FFCP PHASE1:Hg19::chrX:137793808..137793823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2258 | |EntrezGene=2258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3670 | |HGNC=3670 | ||
|TSSclassifier=strong | |||
|UniProt=Q92913,A8K1P5 | |UniProt=Q92913,A8K1P5 | ||
|association_with_transcript=3bp_to_ENST00000315930,NM_004114,uc004fam.2_5end | |association_with_transcript=3bp_to_ENST00000315930,NM_004114,uc004fam.2_5end | ||
|cluster_id=chrX:137793808..137793823,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_FGF13_5end | |description=CAGE_peak_3_at_FGF13_5end | ||
|id=chrX:137793808..137793823,- | |id=chrX:137793808..137793823,- | ||
|ontology_enrichment_celltype=CL:0000540!7.56e-09!6;CL:0000031!7.56e-09!6;CL:0000404!7.56e-09!6;CL:0000047!2.69e-08!8;CL:0002322!8.71e-08!5 | |ontology_enrichment_celltype=CL:0000540!7.56e-09!6;CL:0000031!7.56e-09!6;CL:0000404!7.56e-09!6;CL:0000047!2.69e-08!8;CL:0002322!8.71e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.46e-13;5!CL:0000039;3.05e-10;7!CL:0000586;3.05e-10;7!CL:0000540;6.01e-08;6!CL:0000404;6.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.33e-14,5;CL:0000039,3.05e-10,7;CL:0000586,3.05e-10,7;CL:0000540,7.12e-08,6;CL:0000031,7.12e-08,6;CL:0000404,7.12e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.45e-10;82!CL:0000031;6.01e-08;6!UBERON:0010122;1.24e-07;2 | |||
|ontology_enrichment_disease=DOID:3095!5.99e-07!22;DOID:2994!5.99e-07!22 | |ontology_enrichment_disease=DOID:3095!5.99e-07!22;DOID:2994!5.99e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.22e-58;32!UBERON:0003528;5.49e-57;34!UBERON:0002020;5.49e-57;34!UBERON:0002791;2.05e-54;32!UBERON:0002619;3.16e-53;22!UBERON:0001893;1.49e-52;34!UBERON:0001950;3.13e-47;20!UBERON:0002780;6.69e-47;41!UBERON:0001890;6.69e-47;41!UBERON:0000956;2.16e-46;25!UBERON:0000203;2.16e-46;25!UBERON:0000073;3.27e-32;53!UBERON:0002616;3.27e-32;53!UBERON:0000955;2.02e-24;68!UBERON:0001017;9.98e-22;75!UBERON:0002420;2.59e-21;9!UBERON:0007245;2.59e-21;9!UBERON:0010009;2.59e-21;9!UBERON:0010011;2.59e-21;9!UBERON:0000454;2.59e-21;9!UBERON:0000125;9.67e-21;9!UBERON:0002308;9.67e-21;9!UBERON:0000200;1.00e-17;6!UBERON:0001016;9.21e-17;83!UBERON:0000349;3.72e-16;5!UBERON:0009663;7.38e-16;7!UBERON:0001871;1.63e-15;6!UBERON:0001872;6.88e-15;5!UBERON:0000369;1.43e-13;4!UBERON:0002435;1.43e-13;4!UBERON:0000204;1.43e-13;4!UBERON:0005383;1.13e-10;3!UBERON:0005382;1.13e-10;3!UBERON:0001870;8.92e-10;3!UBERON:0002021;1.48e-09;5!UBERON:0007023;9.63e-08;114!UBERON:0001954;1.06e-07;2!UBERON:0003022;1.06e-07;2!UBERON:0002421;1.06e-07;2!UBERON:0002600;1.06e-07;2!UBERON:0001873;1.24e-07;2!UBERON:0000922;2.03e-07;49!UBERON:0001876;3.09e-07;2!UBERON:0002771;5.49e-07;2!UBERON:0002702;5.49e-07;2!UBERON:0001875;8.95e-07;2!UBERON:0006514;8.95e-07;2!UBERON:0001894;9.49e-07;7!UBERON:0002784;9.79e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.31e-66,41;UBERON:0001890,3.31e-66,41;UBERON:0003080,3.31e-66,41;UBERON:0006240,3.31e-66,41;UBERON:0003528,5.66e-66,34;UBERON:0002020,5.66e-66,34;UBERON:0001869,6.18e-66,32;UBERON:0001893,1.05e-61,34;UBERON:0002791,5.54e-61,32;UBERON:0000073,8.50e-60,53;UBERON:0002616,8.50e-60,53;UBERON:0001017,1.95e-56,81;UBERON:0001049,3.93e-56,56;UBERON:0005068,3.93e-56,56;UBERON:0006241,3.93e-56,56;UBERON:0007135,3.93e-56,56;UBERON:0002619,2.93e-53,22;UBERON:0000955,1.14e-52,68;UBERON:0006238,1.14e-52,68;UBERON:0001016,8.63e-50,89;UBERON:0001950,3.03e-47,20;UBERON:0000956,2.02e-46,25;UBERON:0000203,2.02e-46,25;UBERON:0003056,6.48e-42,61;UBERON:0003075,1.70e-35,82;UBERON:0007284,1.70e-35,82;UBERON:0002346,2.02e-33,86;UBERON:0010371,8.33e-28,104;UBERON:0007023,2.36e-23,114;UBERON:0004121,2.84e-22,171;UBERON:0000924,2.84e-22,171;UBERON:0006601,2.84e-22,171;UBERON:0010314,2.58e-21,132;UBERON:0002420,2.59e-21,9;UBERON:0007245,2.59e-21,9;UBERON:0010009,2.59e-21,9;UBERON:0010011,2.59e-21,9;UBERON:0000454,2.59e-21,9;UBERON:0000125,1.10e-20,9;UBERON:0002308,1.10e-20,9;UBERON:0011216,1.04e-18,223;UBERON:0000200,9.44e-18,6;UBERON:0000349,3.24e-16,5;UBERON:0009663,7.98e-16,7;UBERON:0001871,1.55e-15,6;UBERON:0001872,5.95e-15,5;UBERON:0000369,1.55e-13,4;UBERON:0002435,1.55e-13,4;UBERON:0000204,1.55e-13,4;UBERON:0010082,1.55e-13,4;UBERON:0000025,1.11e-12,192;UBERON:0005383,1.23e-10,3;UBERON:0005382,1.23e-10,3;UBERON:0001870,9.48e-10,3;UBERON:0002021,1.59e-09,5;UBERON:0004111,2.47e-08,240;UBERON:0001954,1.01e-07,2;UBERON:0003022,1.01e-07,2;UBERON:0002421,1.01e-07,2;UBERON:0002600,1.01e-07,2;UBERON:0001873,1.34e-07,2;UBERON:0010122,1.34e-07,2;UBERON:0001876,2.82e-07,2;UBERON:0002702,5.66e-07,2;UBERON:0002771,6.01e-07,2;UBERON:0001894,8.78e-07,7;UBERON:0006222,8.78e-07,7;UBERON:0002784,8.83e-07,4;UBERON:0001875,9.09e-07,2;UBERON:0006514,9.09e-07,2 | |||
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|short_description=p3@FGF13 | |short_description=p3@FGF13 | ||
}} | }} |
Latest revision as of 16:10, 19 September 2015
Short description: | p3@FGF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGF13_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 3bp_to_ENST00000315930, NM_004114, uc004fam.2_5end |
EntrezGene: | FGF13 |
HGNC: | 3670 |
UniProt: | Q92913A8K1P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.33e-14 | 5 |
germ line cell | 3.05e-10 | 7 |
germ cell | 3.05e-10 | 7 |
neuron | 7.12e-08 | 6 |
neuroblast | 7.12e-08 | 6 |
electrically signaling cell | 7.12e-08 | 6 |