FFCP PHASE1:Hg19::chr6:158733491..158733502,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15530 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRJ4 | |||
|association_with_transcript=-189bp_to_ENST00000367094,ENST00000367097,NM_001007466,NM_020245,uc003qrf.2,uc003qrg.2,uc011efo.1_5end | |||
|cluster_id=chr6:158733491..158733502,+ | |||
|coexpression_cluster_id=C452 | |||
|description=CAGE_peak_5_at_TULP4_5end | |||
|id=chr6:158733491..158733502,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.51e-14;2!UBERON:0006215;9.78e-10;3!UBERON:0006601;4.68e-08;82!UBERON:0010226;6.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.58e-59!57;UBERON:0005068!5.58e-59!57;UBERON:0006241!5.58e-59!57;UBERON:0007135!5.58e-59!57;UBERON:0000955!2.83e-54!69;UBERON:0006238!2.83e-54!69;UBERON:0002616!1.13e-53!59;UBERON:0001017!2.78e-52!82;UBERON:0003080!6.37e-50!42;UBERON:0005743!4.22e-49!86;UBERON:0002780!2.80e-48!41;UBERON:0001890!2.80e-48!41;UBERON:0006240!2.80e-48!41;UBERON:0007023!5.62e-45!115;UBERON:0000073!1.14e-44!94;UBERON:0001016!1.14e-44!94;UBERON:0003075!3.41e-41!86;UBERON:0007284!3.41e-41!86;UBERON:0002020!9.90e-41!34;UBERON:0003528!9.90e-41!34;UBERON:0002346!2.14e-40!90;UBERON:0001893!9.31e-40!34;UBERON:0002791!1.17e-38!33;UBERON:0001869!4.70e-37!32;UBERON:0003056!2.58e-36!61;UBERON:0000033!1.62e-31!123;UBERON:0002619!6.19e-31!22;UBERON:0000153!1.01e-30!129;UBERON:0007811!1.01e-30!129;UBERON:0001950!2.31e-27!20;UBERON:0000956!1.41e-26!25;UBERON:0000203!1.41e-26!25;UBERON:0000924!2.10e-23!173;UBERON:0006601!2.10e-23!173;UBERON:0004121!2.35e-23!169;UBERON:0002308!5.80e-16!9;UBERON:0000125!5.80e-16!9;UBERON:0002420!6.34e-16!9;UBERON:0007245!6.34e-16!9;UBERON:0010009!6.34e-16!9;UBERON:0010011!6.34e-16!9;UBERON:0000454!6.34e-16!9;UBERON:0002298!1.39e-13!8;UBERON:0009663!1.44e-12!7;UBERON:0000025!1.21e-11!194;UBERON:0004111!3.76e-11!241;UBERON:0001871!4.18e-11!7;UBERON:0004733!4.87e-11!12;UBERON:0002028!4.87e-11!12;UBERON:0007277!4.87e-11!12;UBERON:0000477!1.23e-10!286;UBERON:0003076!1.51e-10!15;UBERON:0003057!1.51e-10!15;UBERON:0004732!4.96e-10!13;UBERON:0001894!9.12e-10!7;UBERON:0006222!9.12e-10!7;UBERON:0000475!9.60e-10!365;UBERON:0000349!1.27e-09!5;UBERON:0002021!1.46e-09!5;UBERON:0001872!2.20e-09!5;UBERON:0000483!1.30e-08!309;UBERON:0000481!1.37e-08!347;UBERON:0000119!2.23e-08!312;UBERON:0003296!2.67e-08!4;UBERON:0010133!2.67e-08!4;UBERON:0000369!8.80e-08!4;UBERON:0002435!8.80e-08!4;UBERON:0000204!8.80e-08!4;UBERON:0010082!8.80e-08!4;UBERON:0000200!1.99e-07!6;UBERON:0002680!5.98e-07!9;UBERON:0001895!5.98e-07!9;UBERON:0010092!5.98e-07!9;UBERON:0002771!6.59e-07!3;UBERON:0000062!8.10e-07!511;UBERON:0005383!8.44e-07!3;UBERON:0005382!8.44e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.37e-35;34!UBERON:0002020;2.37e-35;34!UBERON:0001869;5.06e-34;32!UBERON:0002619;1.79e-33;22!UBERON:0002791;6.35e-33;32!UBERON:0002780;2.89e-31;41!UBERON:0001890;2.89e-31;41!UBERON:0000956;2.19e-29;25!UBERON:0000203;2.19e-29;25!UBERON:0001893;9.11e-29;34!UBERON:0001950;1.33e-24;20!UBERON:0000073;1.84e-21;53!UBERON:0002616;1.84e-21;53!UBERON:0000955;3.51e-17;68!UBERON:0001017;4.32e-17;75!UBERON:0002784;4.09e-16;4!UBERON:0002771;1.51e-14;2!UBERON:0001905;1.51e-14;2!UBERON:0001873;1.51e-14;2!UBERON:0001954;1.51e-14;2!UBERON:0002757;1.51e-14;2!UBERON:0010134;1.51e-14;2!UBERON:0003022;1.51e-14;2!UBERON:0005408;1.51e-14;2!UBERON:0002421;1.51e-14;2!UBERON:0001899;1.51e-14;2!UBERON:0002600;1.51e-14;2!UBERON:0001016;1.03e-12;83!UBERON:0002021;1.14e-12;5!UBERON:0000349;1.14e-12;5!UBERON:0000125;1.78e-12;9!UBERON:0002308;1.78e-12;9!UBERON:0002420;2.66e-12;9!UBERON:0007245;2.66e-12;9!UBERON:0010009;2.66e-12;9!UBERON:0010011;2.66e-12;9!UBERON:0000454;2.66e-12;9!UBERON:0000200;1.21e-10;6!UBERON:0005383;5.35e-10;3!UBERON:0005382;5.35e-10;3!UBERON:0001894;2.00e-09;7!UBERON:0009663;2.09e-09;7!UBERON:0001871;3.43e-09;6!UBERON:0011216;1.89e-08;132!UBERON:0002084;6.40e-08;1!UBERON:0003112;6.40e-08;1!UBERON:0011158;6.40e-08;1!UBERON:0002082;6.40e-08;1!UBERON:0003128;6.40e-08;1!UBERON:0001703;6.40e-08;1!UBERON:0002241;6.40e-08;1!UBERON:0000369;1.05e-07;4!UBERON:0002435;1.05e-07;4!UBERON:0003296;1.05e-07;4!UBERON:0010133;1.05e-07;4!UBERON:0000204;1.05e-07;4!UBERON:0007023;2.47e-07;114!UBERON:0002680;3.01e-07;9!UBERON:0001895;3.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.57e-46,53;UBERON:0002616,5.57e-46,53;UBERON:0001049,2.34e-43,56;UBERON:0005068,2.34e-43,56;UBERON:0006241,2.34e-43,56;UBERON:0007135,2.34e-43,56;UBERON:0002780,4.07e-43,41;UBERON:0001890,4.07e-43,41;UBERON:0003080,4.07e-43,41;UBERON:0006240,4.07e-43,41;UBERON:0003528,2.13e-40,34;UBERON:0002020,2.13e-40,34;UBERON:0000955,2.11e-38,68;UBERON:0006238,2.11e-38,68;UBERON:0002791,2.71e-37,32;UBERON:0001869,2.71e-37,32;UBERON:0001017,4.09e-35,81;UBERON:0001893,5.23e-35,34;UBERON:0002619,3.05e-33,22;UBERON:0001016,2.87e-31,89;UBERON:0000956,3.49e-29,25;UBERON:0000203,3.49e-29,25;UBERON:0003075,1.49e-28,82;UBERON:0007284,1.49e-28,82;UBERON:0003056,4.01e-28,61;UBERON:0002346,4.64e-27,86;UBERON:0007023,1.69e-24,114;UBERON:0001950,2.34e-24,20;UBERON:0010314,2.25e-22,132;UBERON:0010371,9.58e-22,104;UBERON:0002784,4.11e-16,4;UBERON:0011216,2.71e-15,223;UBERON:0001873,8.49e-15,2;UBERON:0010122,8.49e-15,2;UBERON:0001954,1.20e-14,2;UBERON:0003022,1.20e-14,2;UBERON:0002421,1.20e-14,2;UBERON:0002600,1.20e-14,2;UBERON:0001905,1.47e-14,2;UBERON:0002757,1.47e-14,2;UBERON:0010134,1.47e-14,2;UBERON:0005408,1.47e-14,2;UBERON:0001899,1.47e-14,2;UBERON:0004121,1.61e-14,171;UBERON:0000924,1.61e-14,171;UBERON:0006601,1.61e-14,171;UBERON:0002771,2.06e-14,2;UBERON:0000349,1.19e-12,5;UBERON:0002021,1.40e-12,5;UBERON:0000125,1.52e-12,9;UBERON:0002308,1.52e-12,9;UBERON:0002420,2.37e-12,9;UBERON:0007245,2.37e-12,9;UBERON:0010009,2.37e-12,9;UBERON:0010011,2.37e-12,9;UBERON:0000454,2.37e-12,9;UBERON:0000025,2.67e-11,192;UBERON:0000200,1.75e-10,6;UBERON:0005383,3.65e-10,3;UBERON:0005382,3.65e-10,3;UBERON:0009663,1.64e-09,7;UBERON:0001894,2.01e-09,7;UBERON:0006222,2.01e-09,7;UBERON:0001871,4.42e-09,6;UBERON:0004111,3.17e-08,240;UBERON:0002084,3.58e-08,1;UBERON:0002082,3.58e-08,1;UBERON:0010226,3.58e-08,1;UBERON:0003112,5.40e-08,1;UBERON:0011158,5.40e-08,1;UBERON:0003128,5.40e-08,1;UBERON:0001703,5.40e-08,1;UBERON:0002241,5.40e-08,1;UBERON:0004761,5.40e-08,1;UBERON:0009617,5.40e-08,1;UBERON:0000369,7.87e-08,4;UBERON:0002435,7.87e-08,4;UBERON:0000204,7.87e-08,4;UBERON:0010082,7.87e-08,4;UBERON:0003296,1.03e-07,4;UBERON:0010133,1.03e-07,4;UBERON:0002680,3.43e-07,9;UBERON:0001895,3.43e-07,9;UBERON:0010092,3.43e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,1.94826728407911,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.834912883456661,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,2.77371808838438,1.52581736317083,1.3269511191747,0.295547618953547,1.97446857438575,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,3.00210144354895,0.547621515567972,0,0,0,0,0,0,0,0,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,2.38568906942791,1.77064427945048,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.66116300871345,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.34228891392159,1.251909307065,0.573409195690071,0.665574309221114,0.310482014706917,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,1.41696576325585,2.55414174491442,0.205116364240755,1.26035848110859,0.276629009856872,1.61475645631851,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0.261906694481422,0.327543835020193,0.147856086217045,0.0675375846183947,4.68646859168308,2.48024155801421,0.253663240775627,0.546974809018219,0,0,0.175871244359621,0,2.67850917939143,1.3451348888753,0.606965604236632,0.455324382702595,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.471346769748006,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.981542335574726,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,4.1458471972939,0.310298987585686,0,0.714193294391221,0,0,0,0.0636471582781649,1.21270313374932,0,0,0.134704106029175,0,1.66330178273007,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p5@TULP4 | |||
}} |
Latest revision as of 11:45, 16 September 2015
Short description: | p5@TULP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TULP4_5end |
Coexpression cluster: | C452_hippocampus_locus_middle_pineal_occipital_thalamus_cerebral |
Association with transcript: | -189bp_to_ENST00000367094, ENST00000367097, NM_001007466, NM_020245, uc003qrf.2, uc003qrg.2, uc011efo.1_5end |
EntrezGene: | TULP4 |
HGNC: | 15530 |
UniProt: | Q9NRJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data