FFCP PHASE1:Hg19::chr21:41239376..41239379,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5121 | |EntrezGene=5121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8742 | |HGNC=8742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468717_5end | |association_with_transcript=0bp_to_ENST00000468717_5end | ||
|cluster_id=chr21:41239376..41239379,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_2_at_PCP4_5end | |description=CAGE_peak_2_at_PCP4_5end | ||
|id=chr21:41239376..41239379,+ | |id=chr21:41239376..41239379,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-14;82!UBERON:0006215;6.20e-08;3!UBERON:0006241;2.06e-07;3!UBERON:0003057;2.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.75e-65!57;UBERON:0005068!1.75e-65!57;UBERON:0006241!1.75e-65!57;UBERON:0007135!1.75e-65!57;UBERON:0007023!2.05e-65!115;UBERON:0005743!4.88e-63!86;UBERON:0001017!1.49e-57!82;UBERON:0000073!2.36e-57!94;UBERON:0001016!2.36e-57!94;UBERON:0002616!3.95e-57!59;UBERON:0000955!2.13e-56!69;UBERON:0006238!2.13e-56!69;UBERON:0002346!5.25e-56!90;UBERON:0003075!2.69e-55!86;UBERON:0007284!2.69e-55!86;UBERON:0002780!3.81e-53!41;UBERON:0001890!3.81e-53!41;UBERON:0006240!3.81e-53!41;UBERON:0003080!1.34e-51!42;UBERON:0001893!9.82e-49!34;UBERON:0002020!2.07e-48!34;UBERON:0003528!2.07e-48!34;UBERON:0002791!4.67e-47!33;UBERON:0003056!5.89e-46!61;UBERON:0001869!7.83e-46!32;UBERON:0000153!1.45e-36!129;UBERON:0007811!1.45e-36!129;UBERON:0000033!2.15e-36!123;UBERON:0002619!8.60e-36!22;UBERON:0000956!1.75e-33!25;UBERON:0000203!1.75e-33!25;UBERON:0001950!6.98e-33!20;UBERON:0000924!2.05e-32!173;UBERON:0006601!2.05e-32!173;UBERON:0004121!2.54e-31!169;UBERON:0002420!1.68e-16!9;UBERON:0007245!1.68e-16!9;UBERON:0010009!1.68e-16!9;UBERON:0010011!1.68e-16!9;UBERON:0000454!1.68e-16!9;UBERON:0002308!2.52e-16!9;UBERON:0000125!2.52e-16!9;UBERON:0003076!1.56e-14!15;UBERON:0003057!1.56e-14!15;UBERON:0009663!1.61e-13!7;UBERON:0000025!2.72e-13!194;UBERON:0001871!5.30e-13!7;UBERON:0000064!1.18e-12!219;UBERON:0000475!1.73e-12!365;UBERON:0004111!5.63e-12!241;UBERON:0000062!1.56e-11!511;UBERON:0000483!3.39e-11!309;UBERON:0000200!5.66e-11!6;UBERON:0000119!6.58e-11!312;UBERON:0000477!1.12e-10!286;UBERON:0004733!1.15e-10!12;UBERON:0002028!1.15e-10!12;UBERON:0007277!1.15e-10!12;UBERON:0002298!5.13e-10!8;UBERON:0004732!1.11e-09!13;UBERON:0000481!2.06e-09!347;UBERON:0000349!2.85e-09!5;UBERON:0002021!3.38e-09!5;UBERON:0001872!3.56e-09!5;UBERON:0000922!5.60e-09!612;UBERON:0000369!7.89e-09!4;UBERON:0002435!7.89e-09!4;UBERON:0000204!7.89e-09!4;UBERON:0010082!7.89e-09!4;UBERON:0000468!3.89e-08!659;UBERON:0000966!4.94e-08!5;UBERON:0005388!4.94e-08!5;UBERON:0001802!4.94e-08!5;UBERON:0004907!1.36e-07!5;UBERON:0002050!1.76e-07!605;UBERON:0005423!1.76e-07!605;UBERON:0000923!4.59e-07!604;UBERON:0005291!4.59e-07!604;UBERON:0006598!4.59e-07!604;UBERON:0002532!4.59e-07!604;UBERON:0005383!4.73e-07!3;UBERON:0005382!4.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.63e-54;34!UBERON:0001869;3.27e-54;32!UBERON:0003528;5.23e-54;34!UBERON:0002020;5.23e-54;34!UBERON:0002791;6.68e-54;32!UBERON:0002619;9.89e-50;22!UBERON:0002780;3.00e-46;41!UBERON:0001890;3.00e-46;41!UBERON:0001950;1.23e-45;20!UBERON:0000956;3.35e-43;25!UBERON:0000203;3.35e-43;25!UBERON:0000073;4.66e-43;53!UBERON:0002616;4.66e-43;53!UBERON:0001017;5.65e-28;75!UBERON:0000955;5.97e-27;68!UBERON:0001016;2.97e-23;83!UBERON:0002420;1.85e-22;9!UBERON:0007245;1.85e-22;9!UBERON:0010009;1.85e-22;9!UBERON:0010011;1.85e-22;9!UBERON:0000454;1.85e-22;9!UBERON:0000125;2.97e-22;9!UBERON:0002308;2.97e-22;9!UBERON:0009663;2.78e-18;7!UBERON:0007023;1.15e-17;114!UBERON:0001871;1.76e-15;6!UBERON:0004733;9.92e-15;12!UBERON:0002028;9.92e-15;12!UBERON:0000200;1.06e-14;6!UBERON:0002298;5.08e-14;6!UBERON:0004732;1.87e-13;13!UBERON:0000349;2.40e-12;5!UBERON:0001872;2.74e-12;5!UBERON:0002021;2.91e-12;5!UBERON:0000369;9.94e-12;4!UBERON:0002435;9.94e-12;4!UBERON:0000204;9.94e-12;4!UBERON:0011216;1.29e-10;132!UBERON:0005383;3.00e-09;3!UBERON:0005382;3.00e-09;3!UBERON:0002680;6.13e-09;9!UBERON:0001895;6.13e-09;9!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0001870;2.96e-08;3!UBERON:0001896;3.51e-08;3!UBERON:0005290;3.51e-08;3!UBERON:0000988;1.62e-07;3!UBERON:0002240;2.06e-07;3!UBERON:0005174;2.06e-07;3!UBERON:0001137;2.06e-07;3!UBERON:0010314;2.95e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.77e-84,56;UBERON:0005068,3.77e-84,56;UBERON:0006241,3.77e-84,56;UBERON:0007135,3.77e-84,56;UBERON:0000073,4.11e-78,53;UBERON:0002616,4.11e-78,53;UBERON:0001893,2.80e-64,34;UBERON:0002780,4.63e-64,41;UBERON:0001890,4.63e-64,41;UBERON:0003080,4.63e-64,41;UBERON:0006240,4.63e-64,41;UBERON:0003528,7.75e-64,34;UBERON:0002020,7.75e-64,34;UBERON:0000955,5.25e-63,68;UBERON:0006238,5.25e-63,68;UBERON:0003075,1.62e-61,82;UBERON:0007284,1.62e-61,82;UBERON:0001017,1.72e-61,81;UBERON:0002346,1.79e-60,86;UBERON:0001869,3.24e-60,32;UBERON:0002791,1.04e-59,32;UBERON:0007023,1.34e-59,114;UBERON:0001016,1.94e-56,89;UBERON:0010371,2.32e-50,104;UBERON:0002619,1.51e-49,22;UBERON:0003056,6.40e-48,61;UBERON:0001950,1.85e-45,20;UBERON:0000956,4.84e-43,25;UBERON:0000203,4.84e-43,25;UBERON:0010314,3.32e-38,132;UBERON:0004121,3.19e-31,171;UBERON:0000924,3.19e-31,171;UBERON:0006601,3.19e-31,171;UBERON:0011216,1.70e-24,223;UBERON:0002420,1.81e-22,9;UBERON:0007245,1.81e-22,9;UBERON:0010009,1.81e-22,9;UBERON:0010011,1.81e-22,9;UBERON:0000454,1.81e-22,9;UBERON:0000125,3.21e-22,9;UBERON:0002308,3.21e-22,9;UBERON:0003076,3.41e-20,15;UBERON:0003057,3.41e-20,15;UBERON:0000025,1.15e-18,192;UBERON:0009663,2.75e-18,7;UBERON:0004111,6.53e-16,240;UBERON:0001871,1.98e-15,6;UBERON:0004733,9.52e-15,12;UBERON:0002028,9.52e-15,12;UBERON:0007277,9.52e-15,12;UBERON:0000200,1.00e-14,6;UBERON:0002298,6.28e-14,6;UBERON:0004732,1.80e-13,13;UBERON:0000483,5.69e-13,306;UBERON:0000119,1.05e-12,309;UBERON:0000349,2.40e-12,5;UBERON:0002021,3.05e-12,5;UBERON:0001872,3.28e-12,5;UBERON:0000369,9.95e-12,4;UBERON:0002435,9.95e-12,4;UBERON:0000204,9.95e-12,4;UBERON:0010082,9.95e-12,4;UBERON:0005383,3.01e-09,3;UBERON:0005382,3.01e-09,3;UBERON:0002680,5.32e-09,9;UBERON:0001895,5.32e-09,9;UBERON:0010092,5.32e-09,9;UBERON:0006947,1.24e-08,3;UBERON:0004054,1.24e-08,3;UBERON:0000922,3.08e-08,592;UBERON:0001870,3.19e-08,3;UBERON:0001896,4.17e-08,3;UBERON:0005290,4.17e-08,3;UBERON:0010096,4.17e-08,3;UBERON:0002050,7.84e-08,564;UBERON:0005423,1.33e-07,581;UBERON:0000988,1.69e-07,3;UBERON:0000923,1.76e-07,560;UBERON:0010316,1.76e-07,560;UBERON:0005291,1.76e-07,560;UBERON:0006598,1.76e-07,560;UBERON:0010317,1.76e-07,560;UBERON:0002532,1.76e-07,560;UBERON:0002240,2.34e-07,3;UBERON:0005174,2.34e-07,3;UBERON:0001137,2.34e-07,3 | |||
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| ||
|short_description=p2@PCP4 | |short_description=p2@PCP4 | ||
}} | }} |
Latest revision as of 11:48, 18 September 2015
Short description: | p2@PCP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCP4_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000468717_5end |
EntrezGene: | PCP4 |
HGNC: | 8742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data