FFCP PHASE1:Hg19::chr11:62688765..62688781,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62688765..62688781,-
|short_description=p3@CHRM1
|description=CAGE_peak_3_at_CHRM1_5end
|association_with_transcript=230bp_to_NM_000738,uc001nwi.2_5end
|...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1128 | |EntrezGene=1128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1950 | |HGNC=1950 | ||
|UniProt=P11229, | |TSSclassifier=strong | ||
|UniProt=P11229,Q53XZ3 | |||
|association_with_transcript=230bp_to_NM_000738,uc001nwi.2_5end | |||
|cluster_id=chr11:62688765..62688781,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CHRM1_5end | |||
|id=chr11:62688765..62688781,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.31e-17;82!UBERON:0010122;1.07e-12;2!UBERON:0006298;8.67e-07;1!UBERON:0006222;8.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!5.13e-87!34;UBERON:0001869!1.12e-86!32;UBERON:0002791!1.81e-83!33;UBERON:0002780!2.36e-81!41;UBERON:0001890!2.36e-81!41;UBERON:0006240!2.36e-81!41;UBERON:0003080!2.89e-79!42;UBERON:0002020!2.45e-75!34;UBERON:0003528!2.45e-75!34;UBERON:0002619!3.32e-72!22;UBERON:0001950!2.68e-65!20;UBERON:0000956!3.49e-63!25;UBERON:0000203!3.49e-63!25;UBERON:0001017!9.89e-57!82;UBERON:0005743!1.06e-56!86;UBERON:0001049!1.38e-56!57;UBERON:0005068!1.38e-56!57;UBERON:0006241!1.38e-56!57;UBERON:0007135!1.38e-56!57;UBERON:0003056!7.29e-56!61;UBERON:0000955!9.20e-55!69;UBERON:0006238!9.20e-55!69;UBERON:0002616!2.02e-54!59;UBERON:0000073!3.18e-53!94;UBERON:0001016!3.18e-53!94;UBERON:0007023!1.04e-45!115;UBERON:0003075!1.40e-42!86;UBERON:0007284!1.40e-42!86;UBERON:0002346!2.59e-40!90;UBERON:0000033!3.42e-39!123;UBERON:0000153!5.23e-39!129;UBERON:0007811!5.23e-39!129;UBERON:0004121!3.53e-32!169;UBERON:0000924!3.30e-31!173;UBERON:0006601!3.30e-31!173;UBERON:0002420!1.05e-24!9;UBERON:0007245!1.05e-24!9;UBERON:0010009!1.05e-24!9;UBERON:0010011!1.05e-24!9;UBERON:0000454!1.05e-24!9;UBERON:0000200!8.05e-22!6;UBERON:0001871!1.10e-21!7;UBERON:0000349!1.15e-18!5;UBERON:0002021!2.27e-18!5;UBERON:0001872!2.53e-18!5;UBERON:0009663!3.39e-18!7;UBERON:0000369!1.88e-15!4;UBERON:0002435!1.88e-15!4;UBERON:0000204!1.88e-15!4;UBERON:0010082!1.88e-15!4;UBERON:0002308!5.32e-14!9;UBERON:0000125!5.32e-14!9;UBERON:0005383!6.72e-12!3;UBERON:0005382!6.72e-12!3;UBERON:0002771!1.43e-11!3;UBERON:0004111!1.99e-11!241;UBERON:0000025!3.91e-11!194;UBERON:0000064!1.03e-09!219;UBERON:0000475!1.64e-09!365;UBERON:0000477!5.05e-09!286;UBERON:0001873!1.61e-08!2;UBERON:0010122!1.61e-08!2;UBERON:0001954!1.80e-08!2;UBERON:0003022!1.80e-08!2;UBERON:0002421!1.80e-08!2;UBERON:0002600!1.80e-08!2;UBERON:0001870!2.24e-08!2;UBERON:0001876!2.40e-08!2;UBERON:0002360!4.93e-08!2;UBERON:0000094!4.93e-08!2;UBERON:0007645!4.93e-08!2;UBERON:0001875!1.26e-07!2;UBERON:0006514!1.26e-07!2;UBERON:0000481!5.71e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.25e-96;22!UBERON:0001869;4.91e-92;32!UBERON:0001893;4.88e-87;34!UBERON:0002791;6.05e-87;32!UBERON:0001950;5.81e-85;20!UBERON:0000956;2.53e-84;25!UBERON:0000203;2.53e-84;25!UBERON:0003528;4.38e-78;34!UBERON:0002020;4.38e-78;34!UBERON:0002780;2.48e-62;41!UBERON:0001890;2.48e-62;41!UBERON:0000073;1.50e-37;53!UBERON:0002616;1.50e-37;53!UBERON:0000200;7.06e-34;6!UBERON:0000955;7.59e-33;68!UBERON:0001017;1.60e-29;75!UBERON:0000349;6.96e-29;5!UBERON:0001871;9.16e-29;6!UBERON:0000369;8.52e-24;4!UBERON:0002435;8.52e-24;4!UBERON:0000204;8.52e-24;4!UBERON:0002420;9.85e-23;9!UBERON:0007245;9.85e-23;9!UBERON:0010009;9.85e-23;9!UBERON:0010011;9.85e-23;9!UBERON:0000454;9.85e-23;9!UBERON:0002021;5.09e-19;5!UBERON:0001016;5.29e-19;83!UBERON:0001872;6.41e-19;5!UBERON:0005383;4.48e-18;3!UBERON:0005382;4.48e-18;3!UBERON:0001870;1.01e-17;3!UBERON:0009663;1.12e-13;7!UBERON:0007023;1.01e-12;114!UBERON:0001873;1.07e-12;2!UBERON:0001954;1.28e-12;2!UBERON:0003022;1.28e-12;2!UBERON:0002421;1.28e-12;2!UBERON:0002600;1.28e-12;2!UBERON:0001876;2.57e-12;2!UBERON:0002771;3.23e-12;2!UBERON:0002702;4.30e-12;2!UBERON:0011216;2.16e-11;132!UBERON:0000125;1.15e-10;9!UBERON:0002308;1.15e-10;9!UBERON:0002902;1.46e-07;1!UBERON:0009899;1.46e-07;1!UBERON:0002581;1.86e-07;1!UBERON:0001882;1.86e-07;1!UBERON:0002022;1.86e-07;1!UBERON:0005403;1.86e-07;1!UBERON:0007190;2.37e-07;1!UBERON:0001874;4.31e-07;1!UBERON:0003112;5.78e-07;1!UBERON:0011158;5.78e-07;1!UBERON:0003128;5.78e-07;1!UBERON:0001703;5.78e-07;1!UBERON:0002241;5.78e-07;1!UBERON:0010314;6.50e-07;132!UBERON:0001736;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.69e-104,32;UBERON:0001893,3.05e-98,34;UBERON:0002619,5.93e-96,22;UBERON:0002791,6.51e-96,32;UBERON:0003528,3.73e-90,34;UBERON:0002020,3.73e-90,34;UBERON:0002780,1.06e-87,41;UBERON:0001890,1.06e-87,41;UBERON:0003080,1.06e-87,41;UBERON:0006240,1.06e-87,41;UBERON:0001950,4.77e-85,20;UBERON:0000956,2.12e-84,25;UBERON:0000203,2.12e-84,25;UBERON:0000073,4.60e-67,53;UBERON:0002616,4.60e-67,53;UBERON:0000955,4.72e-64,68;UBERON:0006238,4.72e-64,68;UBERON:0001049,2.92e-63,56;UBERON:0005068,2.92e-63,56;UBERON:0006241,2.92e-63,56;UBERON:0007135,2.92e-63,56;UBERON:0003056,9.71e-58,61;UBERON:0001017,3.16e-57,81;UBERON:0001016,4.47e-51,89;UBERON:0003075,8.36e-42,82;UBERON:0007284,8.36e-42,82;UBERON:0002346,1.22e-39,86;UBERON:0007023,2.68e-37,114;UBERON:0000200,5.00e-34,6;UBERON:0010371,6.15e-32,104;UBERON:0000349,5.85e-29,5;UBERON:0001871,7.54e-29,6;UBERON:0004121,2.99e-28,171;UBERON:0000924,2.99e-28,171;UBERON:0006601,2.99e-28,171;UBERON:0010314,3.07e-26,132;UBERON:0000369,8.52e-24,4;UBERON:0002435,8.52e-24,4;UBERON:0000204,8.52e-24,4;UBERON:0010082,8.52e-24,4;UBERON:0011216,1.77e-23,223;UBERON:0002420,8.46e-23,9;UBERON:0007245,8.46e-23,9;UBERON:0010009,8.46e-23,9;UBERON:0010011,8.46e-23,9;UBERON:0000454,8.46e-23,9;UBERON:0002021,5.09e-19,5;UBERON:0001872,7.04e-19,5;UBERON:0005383,4.23e-18,3;UBERON:0005382,4.23e-18,3;UBERON:0001870,8.98e-18,3;UBERON:0000025,6.13e-15,192;UBERON:0009663,1.12e-13,7;UBERON:0004111,3.36e-13,240;UBERON:0001873,1.07e-12,2;UBERON:0010122,1.07e-12,2;UBERON:0001954,1.28e-12,2;UBERON:0003022,1.28e-12,2;UBERON:0002421,1.28e-12,2;UBERON:0002600,1.28e-12,2;UBERON:0001876,2.04e-12,2;UBERON:0002771,2.88e-12,2;UBERON:0002702,3.62e-12,2;UBERON:0000125,1.15e-10,9;UBERON:0002308,1.15e-10,9;UBERON:0002902,1.46e-07,1;UBERON:0009899,1.46e-07,1;UBERON:0002581,1.75e-07,1;UBERON:0002022,1.86e-07,1;UBERON:0001882,1.98e-07,1;UBERON:0005403,1.98e-07,1;UBERON:0000483,2.08e-07,306;UBERON:0007190,2.37e-07,1;UBERON:0000119,2.76e-07,309;UBERON:0001874,4.06e-07,1;UBERON:0003112,6.12e-07,1;UBERON:0011158,6.12e-07,1;UBERON:0003128,6.12e-07,1;UBERON:0001703,6.12e-07,1;UBERON:0002241,6.12e-07,1;UBERON:0004761,6.12e-07,1;UBERON:0009617,6.12e-07,1;UBERON:0001736,7.29e-07,1;UBERON:0006298,7.29e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,4.64209074154692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69332746095218,5.56608588971108,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,7.47697919477529,0,0,0,5.26524953169534,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,1.40558667435203,0,0,0,0,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01452561580848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,3.40508515278939,0,0,0,0,0,8.56568748878148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.83039397352945,2.8793914062495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,8.54248693782912,2.8339315265117,2.39450788585727,6.97395638418567,0.504143392443436,11.6184184139886,2.42213468447777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88883363107625,0.781078098613847,4.54710952302605,5.96108615822724,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,8.74777888385893,0,0,0.863424021355654,3.61365856806804,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,3.01159151174194,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,10.7426554501645,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930896962757057,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,4.64209074154692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69332746095218,5.56608588971108,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,7.47697919477529,0,0,0,5.26524953169534,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,1.40558667435203,0,0,0,0,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01452561580848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,3.40508515278939,0,0,0,0,0,8.56568748878148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.83039397352945,2.8793914062495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,8.54248693782912,2.8339315265117,2.39450788585727,6.97395638418567,0.504143392443436,11.6184184139886,2.42213468447777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88883363107625,0.781078098613847,4.54710952302605,5.96108615822724,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,8.74777888385893,0,0,0.863424021355654,3.61365856806804,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,3.01159151174194,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,10.7426554501645,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930896962757057,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@CHRM1 | |||
}} | }} |
Latest revision as of 22:20, 18 September 2015
Short description: | p3@CHRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRM1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 230bp_to_NM_000738, uc001nwi.2_5end |
EntrezGene: | CHRM1 |
HGNC: | 1950 |
UniProt: | P11229Q53XZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data