FFCP PHASE1:Hg19::chr1:154540261..154540288,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1962 | |||
|TSSclassifier=strong | |||
|UniProt=P17787,Q5SXY3 | |||
|association_with_transcript=4bp_to_ENST00000368476,NM_000748,uc001ffg.2_5end | |||
|cluster_id=chr1:154540261..154540288,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CHRNB2_5end | |||
|id=chr1:154540261..154540288,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.09e-08!8;CL:0002319!2.21e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.72e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-20;82!UBERON:0006215;5.21e-08;3 | |||
|ontology_enrichment_disease=DOID:171!2.01e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:169;3.37e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.16e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.81e-52;32!UBERON:0002780;6.00e-52;41!UBERON:0001890;6.00e-52;41!UBERON:0001893;1.74e-50;34!UBERON:0003528;9.82e-50;34!UBERON:0002020;9.82e-50;34!UBERON:0002619;1.66e-49;22!UBERON:0000073;1.56e-48;53!UBERON:0002616;1.56e-48;53!UBERON:0002791;1.88e-48;32!UBERON:0001950;5.01e-45;20!UBERON:0000956;5.08e-43;25!UBERON:0000203;5.08e-43;25!UBERON:0000955;6.01e-37;68!UBERON:0001017;2.28e-36;75!UBERON:0001016;4.99e-32;83!UBERON:0002420;2.65e-16;9!UBERON:0007245;2.65e-16;9!UBERON:0010009;2.65e-16;9!UBERON:0010011;2.65e-16;9!UBERON:0000454;2.65e-16;9!UBERON:0000125;5.31e-16;9!UBERON:0002308;5.31e-16;9!UBERON:0001894;5.55e-16;7!UBERON:0000200;2.92e-15;6!UBERON:0004733;1.61e-14;12!UBERON:0002028;1.61e-14;12!UBERON:0002298;1.21e-13;6!UBERON:0002021;1.86e-13;5!UBERON:0004732;2.89e-13;13!UBERON:0001872;6.00e-13;5!UBERON:0001871;6.25e-13;6!UBERON:0000349;8.92e-13;5!UBERON:0007023;1.94e-12;114!UBERON:0009663;4.03e-12;7!UBERON:0011216;6.24e-12;132!UBERON:0000369;1.53e-10;4!UBERON:0002435;1.53e-10;4!UBERON:0000204;1.53e-10;4!UBERON:0002784;4.89e-10;4!UBERON:0003296;5.58e-10;4!UBERON:0010133;5.58e-10;4!UBERON:0002680;2.36e-09;9!UBERON:0001895;2.36e-09;9!UBERON:0001870;2.55e-08;3!UBERON:0005383;4.18e-08;3!UBERON:0005382;4.18e-08;3!UBERON:0000988;4.44e-08;3!UBERON:0010314;2.09e-07;132!UBERON:0001896;3.04e-07;3!UBERON:0005290;3.04e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,14.3153839243384,7.73288812777695,10.7210409813983,7.65526501983796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9297717731956,6.33012373847307,0,0,0.211125408127993,0.19924798825107,0,10.3292426620253,0,0,0,0,0,0,0,0,0,16.4786566836187,13.729678527954,19.9613798001194,0,0,0,0.1137934482855,0,0.236387681767936,12.0660180634513,2.33283690706603,6.59774980746511,7.08593108651071,7.71817207202611,3.05163472634166,8.18286523491062,13.0040952339561,12.5049676377764,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,3.16785325009182,0,10.5419000576403,0,0,0,0,0,14.0793470350025,0.31593289814244,0,0,0,0,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,4.51961481561065,0.137041924646751,0,15.3212126213226,0,0,0,0,0,0,9.60931988027002,0,0,0,0,0,0,0,6.60462317580768,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6998234859954,5.5843396505746,0.482259445395058,0.550157746388935,0,0,0,18.7108634506716,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,7.11056259988528,3.57028024705263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,10.6328181596038,14.7651780531375,6.25954653532499,1.72022758707021,1.66393577305278,7.8862431735557,3.04366996859708,0,0,0.570930667089935,0,9.83503302194451,16.8108393188557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0.256241518587947,0,0,5.80685431837269,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,10.6152328182031,27.1718524719638,0.157265941855896,7.97230358801702,0.169732529954025,1.48802444071178,0.123935764259002,0,0,0,20.0142687071367,0,0,15.3507847980538,22.6714522120936,3.99084647642878,14.3581454968529,14.1160149884162,23.790094847691,11.6262464854933,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,18.2351478469666,8.59185908475232,5.78723030203315,17.8832584746817,9.29857175330973,0,0,0.351742488719241,0,13.9282477328355,10.4247953887835,2.42786241694653,5.69155478378244,0,0,0,17.8760397729067,20.7184236722975,0,0.111231401892069,0.078493092850514,11.1552068840361,0,0.913158720509496,0,0,4.50302228312935,7.58465336317088,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,5.14666819616632,11.5391449593594,0.118920090777569,0,7.69583617218004,5.1327366812669,0,0.437119121007915,7.52507674178437,0,11.312474260878,3.33724394095407,0.594092800654172,4.6492130034174,0,0,0,0,0,0,0,0,0,0,0.315543124386369,21.55330239052,12.6541700198709,1.0580536810308,0,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,0,0,6.63335551567024,2.0686599172379,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CHRNB2 | |||
}} |
Latest revision as of 09:38, 17 September 2015
Short description: | p2@CHRNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHRNB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 4bp_to_ENST00000368476, NM_000748, uc001ffg.2_5end |
EntrezGene: | CHRNB2 |
HGNC: | 1962 |
UniProt: | P17787Q5SXY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.72e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.16e-07 | 6 |