FFCP PHASE1:Hg19::chr3:184056614..184056641,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131408 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28308 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000453072_5end | |||
|cluster_id=chr3:184056614..184056641,+ | |||
|coexpression_cluster_id=C1146 | |||
|description=CAGE_peak_3_at_FAM131A_5end | |||
|id=chr3:184056614..184056641,+ | |||
|ontology_enrichment_celltype=CL:0000393!7.15e-09!60;CL:0000211!7.15e-09!60;CL:0000192!1.47e-08!42;CL:0000514!1.47e-08!42;CL:0000183!3.88e-08!59;CL:0000359!5.76e-08!32;CL:0000187!7.75e-08!54;CL:0000680!6.57e-07!57;CL:0000056!6.57e-07!57;CL:0000355!6.57e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.35e-12;32!CL:0000192;3.09e-09;43!CL:0002595;9.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.05e-13,32;CL:0000192,1.99e-11,43;CL:0000514,1.99e-11,43;CL:0000393,9.63e-10,61;CL:0000211,9.63e-10,61;CL:0000187,6.38e-08,55;CL:0000680,2.77e-07,58;CL:0000056,2.77e-07,58;CL:0000355,2.77e-07,58;CL:0002539,9.82e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-13;82!CL:0000514;3.09e-09;43!UBERON:0006215;3.78e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-42!57;UBERON:0005068!2.91e-42!57;UBERON:0006241!2.91e-42!57;UBERON:0007135!2.91e-42!57;UBERON:0001017!7.02e-42!82;UBERON:0005743!5.73e-40!86;UBERON:0000073!7.89e-40!94;UBERON:0001016!7.89e-40!94;UBERON:0002616!4.51e-39!59;UBERON:0000955!4.62e-36!69;UBERON:0006238!4.62e-36!69;UBERON:0002346!5.97e-35!90;UBERON:0003075!1.35e-34!86;UBERON:0007284!1.35e-34!86;UBERON:0002780!4.88e-33!41;UBERON:0001890!4.88e-33!41;UBERON:0006240!4.88e-33!41;UBERON:0003080!8.29e-32!42;UBERON:0007023!3.96e-28!115;UBERON:0000025!9.55e-28!194;UBERON:0003056!1.10e-27!61;UBERON:0001893!6.13e-27!34;UBERON:0002020!7.10e-27!34;UBERON:0003528!7.10e-27!34;UBERON:0001869!2.92e-26!32;UBERON:0000924!3.49e-26!173;UBERON:0006601!3.49e-26!173;UBERON:0002791!4.26e-26!33;UBERON:0004121!1.60e-25!169;UBERON:0000033!7.84e-25!123;UBERON:0004111!8.67e-25!241;UBERON:0000153!1.21e-24!129;UBERON:0007811!1.21e-24!129;UBERON:0000477!5.43e-23!286;UBERON:0000483!1.33e-22!309;UBERON:0000119!6.60e-22!312;UBERON:0000956!3.14e-20!25;UBERON:0000203!3.14e-20!25;UBERON:0002619!1.26e-18!22;UBERON:0000922!3.53e-18!612;UBERON:0001950!4.52e-17!20;UBERON:0002050!5.54e-17!605;UBERON:0005423!5.54e-17!605;UBERON:0000475!9.56e-17!365;UBERON:0000923!1.71e-16!604;UBERON:0005291!1.71e-16!604;UBERON:0006598!1.71e-16!604;UBERON:0002532!1.71e-16!604;UBERON:0000481!1.24e-15!347;UBERON:0000468!2.91e-15!659;UBERON:0000480!8.36e-14!626;UBERON:0000467!1.49e-13!625;UBERON:0003076!2.49e-11!15;UBERON:0003057!2.49e-11!15;UBERON:0004732!4.69e-10!13;UBERON:0004733!2.20e-09!12;UBERON:0002028!2.20e-09!12;UBERON:0007277!2.20e-09!12;UBERON:0004573!6.20e-09!33;UBERON:0004571!6.20e-09!33;UBERON:0002420!2.67e-08!9;UBERON:0007245!2.67e-08!9;UBERON:0010009!2.67e-08!9;UBERON:0010011!2.67e-08!9;UBERON:0000454!2.67e-08!9;UBERON:0002308!4.58e-08!9;UBERON:0000125!4.58e-08!9;UBERON:0000064!1.17e-07!219;UBERON:0001637!1.55e-07!42;UBERON:0003509!1.55e-07!42;UBERON:0004572!1.55e-07!42;UBERON:0001894!1.73e-07!7;UBERON:0006222!1.73e-07!7;UBERON:0002680!2.82e-07!9;UBERON:0001895!2.82e-07!9;UBERON:0010092!2.82e-07!9;UBERON:0002385!5.76e-07!63;UBERON:0001015!5.76e-07!63;UBERON:0000383!5.76e-07!63;UBERON:0000062!6.46e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.72e-44;41!UBERON:0001890;1.72e-44;41!UBERON:0001869;1.54e-43;32!UBERON:0003528;1.40e-42;34!UBERON:0002020;1.40e-42;34!UBERON:0001893;3.28e-42;34!UBERON:0002791;7.85e-41;32!UBERON:0000073;1.12e-40;53!UBERON:0002616;1.12e-40;53!UBERON:0002619;3.97e-40;22!UBERON:0000956;6.76e-38;25!UBERON:0000203;6.76e-38;25!UBERON:0001950;8.61e-37;20!UBERON:0000955;2.47e-28;68!UBERON:0001017;1.61e-26;75!UBERON:0001016;4.74e-23;83!UBERON:0001894;4.38e-15;7!UBERON:0004732;1.47e-13;13!UBERON:0000200;1.23e-12;6!UBERON:0004733;3.96e-12;12!UBERON:0002028;3.96e-12;12!UBERON:0002420;6.38e-12;9!UBERON:0007245;6.38e-12;9!UBERON:0010009;6.38e-12;9!UBERON:0010011;6.38e-12;9!UBERON:0000454;6.38e-12;9!UBERON:0000125;1.03e-11;9!UBERON:0002308;1.03e-11;9!UBERON:0002298;2.41e-11;6!UBERON:0001872;4.49e-11;5!UBERON:0002021;1.20e-10;5!UBERON:0001871;1.44e-10;6!UBERON:0000349;1.44e-10;5!UBERON:0007023;1.46e-10;114!UBERON:0000369;2.47e-10;4!UBERON:0002435;2.47e-10;4!UBERON:0000204;2.47e-10;4!UBERON:0004573;1.48e-09;33!UBERON:0004571;1.48e-09;33!UBERON:0003296;2.99e-09;4!UBERON:0010133;2.99e-09;4!UBERON:0011216;4.10e-09;132!UBERON:0002784;7.10e-09;4!UBERON:0009663;1.46e-08;7!UBERON:0005383;3.32e-08;3!UBERON:0005382;3.32e-08;3!UBERON:0002680;6.19e-08;9!UBERON:0001895;6.19e-08;9!UBERON:0001870;1.29e-07;3!UBERON:0001637;2.30e-07;42!UBERON:0003509;2.30e-07;42!UBERON:0004572;2.30e-07;42!UBERON:0000988;7.85e-07;3!UBERON:0003834;9.12e-07;5!UBERON:0001533;9.12e-07;5!UBERON:0010314;9.52e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.95e-75,56;UBERON:0005068,9.95e-75,56;UBERON:0006241,9.95e-75,56;UBERON:0007135,9.95e-75,56;UBERON:0000073,5.20e-73,53;UBERON:0002616,5.20e-73,53;UBERON:0001017,1.70e-67,81;UBERON:0002780,4.65e-62,41;UBERON:0001890,4.65e-62,41;UBERON:0003080,4.65e-62,41;UBERON:0006240,4.65e-62,41;UBERON:0001016,1.56e-61,89;UBERON:0000955,7.97e-59,68;UBERON:0006238,7.97e-59,68;UBERON:0003075,7.72e-51,82;UBERON:0007284,7.72e-51,82;UBERON:0001869,9.00e-49,32;UBERON:0001893,1.35e-48,34;UBERON:0003528,1.83e-48,34;UBERON:0002020,1.83e-48,34;UBERON:0002346,8.44e-48,86;UBERON:0002791,3.30e-45,32;UBERON:0003056,1.53e-42,61;UBERON:0002619,1.41e-40,22;UBERON:0010371,1.75e-40,104;UBERON:0000956,3.50e-38,25;UBERON:0000203,3.50e-38,25;UBERON:0001950,4.48e-37,20;UBERON:0000025,3.94e-34,192;UBERON:0010314,2.72e-30,132;UBERON:0007023,5.60e-30,114;UBERON:0004121,4.64e-28,171;UBERON:0000924,4.64e-28,171;UBERON:0006601,4.64e-28,171;UBERON:0011216,6.77e-27,223;UBERON:0004111,1.35e-24,240;UBERON:0000483,3.92e-19,306;UBERON:0000119,9.23e-19,309;UBERON:0001894,8.36e-15,7;UBERON:0006222,8.36e-15,7;UBERON:0003076,6.94e-14,15;UBERON:0003057,6.94e-14,15;UBERON:0004732,1.48e-13,13;UBERON:0000200,9.33e-13,6;UBERON:0004733,3.93e-12,12;UBERON:0002028,3.93e-12,12;UBERON:0007277,3.93e-12,12;UBERON:0002420,4.63e-12,9;UBERON:0007245,4.63e-12,9;UBERON:0010009,4.63e-12,9;UBERON:0010011,4.63e-12,9;UBERON:0000454,4.63e-12,9;UBERON:0000125,1.27e-11,9;UBERON:0002308,1.27e-11,9;UBERON:0002298,2.22e-11,6;UBERON:0002050,2.31e-11,564;UBERON:0004573,3.05e-11,33;UBERON:0004571,3.05e-11,33;UBERON:0001872,4.84e-11,5;UBERON:0000923,5.38e-11,560;UBERON:0010316,5.38e-11,560;UBERON:0005291,5.38e-11,560;UBERON:0006598,5.38e-11,560;UBERON:0010317,5.38e-11,560;UBERON:0002532,5.38e-11,560;UBERON:0000349,6.62e-11,5;UBERON:0001871,7.25e-11,6;UBERON:0002021,1.45e-10,5;UBERON:0001637,1.68e-10,42;UBERON:0003509,1.68e-10,42;UBERON:0004572,1.68e-10,42;UBERON:0005423,2.27e-10,581;UBERON:0000922,2.52e-10,592;UBERON:0000369,2.55e-10,4;UBERON:0002435,2.55e-10,4;UBERON:0000204,2.55e-10,4;UBERON:0010082,2.55e-10,4;UBERON:0003296,5.05e-09,4;UBERON:0010133,5.05e-09,4;UBERON:0009663,1.45e-08,7;UBERON:0002784,1.52e-08,4;UBERON:0005383,3.43e-08,3;UBERON:0005382,3.43e-08,3;UBERON:0002680,8.33e-08,9;UBERON:0001895,8.33e-08,9;UBERON:0010092,8.33e-08,9;UBERON:0001870,1.16e-07,3;UBERON:0004237,9.82e-07,10;UBERON:0004695,9.82e-07,10;UBERON:0002111,9.82e-07,10;UBERON:0004178,9.82e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0,0.61560529038394,0.408001382488506,0.313454721478088,0.85870796139317,0.547497700291537,1.25542639594803,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.263504357079378,1.24430121722827,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0.198762407366705,0,1.73570250803797,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.439001141634502,0,0.301586917234893,0.185176890317059,0.325808305310325,1.03993478527958,0,0.34779121492523,0,0,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,1.80863626235752,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81141936333695,5.20559415430487,2.31986643833309,3.01529277601828,1.91381625495949,0,0,0,0.36807447515742,1.50051156317903,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0.737476674166813,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0.802025881213139,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.773365746336976,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0,0.576570202095319,0.127612712494584,0.2023155617111,3.71876439437829,2.20368642781448,1.3940745403212,1.54016790088044,1.59691809095107,2.60979897622522,0.37064843820784,1.71749864090389,0,0.316379424718726,0,0.255897791311334,0,1.27281299170375,2.35484592059769,0,0,0,0.606547444719948,1.58510321173008,1.26377536871694,0,0.487426979262569,1.05650146756755,0.272999822815972,0.424216295861138,0,3.30819206127675,1.32687795048244,3.5076070820301,1.73632660280006,1.31178950409327,0,1.8589409885985,1.69017361519345,0,0.0982490410131212,0,0.709522128141196,0.633322905892992,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,4.07941307590487,0,0,1.26675244876796,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,4.36010061360701,7.98455192004777,0,0,0,0,0,0,1.72371686620732,0.874813840149763,0,11.5146380155799,7.47697919477529,1.52581736317083,3.09621927807429,5.02430952221031,3.07139556015562,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,3.66618086960175,0,0,0,1.41542379259422,0.802577647298789,4.68528891450678,0,0,0,1.57833761139756,0,3.67287313956588,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0.264768380074501,1.35588444468319,0,0,3.92526934926448,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.669514372325618,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,1.77064427945048,0,0.137539436597234,0,0,0.77380195455795,4.6777158626679,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.30634944043764,0,0,0,0,0,0,2.19781025814636,1.3223260174269,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,6.2024772597689,2.56255156294123,3.254964198369,1.14681839138014,1.99672292766334,1.8628920882415,0,0.249960815924213,0,0,0,0.468334905806882,1.44921028610825,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0.63718706865481,0,1.08684069813382,1.24411862352257,0.53168342911599,0.521745061811734,0.601030435988874,0,0.813741466409323,0.909243296012797,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0.76736622782191,0.754773679776773,0,0.436838552768056,0,0.425149840203366,0.123935764259002,0,0.954013051960256,0,8.0057074828547,0,0,6.35869328454949,1.41696576325585,2.23487402680012,3.48697819209284,2.26864526599546,4.08027789538886,5.49017195148294,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,2.70150338473579,2.34323429584154,2.27355476151302,3.29762213008315,4.37579847214576,0,0.496211178389294,0.527613733078862,0,3.21421101526972,1.00885116665647,4.85572483389305,7.74051450594412,0,0,0,3.12660771693426,3.22286590457961,0,0,0.078493092850514,11.6265536537841,0,0.913158720509496,0,0,0.929195074296532,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.45713297917742,2.10545517115895,0,0,0,0.439762066981716,3.62310824560016,0.154348316215889,0.218559560503957,0,0.735444965261716,0,1.96308467114945,0.891139200981258,1.2679671827502,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,6.73115752890055,4.36350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.227336094654718,0,4.1458471972939,2.0686599172379,0.213233981900981,0.714193294391221,0,0.372448285775147,0.112131862580613,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0.134704106029175,1.07583308089015,1.33064142618405,0,0,0,0,0,0.122241444182866,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p3@FAM131A | |||
}} |
Latest revision as of 02:14, 17 September 2015
Short description: | p3@FAM131A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM131A_5end |
Coexpression cluster: | C1146_pineal_putamen_caudate_cerebellum_nucleus_insula_pituitary |
Association with transcript: | 0bp_to_ENST00000453072_5end |
EntrezGene: | FAM131A |
HGNC: | 28308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.05e-13 | 32 |
smooth muscle cell | 1.99e-11 | 43 |
smooth muscle myoblast | 1.99e-11 | 43 |
electrically responsive cell | 9.63e-10 | 61 |
electrically active cell | 9.63e-10 | 61 |
muscle cell | 6.38e-08 | 55 |
muscle precursor cell | 2.77e-07 | 58 |
myoblast | 2.77e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.77e-07 | 58 |
aortic smooth muscle cell | 9.82e-07 | 10 |