FFCP PHASE1:Hg19::chr5:71503633..71503644,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-83bp_to_BC047027_5end | |||
|cluster_id=chr5:71503633..71503644,+ | |||
|coexpression_cluster_id=C452 | |||
|description=CAGE_peak_2_at_BC047027_5end | |||
|id=chr5:71503633..71503644,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.71e-13;3!UBERON:0003057;4.71e-13;3!UBERON:0006601;2.75e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-40!57;UBERON:0005068!1.95e-40!57;UBERON:0006241!1.95e-40!57;UBERON:0007135!1.95e-40!57;UBERON:0000073!8.56e-37!94;UBERON:0001016!8.56e-37!94;UBERON:0001017!1.09e-35!82;UBERON:0000955!1.28e-35!69;UBERON:0006238!1.28e-35!69;UBERON:0005743!4.75e-35!86;UBERON:0002616!1.45e-32!59;UBERON:0003075!4.60e-32!86;UBERON:0007284!4.60e-32!86;UBERON:0003080!9.46e-31!42;UBERON:0002780!6.34e-30!41;UBERON:0001890!6.34e-30!41;UBERON:0006240!6.34e-30!41;UBERON:0002346!1.54e-29!90;UBERON:0002020!2.68e-28!34;UBERON:0003528!2.68e-28!34;UBERON:0001893!1.79e-27!34;UBERON:0002791!1.22e-26!33;UBERON:0001869!2.54e-26!32;UBERON:0003056!2.65e-24!61;UBERON:0007023!2.43e-21!115;UBERON:0000033!3.42e-21!123;UBERON:0000956!1.42e-20!25;UBERON:0000203!1.42e-20!25;UBERON:0000153!7.83e-20!129;UBERON:0007811!7.83e-20!129;UBERON:0000025!2.20e-19!194;UBERON:0002619!1.81e-18!22;UBERON:0004121!1.33e-17!169;UBERON:0000924!1.40e-16!173;UBERON:0006601!1.40e-16!173;UBERON:0001950!2.24e-16!20;UBERON:0000483!4.37e-16!309;UBERON:0000475!9.75e-16!365;UBERON:0000119!1.44e-15!312;UBERON:0004111!1.90e-13!241;UBERON:0000477!6.08e-12!286;UBERON:0003076!1.29e-10!15;UBERON:0003057!1.29e-10!15;UBERON:0000481!6.00e-10!347;UBERON:0002420!3.22e-09!9;UBERON:0007245!3.22e-09!9;UBERON:0010009!3.22e-09!9;UBERON:0010011!3.22e-09!9;UBERON:0000454!3.22e-09!9;UBERON:0002308!3.70e-09!9;UBERON:0000125!3.70e-09!9;UBERON:0002298!6.94e-09!8;UBERON:0004732!7.10e-09!13;UBERON:0004733!6.66e-08!12;UBERON:0002028!6.66e-08!12;UBERON:0007277!6.66e-08!12;UBERON:0009663!3.80e-07!7;UBERON:0000200!4.34e-07!6;UBERON:0001871!5.72e-07!7;UBERON:0000468!7.77e-07!659;UBERON:0000467!8.17e-07!625;UBERON:0000480!9.96e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.19e-39;22!UBERON:0000956;2.83e-34;25!UBERON:0000203;2.83e-34;25!UBERON:0001950;4.73e-32;20!UBERON:0000073;3.77e-31;53!UBERON:0002616;3.77e-31;53!UBERON:0003528;3.28e-30;34!UBERON:0002020;3.28e-30;34!UBERON:0001869;3.58e-27;32!UBERON:0002791;1.94e-26;32!UBERON:0002780;1.67e-25;41!UBERON:0001890;1.67e-25;41!UBERON:0002298;1.74e-24;6!UBERON:0004732;3.34e-24;13!UBERON:0001893;9.45e-23;34!UBERON:0001017;4.04e-22;75!UBERON:0000955;8.58e-22;68!UBERON:0004733;1.28e-20;12!UBERON:0002028;1.28e-20;12!UBERON:0001016;2.26e-20;83!UBERON:0002784;7.07e-17;4!UBERON:0001871;1.32e-15;6!UBERON:0000349;1.08e-14;5!UBERON:0000988;2.98e-13;3!UBERON:0002240;4.71e-13;3!UBERON:0005174;4.71e-13;3!UBERON:0001137;4.71e-13;3!UBERON:0001896;5.44e-13;3!UBERON:0005290;5.44e-13;3!UBERON:0000200;1.08e-11;6!UBERON:0002680;3.49e-11;9!UBERON:0001895;3.49e-11;9!UBERON:0001954;4.18e-10;2!UBERON:0003022;4.18e-10;2!UBERON:0002421;4.18e-10;2!UBERON:0002600;4.18e-10;2!UBERON:0001876;5.67e-10;2!UBERON:0002771;1.04e-09;2!UBERON:0002148;1.04e-09;2!UBERON:0006331;1.04e-09;2!UBERON:0009662;1.04e-09;2!UBERON:0001894;1.10e-09;7!UBERON:0002702;1.66e-09;2!UBERON:0001905;1.92e-09;2!UBERON:0002757;1.92e-09;2!UBERON:0010134;1.92e-09;2!UBERON:0005408;1.92e-09;2!UBERON:0001899;1.92e-09;2!UBERON:0001897;3.76e-09;2!UBERON:0010225;3.76e-09;2!UBERON:0007023;3.88e-09;114!UBERON:0001872;1.99e-08;5!UBERON:0002021;2.72e-08;5!UBERON:0011216;3.50e-08;132!UBERON:0010314;6.98e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.78e-64,56;UBERON:0005068,5.78e-64,56;UBERON:0006241,5.78e-64,56;UBERON:0007135,5.78e-64,56;UBERON:0000073,7.73e-55,53;UBERON:0002616,7.73e-55,53;UBERON:0001017,8.32e-51,81;UBERON:0001016,3.53e-48,89;UBERON:0000955,3.42e-47,68;UBERON:0006238,3.42e-47,68;UBERON:0003075,9.90e-45,82;UBERON:0007284,9.90e-45,82;UBERON:0002346,2.53e-42,86;UBERON:0002619,3.48e-39,22;UBERON:0002780,4.76e-36,41;UBERON:0001890,4.76e-36,41;UBERON:0003080,4.76e-36,41;UBERON:0006240,4.76e-36,41;UBERON:0003528,6.57e-36,34;UBERON:0002020,6.57e-36,34;UBERON:0000956,3.06e-34,25;UBERON:0000203,3.06e-34,25;UBERON:0010371,9.27e-34,104;UBERON:0010314,6.60e-33,132;UBERON:0007023,3.08e-32,114;UBERON:0001950,5.41e-32,20;UBERON:0003076,8.67e-31,15;UBERON:0003057,8.67e-31,15;UBERON:0002791,5.77e-30,32;UBERON:0001869,5.77e-30,32;UBERON:0001893,5.00e-28,34;UBERON:0003056,1.91e-25,61;UBERON:0002298,2.58e-24,6;UBERON:0004732,3.13e-24,13;UBERON:0000025,8.25e-23,192;UBERON:0004121,1.18e-21,171;UBERON:0000924,1.18e-21,171;UBERON:0006601,1.18e-21,171;UBERON:0004733,1.20e-20,12;UBERON:0002028,1.20e-20,12;UBERON:0007277,1.20e-20,12;UBERON:0004111,9.25e-18,240;UBERON:0011216,3.74e-17,223;UBERON:0002784,1.07e-16,4;UBERON:0001871,1.51e-15,6;UBERON:0000349,1.05e-14,5;UBERON:0000483,4.92e-14,306;UBERON:0000119,8.21e-14,309;UBERON:0000988,4.16e-13,3;UBERON:0001896,5.80e-13,3;UBERON:0005290,5.80e-13,3;UBERON:0010096,5.80e-13,3;UBERON:0002240,6.56e-13,3;UBERON:0005174,6.56e-13,3;UBERON:0001137,6.56e-13,3;UBERON:0000200,1.09e-11,6;UBERON:0002680,3.20e-11,9;UBERON:0001895,3.20e-11,9;UBERON:0010092,3.20e-11,9;UBERON:0001954,3.83e-10,2;UBERON:0003022,3.83e-10,2;UBERON:0002421,3.83e-10,2;UBERON:0002600,3.83e-10,2;UBERON:0001876,5.93e-10,2;UBERON:0002148,1.09e-09,2;UBERON:0006331,1.09e-09,2;UBERON:0009662,1.09e-09,2;UBERON:0002771,1.18e-09,2;UBERON:0001894,1.38e-09,7;UBERON:0006222,1.38e-09,7;UBERON:0002702,1.46e-09,2;UBERON:0001905,1.89e-09,2;UBERON:0002757,1.89e-09,2;UBERON:0010134,1.89e-09,2;UBERON:0005408,1.89e-09,2;UBERON:0001899,1.89e-09,2;UBERON:0001897,5.79e-09,2;UBERON:0010225,5.79e-09,2;UBERON:0001872,2.31e-08,5;UBERON:0002021,2.55e-08,5;UBERON:0000923,6.78e-07,560;UBERON:0010316,6.78e-07,560;UBERON:0005291,6.78e-07,560;UBERON:0006598,6.78e-07,560;UBERON:0010317,6.78e-07,560;UBERON:0002532,6.78e-07,560;UBERON:0002050,8.90e-07,564 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,0,0.123121058076788,0,0,0.85870796139317,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0,0.340296549480063,0.538168907066586,0,0,0,0.206105058476878,0,0.18611685633159,0.506328996723799,0.194874010322397,0.504867548488229,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.939269553886573,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,0.535286966391485,0,2.57711112983969,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,2.37507507712353,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0.137836572484531,0.429680979473094,0.290033387828457,0.511359764496605,0.356128142586949,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,1.28381696410176,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,5.96488588659779,5.06409899077846,0.111308705022906,0,0,1.19548792950642,0,0,0.306806047506464,0,0.933118762985422,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,1.48428957058962,1.99613798001194,0,0,0.724999575434793,0,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.844175070377856,1.52581736317083,0.774054819518572,1.77328571372128,1.97446857438575,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0.202203398942031,0,0.937057782901357,0,0,0,0.394584402849391,0,4.59109142445735,0.126373159256976,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.633107959558787,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0.288950589901519,3.60252173225874,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0,0,11.1332156573302,5.99294986890933,0,0.137539436597234,0,0,0,0.546746009922222,0,0,0.0524545881349981,0.105600336519406,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,8.53267511986234,2.24795422962573,0.855434189421647,0,0.320362237703084,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,3.54427271986794,2.07444650333337,3.6305369904885,6.30750115259078,1.33114861844223,1.36612086471044,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0.57785949122191,0,0,0.226705925512272,0,0.734210113519403,0.358177682162975,0,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,8.43376460525558,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.383683113910955,0.323474434190045,0,0.436838552768056,0,0,0,0,0.318004350653419,0,0,0,0,0.385375350578757,0,4.94864963077169,2.2562800066483,4.78936222821264,0.622415272177961,4.03689114079628,5.71077681036618,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.742913430802341,5.46754669029693,4.34042272652487,0.634158101939068,3.28184885410932,0,0,0,0,6.96412386641773,1.3451348888753,0,0,0.0887023701626388,0,0,1.15548546060614,0.460409414939944,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.301925687133347,0,0,0,1.22574160876953,0,3.33724394095407,1.18818560130834,3.3812458206672,0.169927114687817,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0.573358332605805,0,0.339957450954573,4.79985759374415,0,0,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0.250707539292375,0.151557396436479,0.267964130156178,3.31667775783512,1.13776295448085,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,3.8614456457388,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p2@BC047027 | |||
}} |
Latest revision as of 16:09, 30 July 2015
Short description: | p2@BC047027 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC047027_5end |
Coexpression cluster: | C452_hippocampus_locus_middle_pineal_occipital_thalamus_cerebral |
Association with transcript: | -83bp_to_BC047027_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data