrically responsive cell | 5.22e-16 | 39 |
electrically active cell | 5.22e-16 | 39 |
neural cell | 3.35e-14 | 43 |
ectodermal cell | 8.43e-14 | 44 |
neurectodermal cell | 8.43e-14 | 44 |
neuron of the substantia nigra | 5.39e-10 | 3 |
hippocampal neuron | 1.94e-09 | 3 |
neuron of the ventral spinal cord | 9.25e-09 | 3 |
embryonic cell | 1.98e-07 | 70 |