FFCP PHASE1:Hg19::chr9:8858012..8858034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6E4 | |UniProt=C9J6E4 | ||
|association_with_transcript=-236bp_to_ENST00000481079_5end | |association_with_transcript=-236bp_to_ENST00000481079_5end | ||
|cluster_id=chr9:8858012..8858034,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_10_at_PTPRD_5end | |description=CAGE_peak_10_at_PTPRD_5end | ||
|id=chr9:8858012..8858034,- | |id=chr9:8858012..8858034,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.32e-15;82!UBERON:0006241;1.15e-10;3!UBERON:0003057;1.15e-10;3!UBERON:0006215;2.95e-10;3!UBERON:0010122;5.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-43!57;UBERON:0005068!2.69e-43!57;UBERON:0006241!2.69e-43!57;UBERON:0007135!2.69e-43!57;UBERON:0007023!2.29e-41!115;UBERON:0001017!3.07e-41!82;UBERON:0005743!7.21e-40!86;UBERON:0003075!1.32e-36!86;UBERON:0007284!1.32e-36!86;UBERON:0000073!1.33e-36!94;UBERON:0001016!1.33e-36!94;UBERON:0002616!6.75e-35!59;UBERON:0002346!5.47e-34!90;UBERON:0000955!3.89e-33!69;UBERON:0006238!3.89e-33!69;UBERON:0002780!1.56e-30!41;UBERON:0001890!1.56e-30!41;UBERON:0006240!1.56e-30!41;UBERON:0003080!1.73e-29!42;UBERON:0001893!8.80e-28!34;UBERON:0002020!1.13e-27!34;UBERON:0003528!1.13e-27!34;UBERON:0002791!1.25e-26!33;UBERON:0001869!2.37e-25!32;UBERON:0003056!5.43e-25!61;UBERON:0000153!7.86e-22!129;UBERON:0007811!7.86e-22!129;UBERON:0000033!3.84e-21!123;UBERON:0004121!1.75e-20!169;UBERON:0000924!1.90e-19!173;UBERON:0006601!1.90e-19!173;UBERON:0000956!7.51e-18!25;UBERON:0000203!7.51e-18!25;UBERON:0002619!2.29e-17!22;UBERON:0001950!2.49e-17!20;UBERON:0003076!8.29e-15!15;UBERON:0003057!8.29e-15!15;UBERON:0000025!4.72e-13!194;UBERON:0004732!2.19e-12!13;UBERON:0000064!3.23e-12!219;UBERON:0002308!1.03e-11!9;UBERON:0000125!1.03e-11!9;UBERON:0004733!2.12e-11!12;UBERON:0002028!2.12e-11!12;UBERON:0007277!2.12e-11!12;UBERON:0002420!2.22e-11!9;UBERON:0007245!2.22e-11!9;UBERON:0010009!2.22e-11!9;UBERON:0010011!2.22e-11!9;UBERON:0000454!2.22e-11!9;UBERON:0000483!3.54e-11!309;UBERON:0000119!8.19e-11!312;UBERON:0000477!4.19e-10!286;UBERON:0004111!9.98e-10!241;UBERON:0009663!2.00e-09!7;UBERON:0000922!2.21e-09!612;UBERON:0002298!2.50e-08!8;UBERON:0000200!3.71e-08!6;UBERON:0002680!4.24e-08!9;UBERON:0001895!4.24e-08!9;UBERON:0010092!4.24e-08!9;UBERON:0000468!5.19e-08!659;UBERON:0001871!9.94e-08!7;UBERON:0000062!1.54e-07!511;UBERON:0002050!2.17e-07!605;UBERON:0005423!2.17e-07!605;UBERON:0000467!3.96e-07!625;UBERON:0000923!4.33e-07!604;UBERON:0005291!4.33e-07!604;UBERON:0006598!4.33e-07!604;UBERON:0002532!4.33e-07!604;UBERON:0000480!4.70e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.81e-47;34!UBERON:0000073;4.40e-46;53!UBERON:0002616;4.40e-46;53!UBERON:0003528;6.71e-46;34!UBERON:0002020;6.71e-46;34!UBERON:0002791;1.87e-44;32!UBERON:0001869;2.14e-44;32!UBERON:0002780;4.18e-44;41!UBERON:0001890;4.18e-44;41!UBERON:0002619;6.64e-37;22!UBERON:0001950;7.34e-36;20!UBERON:0000956;4.05e-32;25!UBERON:0000203;4.05e-32;25!UBERON:0000955;2.92e-31;68!UBERON:0001017;6.81e-30;75!UBERON:0000125;1.09e-27;9!UBERON:0002308;1.09e-27;9!UBERON:0001016;8.31e-25;83!UBERON:0004732;3.34e-23;13!UBERON:0009663;1.16e-21;7!UBERON:0002420;1.50e-21;9!UBERON:0007245;1.50e-21;9!UBERON:0010009;1.50e-21;9!UBERON:0010011;1.50e-21;9!UBERON:0000454;1.50e-21;9!UBERON:0004733;9.45e-21;12!UBERON:0002028;9.45e-21;12!UBERON:0002298;9.48e-20;6!UBERON:0007023;8.28e-15;114!UBERON:0000200;1.25e-13;6!UBERON:0002680;9.43e-13;9!UBERON:0001895;9.43e-13;9!UBERON:0000369;1.78e-12;4!UBERON:0002435;1.78e-12;4!UBERON:0000204;1.78e-12;4!UBERON:0011216;9.86e-12;132!UBERON:0001871;3.98e-11;6!UBERON:0002021;5.07e-11;5!UBERON:0000988;5.68e-11;3!UBERON:0001872;8.12e-11;5!UBERON:0002240;1.15e-10;3!UBERON:0005174;1.15e-10;3!UBERON:0001137;1.15e-10;3!UBERON:0001896;1.66e-10;3!UBERON:0005290;1.66e-10;3!UBERON:0005383;1.48e-09;3!UBERON:0005382;1.48e-09;3!UBERON:0010314;3.69e-08;132!UBERON:0002784;7.53e-08;4!UBERON:0001897;8.52e-08;2!UBERON:0010225;8.52e-08;2!UBERON:0002148;9.88e-08;2!UBERON:0006331;9.88e-08;2!UBERON:0009662;9.88e-08;2!UBERON:0001875;1.07e-07;2!UBERON:0006514;1.07e-07;2!UBERON:0001894;1.40e-07;7!UBERON:0005162;1.72e-07;2!UBERON:0000122;1.72e-07;2!UBERON:0002771;2.12e-07;2!UBERON:0001873;5.45e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.45e-91,56;UBERON:0005068,1.45e-91,56;UBERON:0006241,1.45e-91,56;UBERON:0007135,1.45e-91,56;UBERON:0000073,9.81e-83,53;UBERON:0002616,9.81e-83,53;UBERON:0001017,4.27e-76,81;UBERON:0000955,3.08e-72,68;UBERON:0006238,3.08e-72,68;UBERON:0001016,1.37e-70,89;UBERON:0003075,1.57e-65,82;UBERON:0007284,1.57e-65,82;UBERON:0002780,2.66e-62,41;UBERON:0001890,2.66e-62,41;UBERON:0003080,2.66e-62,41;UBERON:0006240,2.66e-62,41;UBERON:0002346,5.34e-62,86;UBERON:0001893,1.36e-56,34;UBERON:0003528,2.46e-56,34;UBERON:0002020,2.46e-56,34;UBERON:0002791,1.08e-50,32;UBERON:0001869,1.50e-50,32;UBERON:0010371,1.93e-49,104;UBERON:0007023,2.14e-44,114;UBERON:0003056,2.44e-42,61;UBERON:0010314,1.16e-38,132;UBERON:0002619,6.55e-37,22;UBERON:0001950,7.23e-36,20;UBERON:0004121,2.63e-33,171;UBERON:0000924,2.63e-33,171;UBERON:0006601,2.63e-33,171;UBERON:0000956,4.00e-32,25;UBERON:0000203,4.00e-32,25;UBERON:0003076,3.17e-29,15;UBERON:0003057,3.17e-29,15;UBERON:0011216,4.98e-28,223;UBERON:0000125,7.41e-28,9;UBERON:0002308,7.41e-28,9;UBERON:0004732,3.48e-23,13;UBERON:0009663,6.52e-22,7;UBERON:0000025,7.66e-22,192;UBERON:0002420,9.97e-22,9;UBERON:0007245,9.97e-22,9;UBERON:0010009,9.97e-22,9;UBERON:0010011,9.97e-22,9;UBERON:0000454,9.97e-22,9;UBERON:0004733,1.03e-20,12;UBERON:0002028,1.03e-20,12;UBERON:0007277,1.03e-20,12;UBERON:0002298,1.12e-19,6;UBERON:0004111,2.81e-16,240;UBERON:0000200,1.41e-13,6;UBERON:0000369,9.79e-13,4;UBERON:0002435,9.79e-13,4;UBERON:0000204,9.79e-13,4;UBERON:0010082,9.79e-13,4;UBERON:0002680,1.05e-12,9;UBERON:0001895,1.05e-12,9;UBERON:0010092,1.05e-12,9;UBERON:0000483,6.01e-12,306;UBERON:0000119,1.00e-11,309;UBERON:0001871,4.26e-11,6;UBERON:0002021,5.02e-11,5;UBERON:0000988,7.04e-11,3;UBERON:0001872,7.74e-11,5;UBERON:0002240,1.01e-10,3;UBERON:0005174,1.01e-10,3;UBERON:0001137,1.01e-10,3;UBERON:0001896,1.59e-10,3;UBERON:0005290,1.59e-10,3;UBERON:0010096,1.59e-10,3;UBERON:0005383,8.68e-10,3;UBERON:0005382,8.68e-10,3;UBERON:0002784,8.38e-08,4;UBERON:0001897,8.39e-08,2;UBERON:0010225,8.39e-08,2;UBERON:0001875,1.13e-07,2;UBERON:0006514,1.13e-07,2;UBERON:0002148,1.20e-07,2;UBERON:0006331,1.20e-07,2;UBERON:0009662,1.20e-07,2;UBERON:0005162,1.61e-07,2;UBERON:0000122,1.61e-07,2;UBERON:0001894,1.69e-07,7;UBERON:0006222,1.69e-07,7;UBERON:0002771,2.53e-07,2;UBERON:0001873,4.06e-07,2;UBERON:0010122,4.06e-07,2;UBERON:0005253,6.46e-07,2 | |||
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|short_description=p10@PTPRD | |short_description=p10@PTPRD | ||
}} | }} |
Latest revision as of 02:15, 18 September 2015
Short description: | p10@PTPRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PTPRD_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -236bp_to_ENST00000481079_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J6E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data