FFCP PHASE1:Hg19::chr19:1450095..1450102,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24036 | |||
|TSSclassifier=strong | |||
|UniProt=O95996,B5MDS5 | |||
|association_with_transcript=-45bp_to_ENST00000233607,ENST00000238483,NM_005883,uc002lsr.1,uc002lss.1_5end | |||
|cluster_id=chr19:1450095..1450102,+ | |||
|coexpression_cluster_id=C1367 | |||
|description=CAGE_peak_4_at_APC2_5end | |||
|id=chr19:1450095..1450102,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.57e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.76e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.72e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;2.37e-24;5!UBERON:0001950;1.93e-22;20!UBERON:0002619;1.79e-20;22!UBERON:0003528;1.64e-18;34!UBERON:0002020;1.64e-18;34!UBERON:0000956;4.36e-18;25!UBERON:0000203;4.36e-18;25!UBERON:0002791;1.61e-17;32!UBERON:0001869;1.61e-17;32!UBERON:0000941;4.72e-15;1!UBERON:0001785;4.72e-15;1!UBERON:0002464;4.72e-15;1!UBERON:0004904;4.72e-15;1!UBERON:0001021;4.72e-15;1!UBERON:0001893;1.38e-14;34!UBERON:0001016;5.63e-13;83!UBERON:0002780;3.94e-12;41!UBERON:0001890;3.94e-12;41!UBERON:0000955;6.57e-11;68!UBERON:0001017;1.03e-10;75!UBERON:0000073;6.70e-10;53!UBERON:0002616;6.70e-10;53!UBERON:0004732;8.15e-10;13!UBERON:0001871;1.56e-08;6!UBERON:0003714;3.56e-08;2!UBERON:0005162;3.56e-08;2!UBERON:0000122;3.56e-08;2!UBERON:0002148;7.03e-08;2!UBERON:0001875;7.03e-08;2!UBERON:0006331;7.03e-08;2!UBERON:0009662;7.03e-08;2!UBERON:0006514;7.03e-08;2!UBERON:0002680;9.37e-07;9!UBERON:0000125;9.37e-07;9!UBERON:0002308;9.37e-07;9!UBERON:0001895;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.14e-26,89;UBERON:0001017,2.08e-25,81;UBERON:0002021,3.13e-24,5;UBERON:0003528,2.60e-23,34;UBERON:0002020,2.60e-23,34;UBERON:0001950,2.05e-22,20;UBERON:0001049,5.11e-22,56;UBERON:0005068,5.11e-22,56;UBERON:0006241,5.11e-22,56;UBERON:0007135,5.11e-22,56;UBERON:0002619,1.89e-20,22;UBERON:0002791,4.53e-19,32;UBERON:0001869,4.53e-19,32;UBERON:0000073,7.99e-19,53;UBERON:0002616,7.99e-19,53;UBERON:0000956,4.57e-18,25;UBERON:0000203,4.57e-18,25;UBERON:0003075,4.84e-18,82;UBERON:0007284,4.84e-18,82;UBERON:0001893,5.91e-18,34;UBERON:0000955,8.91e-18,68;UBERON:0006238,8.91e-18,68;UBERON:0002346,3.72e-17,86;UBERON:0000941,4.73e-15,1;UBERON:0001785,4.73e-15,1;UBERON:0002464,4.73e-15,1;UBERON:0004904,4.73e-15,1;UBERON:0001021,4.73e-15,1;UBERON:0003902,4.73e-15,1;UBERON:0005425,4.73e-15,1;UBERON:0002780,6.99e-15,41;UBERON:0001890,6.99e-15,41;UBERON:0003080,6.99e-15,41;UBERON:0006240,6.99e-15,41;UBERON:0010371,5.30e-14,104;UBERON:0004121,2.10e-13,171;UBERON:0000924,2.10e-13,171;UBERON:0006601,2.10e-13,171;UBERON:0003056,6.07e-13,61;UBERON:0011216,1.32e-11,223;UBERON:0010314,8.79e-11,132;UBERON:0004732,7.91e-10,13;UBERON:0001871,1.42e-08,6;UBERON:0003076,1.60e-08,15;UBERON:0003057,1.60e-08,15;UBERON:0003714,3.56e-08,2;UBERON:0005162,3.56e-08,2;UBERON:0000122,3.56e-08,2;UBERON:0002148,8.04e-08,2;UBERON:0006331,8.04e-08,2;UBERON:0009662,8.04e-08,2;UBERON:0001875,8.60e-08,2;UBERON:0006514,8.60e-08,2;UBERON:0002680,9.10e-07,9;UBERON:0001895,9.10e-07,9;UBERON:0010092,9.10e-07,9 | |||
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|short_description=p4@APC2 | |||
}} |
Latest revision as of 04:42, 16 September 2015
Short description: | p4@APC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APC2_5end |
Coexpression cluster: | C1367_optic_extraskeletal_brain_rhabdomyosarcoma_substantia_corpus_thalamus |
Association with transcript: | -45bp_to_ENST00000233607, ENST00000238483, NM_005883, uc002lsr.1, uc002lss.1_5end |
EntrezGene: | APC2 |
HGNC: | 24036 |
UniProt: | O95996B5MDS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.76e-07 | 8 |