FFCP PHASE1:Hg19::chr12:5019061..5019078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3736 | |EntrezGene=3736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6218 | |HGNC=6218 | ||
|TSSclassifier=strong | |||
|UniProt=Q09470 | |UniProt=Q09470 | ||
|association_with_transcript=0bp_to_ENST00000382545,NM_000217,uc001qnh.2_5end | |association_with_transcript=0bp_to_ENST00000382545,NM_000217,uc001qnh.2_5end | ||
|cluster_id=chr12:5019061..5019078,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_KCNA1_5end | |description=CAGE_peak_1_at_KCNA1_5end | ||
|id=chr12:5019061..5019078,+ | |id=chr12:5019061..5019078,+ | ||
|ontology_enrichment_celltype=CL:0000128;3.54e-08;7!CL:0000126;3.54e-08;7!CL:0000127;3.54e-08;7!CL:0002603;6.32e-08;3!CL:0000064;1.15e-07;3!CL:0000067;1.15e-07;3!CL:0005012;1.15e-07;3!CL:0002304;1.15e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000128;3.54e-08;7!CL:0000126;3.54e-08;7!CL:0000127;3.54e-08;7!CL:0002603;6.32e-08;3!CL:0000064;1.15e-07;3!CL:0000067;1.15e-07;3!CL:0005012;1.15e-07;3!CL:0002304;1.15e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.55e-08,7;CL:0000126,3.55e-08,7;CL:0000127,3.55e-08,7;CL:0002453,3.55e-08,7;CL:0002603,5.34e-08,3;CL:0000064,1.24e-07,3;CL:0000067,1.24e-07,3;CL:0005012,1.24e-07,3;CL:0002304,1.24e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.95e-16;82!UBERON:0006215;2.27e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001869;4.44e-53;32!UBERON:0001893;6.28e-53;34!UBERON:0000073;3.51e-52;53!UBERON:0002616;3.51e-52;53!UBERON:0003528;2.78e-51;34!UBERON:0002020;2.78e-51;34!UBERON:0002791;1.72e-49;32!UBERON:0002780;2.92e-46;41!UBERON:0001890;2.92e-46;41!UBERON:0000956;1.87e-43;25!UBERON:0000203;1.87e-43;25!UBERON:0002619;1.04e-41;22!UBERON:0001950;3.10e-37;20!UBERON:0000955;1.48e-34;68!UBERON:0001017;2.17e-33;75!UBERON:0004733;1.57e-28;12!UBERON:0002028;1.57e-28;12!UBERON:0001016;1.45e-26;83!UBERON:0004732;4.24e-26;13!UBERON:0002680;3.20e-22;9!UBERON:0001895;3.20e-22;9!UBERON:0002420;3.68e-17;9!UBERON:0007245;3.68e-17;9!UBERON:0010009;3.68e-17;9!UBERON:0010011;3.68e-17;9!UBERON:0000454;3.68e-17;9!UBERON:0000125;6.39e-17;9!UBERON:0002308;6.39e-17;9!UBERON:0000200;3.05e-16;6!UBERON:0002037;1.43e-15;6!UBERON:0007023;7.40e-15;114!UBERON:0002298;1.17e-14;6!UBERON:0001872;2.61e-13;5!UBERON:0000349;5.35e-13;5!UBERON:0009663;7.08e-13;7!UBERON:0000369;3.20e-11;4!UBERON:0002435;3.20e-11;4!UBERON:0000204;3.20e-11;4!UBERON:0011216;6.35e-11;132!UBERON:0001871;3.13e-09;6!UBERON:0002021;3.46e-09;5!UBERON:0001870;6.19e-09;3!UBERON:0005383;1.01e-08;3!UBERON:0005382;1.01e-08;3!UBERON:0010314;1.72e-08;132!UBERON:0001894;1.97e-08;7!UBERON:0000988;2.39e-08;3!UBERON:0001896;5.46e-08;3!UBERON:0005290;5.46e-08;3!UBERON:0001778;1.15e-07;3!UBERON:0001775;1.15e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.80e-67!57;UBERON:0005068!6.80e-67!57;UBERON:0006241!6.80e-67!57;UBERON:0007135!6.80e-67!57;UBERON:0002616!8.30e-61!59;UBERON:0001017!2.22e-59!82;UBERON:0005743!1.40e-57!86;UBERON:0003075!6.72e-56!86;UBERON:0007284!6.72e-56!86;UBERON:0000955!3.66e-55!69;UBERON:0006238!3.66e-55!69;UBERON:0007023!1.46e-53!115;UBERON:0002346!2.08e-52!90;UBERON:0000073!5.00e-50!94;UBERON:0001016!5.00e-50!94;UBERON:0000153!2.27e-47!129;UBERON:0007811!2.27e-47!129;UBERON:0003080!5.83e-47!42;UBERON:0002780!5.76e-46!41;UBERON:0001890!5.76e-46!41;UBERON:0006240!5.76e-46!41;UBERON:0000033!1.07e-44!123;UBERON:0001893!2.72e-40!34;UBERON:0003056!3.30e-40!61;UBERON:0002020!5.57e-40!34;UBERON:0003528!5.57e-40!34;UBERON:0002791!8.58e-39!33;UBERON:0001869!2.06e-38!32;UBERON:0004121!5.96e-36!169;UBERON:0000924!1.61e-34!173;UBERON:0006601!1.61e-34!173;UBERON:0000956!4.74e-29!25;UBERON:0000203!4.74e-29!25;UBERON:0002619!2.41e-26!22;UBERON:0001950!8.91e-24!20;UBERON:0003076!2.61e-20!15;UBERON:0003057!2.61e-20!15;UBERON:0004733!5.03e-17!12;UBERON:0002028!5.03e-17!12;UBERON:0007277!5.03e-17!12;UBERON:0004732!2.05e-15!13;UBERON:0000475!2.34e-15!365;UBERON:0000064!2.17e-14!219;UBERON:0000477!4.13e-14!286;UBERON:0002680!1.91e-13!9;UBERON:0001895!1.91e-13!9;UBERON:0010092!1.91e-13!9;UBERON:0002420!1.88e-12!9;UBERON:0007245!1.88e-12!9;UBERON:0010009!1.88e-12!9;UBERON:0010011!1.88e-12!9;UBERON:0000454!1.88e-12!9;UBERON:0000119!2.52e-12!312;UBERON:0000481!2.53e-12!347;UBERON:0002308!2.95e-12!9;UBERON:0000125!2.95e-12!9;UBERON:0000483!3.34e-12!309;UBERON:0000025!4.89e-12!194;UBERON:0004111!5.77e-11!241;UBERON:0002298!1.52e-10!8;UBERON:0000200!5.34e-10!6;UBERON:0009663!6.17e-10!7;UBERON:0002037!1.18e-09!6;UBERON:0006215!1.18e-09!6;UBERON:0000062!3.05e-09!511;UBERON:0000922!4.11e-09!612;UBERON:0001871!5.89e-09!7;UBERON:0001872!2.48e-08!5;UBERON:0000349!3.83e-08!5;UBERON:0000468!1.30e-07!659;UBERON:0000369!4.23e-07!4;UBERON:0002435!4.23e-07!4;UBERON:0000204!4.23e-07!4;UBERON:0010082!4.23e-07!4;UBERON:0001894!4.26e-07!7;UBERON:0006222!4.26e-07!7;UBERON:0000923!8.15e-07!604;UBERON:0005291!8.15e-07!604;UBERON:0006598!8.15e-07!604;UBERON:0002532!8.15e-07!604;UBERON:0002050!9.43e-07!605;UBERON:0005423!9.43e-07!605 | |||
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|short_description=p1@KCNA1 | |short_description=p1@KCNA1 | ||
}} | }} |
Latest revision as of 17:14, 18 September 2015
Short description: | p1@KCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000382545, NM_000217, uc001qnh.2_5end |
EntrezGene: | KCNA1 |
HGNC: | 6218 |
UniProt: | Q09470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.55e-08 | 7 |
macroglial cell | 3.55e-08 | 7 |
astrocyte | 3.55e-08 | 7 |
oligodendrocyte precursor cell | 3.55e-08 | 7 |
astrocyte of the cerebellum | 5.34e-08 | 3 |
ciliated cell | 1.24e-07 | 3 |
ciliated epithelial cell | 1.24e-07 | 3 |
multi-ciliated epithelial cell | 1.24e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.24e-07 | 3 |