FFCP PHASE1:Hg19::chr3:156008987..156009006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7881 | |EntrezGene=7881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |HGNC=6228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000302490_5end | |association_with_transcript=161bp_to_ENST00000302490_5end | ||
|cluster_id=chr3:156008987..156009006,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_4_at_KCNAB1_5end | |description=CAGE_peak_4_at_KCNAB1_5end | ||
|id=chr3:156008987..156009006,+ | |id=chr3:156008987..156009006,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.25e-12;3!UBERON:0006601;2.72e-09;82!UBERON:0010122;2.94e-09;2 | |||
|ontology_enrichment_disease=DOID:2394!1.99e-08!14 | |ontology_enrichment_disease=DOID:2394!1.99e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.85e-58!57;UBERON:0005068!9.85e-58!57;UBERON:0006241!9.85e-58!57;UBERON:0007135!9.85e-58!57;UBERON:0002616!7.51e-48!59;UBERON:0002780!8.12e-45!41;UBERON:0001890!8.12e-45!41;UBERON:0006240!8.12e-45!41;UBERON:0003075!3.44e-44!86;UBERON:0007284!3.44e-44!86;UBERON:0003080!1.69e-43!42;UBERON:0001017!5.89e-43!82;UBERON:0001893!7.27e-43!34;UBERON:0000955!8.02e-43!69;UBERON:0006238!8.02e-43!69;UBERON:0007023!1.33e-42!115;UBERON:0002020!1.43e-42!34;UBERON:0003528!1.43e-42!34;UBERON:0005743!3.45e-42!86;UBERON:0002346!1.66e-41!90;UBERON:0002791!4.77e-41!33;UBERON:0001869!5.20e-40!32;UBERON:0000073!2.87e-38!94;UBERON:0001016!2.87e-38!94;UBERON:0002619!2.94e-32!22;UBERON:0003056!7.01e-32!61;UBERON:0000025!3.06e-30!194;UBERON:0001950!6.60e-29!20;UBERON:0000956!1.01e-27!25;UBERON:0000203!1.01e-27!25;UBERON:0000153!1.43e-25!129;UBERON:0007811!1.43e-25!129;UBERON:0000033!5.37e-25!123;UBERON:0004111!9.00e-24!241;UBERON:0000477!1.15e-20!286;UBERON:0004121!4.01e-18!169;UBERON:0000483!1.93e-17!309;UBERON:0000924!2.39e-17!173;UBERON:0006601!2.39e-17!173;UBERON:0000119!4.59e-17!312;UBERON:0002308!1.15e-16!9;UBERON:0000125!1.15e-16!9;UBERON:0003076!8.48e-15!15;UBERON:0003057!8.48e-15!15;UBERON:0009663!9.03e-14!7;UBERON:0002420!2.22e-13!9;UBERON:0007245!2.22e-13!9;UBERON:0010009!2.22e-13!9;UBERON:0010011!2.22e-13!9;UBERON:0000454!2.22e-13!9;UBERON:0000200!1.12e-11!6;UBERON:0004733!5.77e-11!12;UBERON:0002028!5.77e-11!12;UBERON:0007277!5.77e-11!12;UBERON:0002021!4.35e-10!5;UBERON:0004732!5.81e-10!13;UBERON:0001872!7.00e-10!5;UBERON:0002298!7.92e-10!8;UBERON:0000369!3.79e-09!4;UBERON:0002435!3.79e-09!4;UBERON:0000204!3.79e-09!4;UBERON:0010082!3.79e-09!4;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0001871!9.77e-08!7;UBERON:0000922!1.11e-07!612;UBERON:0000481!1.89e-07!347;UBERON:0005383!2.91e-07!3;UBERON:0005382!2.91e-07!3;UBERON:0000475!3.47e-07!365;UBERON:0002680!4.60e-07!9;UBERON:0001895!4.60e-07!9;UBERON:0010092!4.60e-07!9;UBERON:0000992!4.67e-07!13;UBERON:0000923!9.91e-07!604;UBERON:0005291!9.91e-07!604;UBERON:0006598!9.91e-07!604;UBERON:0002532!9.91e-07!604 | |ontology_enrichment_uberon=UBERON:0001049!9.85e-58!57;UBERON:0005068!9.85e-58!57;UBERON:0006241!9.85e-58!57;UBERON:0007135!9.85e-58!57;UBERON:0002616!7.51e-48!59;UBERON:0002780!8.12e-45!41;UBERON:0001890!8.12e-45!41;UBERON:0006240!8.12e-45!41;UBERON:0003075!3.44e-44!86;UBERON:0007284!3.44e-44!86;UBERON:0003080!1.69e-43!42;UBERON:0001017!5.89e-43!82;UBERON:0001893!7.27e-43!34;UBERON:0000955!8.02e-43!69;UBERON:0006238!8.02e-43!69;UBERON:0007023!1.33e-42!115;UBERON:0002020!1.43e-42!34;UBERON:0003528!1.43e-42!34;UBERON:0005743!3.45e-42!86;UBERON:0002346!1.66e-41!90;UBERON:0002791!4.77e-41!33;UBERON:0001869!5.20e-40!32;UBERON:0000073!2.87e-38!94;UBERON:0001016!2.87e-38!94;UBERON:0002619!2.94e-32!22;UBERON:0003056!7.01e-32!61;UBERON:0000025!3.06e-30!194;UBERON:0001950!6.60e-29!20;UBERON:0000956!1.01e-27!25;UBERON:0000203!1.01e-27!25;UBERON:0000153!1.43e-25!129;UBERON:0007811!1.43e-25!129;UBERON:0000033!5.37e-25!123;UBERON:0004111!9.00e-24!241;UBERON:0000477!1.15e-20!286;UBERON:0004121!4.01e-18!169;UBERON:0000483!1.93e-17!309;UBERON:0000924!2.39e-17!173;UBERON:0006601!2.39e-17!173;UBERON:0000119!4.59e-17!312;UBERON:0002308!1.15e-16!9;UBERON:0000125!1.15e-16!9;UBERON:0003076!8.48e-15!15;UBERON:0003057!8.48e-15!15;UBERON:0009663!9.03e-14!7;UBERON:0002420!2.22e-13!9;UBERON:0007245!2.22e-13!9;UBERON:0010009!2.22e-13!9;UBERON:0010011!2.22e-13!9;UBERON:0000454!2.22e-13!9;UBERON:0000200!1.12e-11!6;UBERON:0004733!5.77e-11!12;UBERON:0002028!5.77e-11!12;UBERON:0007277!5.77e-11!12;UBERON:0002021!4.35e-10!5;UBERON:0004732!5.81e-10!13;UBERON:0001872!7.00e-10!5;UBERON:0002298!7.92e-10!8;UBERON:0000369!3.79e-09!4;UBERON:0002435!3.79e-09!4;UBERON:0000204!3.79e-09!4;UBERON:0010082!3.79e-09!4;UBERON:0001637!1.01e-08!42;UBERON:0003509!1.01e-08!42;UBERON:0004572!1.01e-08!42;UBERON:0001871!9.77e-08!7;UBERON:0000922!1.11e-07!612;UBERON:0000481!1.89e-07!347;UBERON:0005383!2.91e-07!3;UBERON:0005382!2.91e-07!3;UBERON:0000475!3.47e-07!365;UBERON:0002680!4.60e-07!9;UBERON:0001895!4.60e-07!9;UBERON:0010092!4.60e-07!9;UBERON:0000992!4.67e-07!13;UBERON:0000923!9.91e-07!604;UBERON:0005291!9.91e-07!604;UBERON:0006598!9.91e-07!604;UBERON:0002532!9.91e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.47e-64;32!UBERON:0002791;3.24e-59;32!UBERON:0003528;2.55e-57;34!UBERON:0002020;2.55e-57;34!UBERON:0001893;1.18e-56;34!UBERON:0002619;5.47e-54;22!UBERON:0001950;2.19e-47;20!UBERON:0000956;3.41e-47;25!UBERON:0000203;3.41e-47;25!UBERON:0002780;1.14e-46;41!UBERON:0001890;1.14e-46;41!UBERON:0000073;2.20e-35;53!UBERON:0002616;2.20e-35;53!UBERON:0000955;5.26e-27;68!UBERON:0001017;2.10e-24;75!UBERON:0000200;4.33e-22;6!UBERON:0002420;1.90e-20;9!UBERON:0000125;1.90e-20;9!UBERON:0007245;1.90e-20;9!UBERON:0002308;1.90e-20;9!UBERON:0010009;1.90e-20;9!UBERON:0010011;1.90e-20;9!UBERON:0000454;1.90e-20;9!UBERON:0009663;4.61e-20;7!UBERON:0002021;8.48e-19;5!UBERON:0001016;2.80e-18;83!UBERON:0000369;9.28e-17;4!UBERON:0002435;9.28e-17;4!UBERON:0000204;9.28e-17;4!UBERON:0005383;5.49e-13;3!UBERON:0005382;5.49e-13;3!UBERON:0001872;1.17e-12;5!UBERON:0000349;3.02e-12;5!UBERON:0001870;9.71e-12;3!UBERON:0007023;3.77e-11;114!UBERON:0001873;2.94e-09;2!UBERON:0001875;1.66e-08;2!UBERON:0006514;1.66e-08;2!UBERON:0001954;2.01e-08;2!UBERON:0003022;2.01e-08;2!UBERON:0002421;2.01e-08;2!UBERON:0002600;2.01e-08;2!UBERON:0001871;2.18e-08;6!UBERON:0002702;2.29e-08;2!UBERON:0002771;3.77e-08;2!UBERON:0011216;1.03e-07;132!UBERON:0004733;1.53e-07;12!UBERON:0002028;1.53e-07;12!UBERON:0004732;6.18e-07;13!UBERON:0002680;6.95e-07;9!UBERON:0001895;6.95e-07;9 | |||
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|short_description=p4@KCNAB1 | |short_description=p4@KCNAB1 | ||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p4@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNAB1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 161bp_to_ENST00000302490_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data