FFCP PHASE1:Hg19::chr9:8857983..8857998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6E4 | |UniProt=C9J6E4 | ||
|association_with_transcript=-207bp_to_ENST00000481079_5end | |association_with_transcript=-207bp_to_ENST00000481079_5end | ||
|cluster_id=chr9:8857983..8857998,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_PTPRD_5end | |description=CAGE_peak_4_at_PTPRD_5end | ||
|id=chr9:8857983..8857998,- | |id=chr9:8857983..8857998,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.40e-15;82!UBERON:0006241;1.94e-08;3!UBERON:0003057;1.94e-08;3!UBERON:0006215;7.28e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-50!115;UBERON:0001049!3.92e-44!57;UBERON:0005068!3.92e-44!57;UBERON:0006241!3.92e-44!57;UBERON:0007135!3.92e-44!57;UBERON:0005743!2.45e-41!86;UBERON:0001017!3.04e-40!82;UBERON:0002616!4.89e-37!59;UBERON:0000073!2.53e-36!94;UBERON:0001016!2.53e-36!94;UBERON:0003075!7.58e-36!86;UBERON:0007284!7.58e-36!86;UBERON:0002780!3.61e-35!41;UBERON:0001890!3.61e-35!41;UBERON:0006240!3.61e-35!41;UBERON:0000955!5.23e-34!69;UBERON:0006238!5.23e-34!69;UBERON:0003080!6.19e-34!42;UBERON:0002346!4.13e-33!90;UBERON:0001893!2.98e-31!34;UBERON:0002020!3.93e-31!34;UBERON:0003528!3.93e-31!34;UBERON:0002791!3.38e-30!33;UBERON:0001869!4.99e-29!32;UBERON:0003056!8.39e-28!61;UBERON:0000153!1.14e-23!129;UBERON:0007811!1.14e-23!129;UBERON:0000033!3.39e-22!123;UBERON:0000956!3.80e-22!25;UBERON:0000203!3.80e-22!25;UBERON:0002619!4.00e-21!22;UBERON:0004121!4.66e-21!169;UBERON:0000924!6.58e-20!173;UBERON:0006601!6.58e-20!173;UBERON:0001950!2.88e-19!20;UBERON:0000064!3.90e-14!219;UBERON:0000025!1.26e-13!194;UBERON:0000477!4.10e-12!286;UBERON:0004111!5.46e-12!241;UBERON:0000922!3.76e-11!612;UBERON:0003076!4.36e-11!15;UBERON:0003057!4.36e-11!15;UBERON:0002308!1.93e-10!9;UBERON:0000125!1.93e-10!9;UBERON:0002420!2.83e-10!9;UBERON:0007245!2.83e-10!9;UBERON:0010009!2.83e-10!9;UBERON:0010011!2.83e-10!9;UBERON:0000454!2.83e-10!9;UBERON:0000062!5.65e-10!511;UBERON:0000119!9.32e-10!312;UBERON:0000483!9.70e-10!309;UBERON:0000481!1.49e-09!347;UBERON:0000468!3.32e-09!659;UBERON:0000923!4.65e-09!604;UBERON:0005291!4.65e-09!604;UBERON:0006598!4.65e-09!604;UBERON:0002532!4.65e-09!604;UBERON:0004732!4.88e-09!13;UBERON:0002050!5.82e-09!605;UBERON:0005423!5.82e-09!605;UBERON:0000467!6.49e-09!625;UBERON:0000480!8.11e-09!626;UBERON:0000475!1.28e-08!365;UBERON:0009663!1.91e-08!7;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0000200!1.79e-07!6;UBERON:0002298!2.27e-07!8;UBERON:0001871!6.24e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-50!115;UBERON:0001049!3.92e-44!57;UBERON:0005068!3.92e-44!57;UBERON:0006241!3.92e-44!57;UBERON:0007135!3.92e-44!57;UBERON:0005743!2.45e-41!86;UBERON:0001017!3.04e-40!82;UBERON:0002616!4.89e-37!59;UBERON:0000073!2.53e-36!94;UBERON:0001016!2.53e-36!94;UBERON:0003075!7.58e-36!86;UBERON:0007284!7.58e-36!86;UBERON:0002780!3.61e-35!41;UBERON:0001890!3.61e-35!41;UBERON:0006240!3.61e-35!41;UBERON:0000955!5.23e-34!69;UBERON:0006238!5.23e-34!69;UBERON:0003080!6.19e-34!42;UBERON:0002346!4.13e-33!90;UBERON:0001893!2.98e-31!34;UBERON:0002020!3.93e-31!34;UBERON:0003528!3.93e-31!34;UBERON:0002791!3.38e-30!33;UBERON:0001869!4.99e-29!32;UBERON:0003056!8.39e-28!61;UBERON:0000153!1.14e-23!129;UBERON:0007811!1.14e-23!129;UBERON:0000033!3.39e-22!123;UBERON:0000956!3.80e-22!25;UBERON:0000203!3.80e-22!25;UBERON:0002619!4.00e-21!22;UBERON:0004121!4.66e-21!169;UBERON:0000924!6.58e-20!173;UBERON:0006601!6.58e-20!173;UBERON:0001950!2.88e-19!20;UBERON:0000064!3.90e-14!219;UBERON:0000025!1.26e-13!194;UBERON:0000477!4.10e-12!286;UBERON:0004111!5.46e-12!241;UBERON:0000922!3.76e-11!612;UBERON:0003076!4.36e-11!15;UBERON:0003057!4.36e-11!15;UBERON:0002308!1.93e-10!9;UBERON:0000125!1.93e-10!9;UBERON:0002420!2.83e-10!9;UBERON:0007245!2.83e-10!9;UBERON:0010009!2.83e-10!9;UBERON:0010011!2.83e-10!9;UBERON:0000454!2.83e-10!9;UBERON:0000062!5.65e-10!511;UBERON:0000119!9.32e-10!312;UBERON:0000483!9.70e-10!309;UBERON:0000481!1.49e-09!347;UBERON:0000468!3.32e-09!659;UBERON:0000923!4.65e-09!604;UBERON:0005291!4.65e-09!604;UBERON:0006598!4.65e-09!604;UBERON:0002532!4.65e-09!604;UBERON:0004732!4.88e-09!13;UBERON:0002050!5.82e-09!605;UBERON:0005423!5.82e-09!605;UBERON:0000467!6.49e-09!625;UBERON:0000480!8.11e-09!626;UBERON:0000475!1.28e-08!365;UBERON:0009663!1.91e-08!7;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0000200!1.79e-07!6;UBERON:0002298!2.27e-07!8;UBERON:0001871!6.24e-07!7 | ||
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| ||
|short_description=p4@PTPRD | |short_description=p4@PTPRD | ||
}} | }} |
Latest revision as of 02:14, 18 September 2015
Short description: | p4@PTPRD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRD_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -207bp_to_ENST00000481079_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J6E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data