FFCP PHASE1:Hg19::chr12:6233743..6233756,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6233743..6233756,-
|short_description=p3@VWF
|description=CAGE_peak_3_at_VWF_5end
|association_with_transcript=74bp_to_ENST00000540192_5end
|EntrezGene=7...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000540192_5end | |||
|cluster_id=chr12:6233743..6233756,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_3_at_VWF_5end | |||
|id=chr12:6233743..6233756,- | |||
|ontology_enrichment_celltype=CL:0002139!7.78e-30!24;CL:0000115!5.12e-29!35;CL:0000071!2.10e-22!18;CL:0002546!2.10e-22!18;CL:0002078!9.09e-22!44;CL:0000213!3.90e-14!57;CL:0000215!3.90e-14!57;CL:1000413!9.53e-12!9;CL:0005020!5.66e-09!6;CL:0002138!5.66e-09!6;CL:0005022!5.66e-09!6;CL:0002543!1.35e-08!6;CL:0002544!2.31e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-32;24!CL:0000115;1.54e-26;36!CL:0000071;1.67e-24;18!CL:0002078;8.35e-15;45!CL:1000413;9.10e-13;9!CL:0000213;4.28e-10;58!CL:0000215;4.28e-10;58!CL:0002138;9.95e-10;6!CL:0002543;2.65e-09;6!CL:0002544;4.80e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-32,24;CL:0000115,1.95e-31,36;CL:0000071,1.61e-24,18;CL:0002546,1.61e-24,18;CL:0002078,8.85e-23,45;CL:0000213,3.45e-15,58;CL:0000215,3.45e-15,58;CL:1000413,8.87e-13,9;CL:0005020,1.00e-09,6;CL:0002138,1.00e-09,6;CL:0005022,1.00e-09,6;CL:0002543,2.62e-09,6;CL:0002544,4.71e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.67e-24;18!UBERON:0006601;7.51e-10;82!CL:0005022;9.95e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.37e-72!115;UBERON:0004111!1.08e-28!241;UBERON:0001049!2.53e-28!57;UBERON:0005068!2.53e-28!57;UBERON:0006241!2.53e-28!57;UBERON:0007135!2.53e-28!57;UBERON:0000477!1.33e-25!286;UBERON:0000025!3.50e-24!194;UBERON:0002616!6.31e-23!59;UBERON:0003080!1.78e-22!42;UBERON:0001017!2.09e-22!82;UBERON:0001986!2.10e-22!18;UBERON:0004638!2.10e-22!18;UBERON:0004852!2.10e-22!18;UBERON:0003075!7.58e-22!86;UBERON:0007284!7.58e-22!86;UBERON:0005743!8.12e-22!86;UBERON:0002780!1.70e-21!41;UBERON:0001890!1.70e-21!41;UBERON:0006240!1.70e-21!41;UBERON:0000955!2.27e-21!69;UBERON:0006238!2.27e-21!69;UBERON:0002346!4.16e-20!90;UBERON:0000073!3.90e-19!94;UBERON:0001016!3.90e-19!94;UBERON:0001893!8.38e-19!34;UBERON:0002020!8.80e-19!34;UBERON:0003528!8.80e-19!34;UBERON:0000487!1.55e-18!22;UBERON:0002791!4.09e-18!33;UBERON:0001869!2.28e-17!32;UBERON:0006914!8.77e-17!25;UBERON:0002619!1.77e-15!22;UBERON:0003056!9.53e-15!61;UBERON:0000483!1.05e-14!309;UBERON:0001950!2.83e-14!20;UBERON:0000119!2.86e-14!312;UBERON:0000956!6.41e-13!25;UBERON:0000203!6.41e-13!25;UBERON:0000153!1.34e-12!129;UBERON:0007811!1.34e-12!129;UBERON:0003915!9.53e-12!9;UBERON:0004700!9.53e-12!9;UBERON:0001917!9.53e-12!9;UBERON:0000033!2.70e-11!123;UBERON:0000055!7.66e-11!69;UBERON:0000468!6.26e-10!659;UBERON:0004121!1.06e-09!169;UBERON:0000467!1.36e-09!625;UBERON:0000480!1.66e-09!626;UBERON:0002465!2.47e-09!10;UBERON:0000064!3.45e-09!219;UBERON:0000924!4.28e-09!173;UBERON:0006601!4.28e-09!173;UBERON:0002049!1.03e-08!79;UBERON:0007798!1.03e-08!79;UBERON:0001473!7.02e-08!8;UBERON:0004536!7.02e-08!8;UBERON:0006558!7.02e-08!8;UBERON:0002298!1.14e-07!8;UBERON:0002308!1.74e-07!9;UBERON:0000125!1.74e-07!9;UBERON:0001009!2.73e-07!113;UBERON:0004872!2.78e-07!84;UBERON:0002420!3.07e-07!9;UBERON:0007245!3.07e-07!9;UBERON:0010009!3.07e-07!9;UBERON:0010011!3.07e-07!9;UBERON:0000454!3.07e-07!9;UBERON:0001981!4.38e-07!60;UBERON:0007500!4.38e-07!60;UBERON:0004537!4.38e-07!60;UBERON:0006965!4.38e-07!60;UBERON:0003076!4.50e-07!15;UBERON:0003057!4.50e-07!15;UBERON:0001638!5.35e-07!9;UBERON:0003920!5.35e-07!9;UBERON:0004582!5.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.67e-24;18!UBERON:0001986;1.67e-24;18!UBERON:0004852;1.67e-24;18!UBERON:0007023;2.05e-20;114!UBERON:0000487;8.57e-19;22!UBERON:0002780;8.30e-16;41!UBERON:0001890;8.30e-16;41!UBERON:0006914;9.72e-16;25!UBERON:0001893;2.80e-15;34!UBERON:0003528;5.05e-15;34!UBERON:0002020;5.05e-15;34!UBERON:0001869;7.32e-15;32!UBERON:0002791;7.70e-15;32!UBERON:0000073;1.98e-14;53!UBERON:0002616;1.98e-14;53!UBERON:0002619;6.32e-14;22!UBERON:0003915;9.10e-13;9!UBERON:0004700;9.10e-13;9!UBERON:0001917;9.10e-13;9!UBERON:0001950;1.19e-12;20!UBERON:0000956;1.15e-11;25!UBERON:0000203;1.15e-11;25!UBERON:0000490;1.09e-09;33!UBERON:0000955;1.72e-09;68!UBERON:0001017;1.91e-09;75!UBERON:0002465;1.48e-08;10!UBERON:0000125;3.54e-08;9!UBERON:0002308;3.54e-08;9!UBERON:0001016;6.18e-08;83!UBERON:0002420;7.63e-08;9!UBERON:0007245;7.63e-08;9!UBERON:0010009;7.63e-08;9!UBERON:0010011;7.63e-08;9!UBERON:0000454;7.63e-08;9!UBERON:0001638;1.21e-07;9!UBERON:0003920;1.21e-07;9!UBERON:0004582;1.21e-07;9!UBERON:0001473;6.18e-07;8!UBERON:0004536;6.18e-07;8!UBERON:0006558;6.18e-07;8!UBERON:0000055;8.12e-07;65 | |||
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| ||
|short_description=p3@VWF | |||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p3@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VWF_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 74bp_to_ENST00000540192_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-32 | 24 |
endothelial cell | 1.95e-31 | 36 |
blood vessel endothelial cell | 1.61e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-24 | 18 |
meso-epithelial cell | 8.85e-23 | 45 |
lining cell | 3.45e-15 | 58 |
barrier cell | 3.45e-15 | 58 |
endothelial cell of artery | 8.87e-13 | 9 |
lymphangioblast | 1.00e-09 | 6 |
endothelial cell of lymphatic vessel | 1.00e-09 | 6 |
vascular lymphangioblast | 1.00e-09 | 6 |
vein endothelial cell | 2.62e-09 | 6 |
aortic endothelial cell | 4.71e-09 | 6 |