FFCP PHASE1:Hg19::chr3:147139053..147139112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000474034_5end | |association_with_transcript=-1bp_to_ENST00000474034_5end | ||
|cluster_id=chr3:147139053..147139112,+ | |||
|coexpression_cluster_id=C711 | |coexpression_cluster_id=C711 | ||
|description=CAGE_peak_5_at_ZIC1_5end | |description=CAGE_peak_5_at_ZIC1_5end | ||
|id=chr3:147139053..147139112,+ | |id=chr3:147139053..147139112,+ | ||
|ontology_enrichment_celltype=CL:0002559;8.17e-16;5!CL:0000128;7.32e-11;7!CL:0000126;7.32e-11;7!CL:0000127;7.32e-11;7!CL:0002603;1.15e-10;3!CL:0000064;2.08e-10;3!CL:0000067;2.08e-10;3!CL:0005012;2.08e-10;3!CL:0002304;2.08e-10;3!CL:0000708;3.91e-10;3!CL:0002590;3.97e-10;3!CL:0000346;4.28e-10;3!CL:1000428;4.28e-10;3!CL:0002575;6.89e-08;2!CL:0002549;8.50e-08;2!CL:0000306;1.35e-07;4!CL:0002222;1.35e-07;4!CL:0002224;1.35e-07;4!CL:0002561;2.06e-07;2 | |ontology_enrichment_celltype=CL:0000128!2.95e-08!7;CL:0000126!2.95e-08!7;CL:0000127!2.95e-08!7;CL:0002453!2.95e-08!7;CL:0002559!1.37e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002559;8.17e-16;5!CL:0000128;7.32e-11;7!CL:0000126;7.32e-11;7!CL:0000127;7.32e-11;7!CL:0002603;1.15e-10;3!CL:0000064;2.08e-10;3!CL:0000067;2.08e-10;3!CL:0005012;2.08e-10;3!CL:0002304;2.08e-10;3!CL:0000708;3.91e-10;3!CL:0002590;3.97e-10;3!CL:0000346;4.28e-10;3!CL:1000428;4.28e-10;3!CL:0002575;6.89e-08;2!CL:0002549;8.50e-08;2!CL:0000306;1.35e-07;4!CL:0002222;1.35e-07;4!CL:0002224;1.35e-07;4!CL:0002561;2.06e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002559,6.93e-16,5;CL:0000128,9.71e-11,7;CL:0000126,9.71e-11,7;CL:0000127,9.71e-11,7;CL:0002453,9.71e-11,7;CL:0002603,1.20e-10,3;CL:0000064,2.05e-10,3;CL:0000067,2.05e-10,3;CL:0005012,2.05e-10,3;CL:0002304,2.05e-10,3;CL:0000346,3.80e-10,3;CL:1000428,3.80e-10,3;CL:0000708,3.80e-10,3;CL:0002590,4.04e-10,3;CL:0002575,6.90e-08,2;CL:0002549,8.65e-08,2;CL:0000306,1.34e-07,4;CL:0002222,1.34e-07,4;CL:0002224,1.34e-07,4;CL:0002561,1.97e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.33e-11;3!UBERON:0006241;7.06e-10;3!UBERON:0003057;7.06e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON: | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.98e-55!82;UBERON:0005743!6.18e-54!86;UBERON:0002616!1.74e-52!59;UBERON:0001049!3.02e-49!57;UBERON:0005068!3.02e-49!57;UBERON:0006241!3.02e-49!57;UBERON:0007135!3.02e-49!57;UBERON:0000073!7.43e-49!94;UBERON:0001016!7.43e-49!94;UBERON:0000955!1.54e-47!69;UBERON:0006238!1.54e-47!69;UBERON:0003075!1.15e-45!86;UBERON:0007284!1.15e-45!86;UBERON:0002346!8.54e-43!90;UBERON:0004121!9.20e-36!169;UBERON:0000924!2.16e-34!173;UBERON:0006601!2.16e-34!173;UBERON:0000033!1.85e-33!123;UBERON:0000153!2.34e-33!129;UBERON:0007811!2.34e-33!129;UBERON:0003056!9.00e-30!61;UBERON:0002780!3.02e-29!41;UBERON:0001890!3.02e-29!41;UBERON:0006240!3.02e-29!41;UBERON:0003080!2.58e-28!42;UBERON:0002020!3.74e-27!34;UBERON:0003528!3.74e-27!34;UBERON:0001893!4.34e-27!34;UBERON:0002791!5.61e-26!33;UBERON:0001869!1.13e-24!32;UBERON:0003076!1.79e-23!15;UBERON:0003057!1.79e-23!15;UBERON:0007023!2.13e-22!115;UBERON:0004732!2.42e-20!13;UBERON:0004733!4.04e-19!12;UBERON:0002028!4.04e-19!12;UBERON:0007277!4.04e-19!12;UBERON:0000475!3.33e-18!365;UBERON:0000956!1.34e-16!25;UBERON:0000203!1.34e-16!25;UBERON:0000119!3.15e-15!312;UBERON:0002680!6.70e-15!9;UBERON:0001895!6.70e-15!9;UBERON:0010092!6.70e-15!9;UBERON:0000483!1.76e-13!309;UBERON:0002619!2.06e-13!22;UBERON:0002308!8.25e-13!9;UBERON:0000125!8.25e-13!9;UBERON:0002200!4.11e-12!11;UBERON:0006876!4.11e-12!11;UBERON:0001950!2.74e-11!20;UBERON:0002037!3.65e-11!6;UBERON:0006215!3.65e-11!6;UBERON:0009663!2.65e-10!7;UBERON:0002420!5.33e-10!9;UBERON:0007245!5.33e-10!9;UBERON:0010009!5.33e-10!9;UBERON:0010011!5.33e-10!9;UBERON:0000454!5.33e-10!9;UBERON:0000064!1.01e-09!219;UBERON:0005284!2.58e-09!5;UBERON:0002298!2.64e-09!8;UBERON:0005174!1.69e-08!5;UBERON:0001137!1.69e-08!5;UBERON:0000481!9.15e-08!347;UBERON:0000488!1.01e-07!4;UBERON:0002073!1.37e-07!4;UBERON:0005086!1.37e-07!4;UBERON:0002097!1.77e-07!40;UBERON:0002067!2.95e-07!9;UBERON:0004016!2.95e-07!9;UBERON:0010083!2.95e-07!9;UBERON:0007625!4.03e-07!11;UBERON:0005085!6.68e-07!29 | |||
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|short_description=p5@ZIC1 | |short_description=p5@ZIC1 | ||
}} | }} |
Latest revision as of 19:24, 15 September 2015
Short description: | p5@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZIC1_5end |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | -1bp_to_ENST00000474034_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 6.93e-16 | 5 |
oligodendrocyte | 9.71e-11 | 7 |
macroglial cell | 9.71e-11 | 7 |
astrocyte | 9.71e-11 | 7 |
oligodendrocyte precursor cell | 9.71e-11 | 7 |
astrocyte of the cerebellum | 1.20e-10 | 3 |
ciliated cell | 2.05e-10 | 3 |
ciliated epithelial cell | 2.05e-10 | 3 |
multi-ciliated epithelial cell | 2.05e-10 | 3 |
non-pigmented ciliary epithelial cell | 2.05e-10 | 3 |
hair follicle dermal papilla cell | 3.80e-10 | 3 |
stem cell of epidermis | 3.80e-10 | 3 |
leptomeningeal cell | 3.80e-10 | 3 |
smooth muscle cell of the brain vasculature | 4.04e-10 | 3 |
central nervous system pericyte | 6.90e-08 | 2 |
fibroblast of choroid plexus | 8.65e-08 | 2 |
crystallin accumulating cell | 1.34e-07 | 4 |
vertebrate lens cell | 1.34e-07 | 4 |
lens epithelial cell | 1.34e-07 | 4 |
outer root sheath cell | 1.97e-07 | 2 |