FFCP PHASE1:Hg19::chr18:3845321..3845371,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:3845321..3845371,- to FFCP PHASE1:Hg19::chr18:3845321..3845371,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2I2,B7Z9Y4,O14490 | |UniProt=B7Z2I2,B7Z9Y4,O14490 | ||
|association_with_transcript=0bp_to_ENST00000400147,ENST00000484845,ENST00000539435,NM_001003809,NM_001242765,NM_001242766_5end | |||
|cluster_id=chr18:3845321..3845371,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_DLGAP1_5end | |||
|id=chr18:3845321..3845371,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.78e-17;82!UBERON:0006215;7.88e-12;3!UBERON:0010122;2.70e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.55e-84!57;UBERON:0005068!2.55e-84!57;UBERON:0006241!2.55e-84!57;UBERON:0007135!2.55e-84!57;UBERON:0002616!4.98e-81!59;UBERON:0000955!2.91e-77!69;UBERON:0006238!2.91e-77!69;UBERON:0002780!1.03e-75!41;UBERON:0001890!1.03e-75!41;UBERON:0006240!1.03e-75!41;UBERON:0003080!1.03e-73!42;UBERON:0001017!1.45e-72!82;UBERON:0005743!1.16e-68!86;UBERON:0001893!2.51e-68!34;UBERON:0001869!3.32e-68!32;UBERON:0002020!1.11e-67!34;UBERON:0003528!1.11e-67!34;UBERON:0002791!1.46e-65!33;UBERON:0000073!7.44e-64!94;UBERON:0001016!7.44e-64!94;UBERON:0002346!7.94e-63!90;UBERON:0002619!3.66e-58!22;UBERON:0003075!1.09e-57!86;UBERON:0007284!1.09e-57!86;UBERON:0001950!6.41e-53!20;UBERON:0000956!1.11e-50!25;UBERON:0000203!1.11e-50!25;UBERON:0003056!5.41e-48!61;UBERON:0007023!4.67e-47!115;UBERON:0000033!2.28e-42!123;UBERON:0000153!7.84e-40!129;UBERON:0007811!7.84e-40!129;UBERON:0000924!9.44e-37!173;UBERON:0006601!9.44e-37!173;UBERON:0004121!4.49e-33!169;UBERON:0000025!8.14e-20!194;UBERON:0002420!7.71e-19!9;UBERON:0007245!7.71e-19!9;UBERON:0010009!7.71e-19!9;UBERON:0010011!7.71e-19!9;UBERON:0000454!7.71e-19!9;UBERON:0000200!1.88e-18!6;UBERON:0002308!5.30e-18!9;UBERON:0000125!5.30e-18!9;UBERON:0001871!7.82e-18!7;UBERON:0001872!4.51e-15!5;UBERON:0002021!6.00e-15!5;UBERON:0000349!9.43e-15!5;UBERON:0004111!1.69e-14!241;UBERON:0009663!1.02e-13!7;UBERON:0004733!4.75e-13!12;UBERON:0002028!4.75e-13!12;UBERON:0007277!4.75e-13!12;UBERON:0003076!9.13e-13!15;UBERON:0003057!9.13e-13!15;UBERON:0004732!6.15e-12!13;UBERON:0000477!7.39e-12!286;UBERON:0000369!1.05e-11!4;UBERON:0002435!1.05e-11!4;UBERON:0000204!1.05e-11!4;UBERON:0010082!1.05e-11!4;UBERON:0000483!8.51e-11!309;UBERON:0000119!1.41e-10!312;UBERON:0002680!2.48e-10!9;UBERON:0001895!2.48e-10!9;UBERON:0010092!2.48e-10!9;UBERON:0002771!3.41e-10!3;UBERON:0000475!1.12e-09!365;UBERON:0001894!4.23e-09!7;UBERON:0006222!4.23e-09!7;UBERON:0005383!4.73e-09!3;UBERON:0005382!4.73e-09!3;UBERON:0000064!6.89e-09!219;UBERON:0000988!2.20e-08!3;UBERON:0002298!6.67e-08!8;UBERON:0001870!2.76e-07!2;UBERON:0001876!5.91e-07!2;UBERON:0000062!7.31e-07!511;UBERON:0001954!8.34e-07!2;UBERON:0003022!8.34e-07!2;UBERON:0002421!8.34e-07!2;UBERON:0002600!8.34e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.89e-78;22!UBERON:0001869;8.74e-77;32!UBERON:0001893;9.63e-75;34!UBERON:0002791;1.25e-71;32!UBERON:0001950;3.66e-71;20!UBERON:0003528;1.02e-70;34!UBERON:0002020;1.02e-70;34!UBERON:0000956;1.47e-68;25!UBERON:0000203;1.47e-68;25!UBERON:0002780;1.89e-58;41!UBERON:0001890;1.89e-58;41!UBERON:0000073;1.29e-49;53!UBERON:0002616;1.29e-49;53!UBERON:0000955;2.40e-36;68!UBERON:0001017;4.93e-33;75!UBERON:0001016;8.25e-28;83!UBERON:0000200;2.36e-24;6!UBERON:0001871;6.02e-20;6!UBERON:0001872;8.37e-20;5!UBERON:0002021;1.38e-19;5!UBERON:0002420;1.57e-19;9!UBERON:0007245;1.57e-19;9!UBERON:0010009;1.57e-19;9!UBERON:0010011;1.57e-19;9!UBERON:0000454;1.57e-19;9!UBERON:0000349;2.40e-19;5!UBERON:0000369;3.22e-15;4!UBERON:0002435;3.22e-15;4!UBERON:0000204;3.22e-15;4!UBERON:0000125;4.93e-14;9!UBERON:0002308;4.93e-14;9!UBERON:0007023;2.46e-13;114!UBERON:0001870;4.04e-13;3!UBERON:0009663;5.48e-13;7!UBERON:0005383;1.21e-11;3!UBERON:0005382;1.21e-11;3!UBERON:0011216;2.76e-11;132!UBERON:0004733;2.73e-10;12!UBERON:0002028;2.73e-10;12!UBERON:0002680;6.02e-10;9!UBERON:0001895;6.02e-10;9!UBERON:0004732;1.88e-09;13!UBERON:0002771;2.36e-09;2!UBERON:0002702;2.88e-09;2!UBERON:0001876;7.69e-09;2!UBERON:0001954;1.22e-08;2!UBERON:0003022;1.22e-08;2!UBERON:0002421;1.22e-08;2!UBERON:0002600;1.22e-08;2!UBERON:0002360;2.28e-08;2!UBERON:0000094;2.28e-08;2!UBERON:0010743;2.28e-08;2!UBERON:0001873;2.70e-08;2!UBERON:0010314;5.06e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.93e-88,53;UBERON:0002616,1.93e-88,53;UBERON:0001893,8.68e-87,34;UBERON:0001869,2.46e-86,32;UBERON:0001049,2.56e-83,56;UBERON:0005068,2.56e-83,56;UBERON:0006241,2.56e-83,56;UBERON:0007135,2.56e-83,56;UBERON:0002780,4.06e-81,41;UBERON:0001890,4.06e-81,41;UBERON:0003080,4.06e-81,41;UBERON:0006240,4.06e-81,41;UBERON:0003528,1.83e-80,34;UBERON:0002020,1.83e-80,34;UBERON:0002791,6.81e-80,32;UBERON:0000955,1.89e-78,68;UBERON:0006238,1.89e-78,68;UBERON:0002619,2.95e-78,22;UBERON:0001017,6.72e-72,81;UBERON:0001950,3.73e-71,20;UBERON:0000956,1.49e-68,25;UBERON:0000203,1.49e-68,25;UBERON:0001016,2.87e-67,89;UBERON:0002346,8.75e-58,86;UBERON:0003075,2.00e-54,82;UBERON:0007284,2.00e-54,82;UBERON:0003056,2.08e-52,61;UBERON:0010371,3.76e-41,104;UBERON:0007023,8.38e-40,114;UBERON:0010314,1.21e-34,132;UBERON:0004121,1.44e-34,171;UBERON:0000924,1.44e-34,171;UBERON:0006601,1.44e-34,171;UBERON:0000200,2.41e-24,6;UBERON:0011216,3.41e-24,223;UBERON:0001871,6.22e-20,6;UBERON:0001872,8.87e-20,5;UBERON:0002021,1.30e-19,5;UBERON:0002420,1.51e-19,9;UBERON:0007245,1.51e-19,9;UBERON:0010009,1.51e-19,9;UBERON:0010011,1.51e-19,9;UBERON:0000454,1.51e-19,9;UBERON:0000349,2.40e-19,5;UBERON:0000025,2.38e-18,192;UBERON:0000369,3.10e-15,4;UBERON:0002435,3.10e-15,4;UBERON:0000204,3.10e-15,4;UBERON:0010082,3.10e-15,4;UBERON:0000125,4.81e-14,9;UBERON:0002308,4.81e-14,9;UBERON:0001870,3.97e-13,3;UBERON:0009663,5.27e-13,7;UBERON:0004111,5.77e-13,240;UBERON:0005383,1.17e-11,3;UBERON:0005382,1.17e-11,3;UBERON:0004733,2.98e-10,12;UBERON:0002028,2.98e-10,12;UBERON:0007277,2.98e-10,12;UBERON:0002680,6.20e-10,9;UBERON:0001895,6.20e-10,9;UBERON:0010092,6.20e-10,9;UBERON:0004732,2.04e-09,13;UBERON:0002771,2.36e-09,2;UBERON:0002702,2.88e-09,2;UBERON:0000483,4.48e-09,306;UBERON:0000119,6.63e-09,309;UBERON:0001876,7.69e-09,2;UBERON:0001954,1.22e-08,2;UBERON:0003022,1.22e-08,2;UBERON:0002421,1.22e-08,2;UBERON:0002600,1.22e-08,2;UBERON:0002360,2.33e-08,2;UBERON:0000094,2.33e-08,2;UBERON:0010743,2.33e-08,2;UBERON:0001873,2.60e-08,2;UBERON:0010122,2.60e-08,2;UBERON:0003076,4.42e-08,15;UBERON:0003057,4.42e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.145740153753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.5201071168364,47.1242544975218,0,0,69.0380084578539,0,0,0,0,0,0,0,0,0,0,0,0,59.1292975118083,123.659874849748,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,4.42870692906919,9.88890796728345,18.30980835805,18.9090534482394,8.57088094965288,45.1933918137183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4118219365785,0,0,0,0,0,0,0,0,0,1.95463285643963,0,1.87411556580271,0,0,0,0,0,4.28501866282686,2.21153028699708,0,0,0,0,0,0,13.6612582094301,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,132.382874343742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,42.1471735598931,31.1905799995508,0,0,0,0,0,129.639553908225,0,0,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.758522495873,163.515194968631,132.32681375677,0,1.10929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1300541209005,0,0,118.625738218185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.560712313821,0,0,8.715571724169,9.04731079090716,0,0,0,0,0,0,71.4871275323595,128.943884456282,70.3985318442037,87.1744548023209,2.7727886584389,116.529970402207,72.5025648887011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.288875681838,96.0726061295032,137.653406469789,103.748265477232,2.18789923607288,0,0,0.175871244359621,0,0,0,0.606965604236632,0.91064876540519,0,0,0,3.33051691586475,121.482312770582,0,0,0,9.42693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,2.68453036314702,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,108.242452383936,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.145740153753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.5201071168364,47.1242544975218,0,0,69.0380084578539,0,0,0,0,0,0,0,0,0,0,0,0,59.1292975118083,123.659874849748,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,4.42870692906919,9.88890796728345,18.30980835805,18.9090534482394,8.57088094965288,45.1933918137183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4118219365785,0,0,0,0,0,0,0,0,0,1.95463285643963,0,1.87411556580271,0,0,0,0,0,4.28501866282686,2.21153028699708,0,0,0,0,0,0,13.6612582094301,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,132.382874343742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,42.1471735598931,31.1905799995508,0,0,0,0,0,129.639553908225,0,0,1.20645552710496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.758522495873,163.515194968631,132.32681375677,0,1.10929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1300541209005,0,0,118.625738218185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.560712313821,0,0,8.715571724169,9.04731079090716,0,0,0,0,0,0,71.4871275323595,128.943884456282,70.3985318442037,87.1744548023209,2.7727886584389,116.529970402207,72.5025648887011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.288875681838,96.0726061295032,137.653406469789,103.748265477232,2.18789923607288,0,0,0.175871244359621,0,0,0,0.606965604236632,0.91064876540519,0,0,0,3.33051691586475,121.482312770582,0,0,0,9.42693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,2.68453036314702,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,108.242452383936,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@DLGAP1 | |||
}} | }} |
Latest revision as of 12:15, 19 September 2015
Short description: | p1@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DLGAP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000400147, ENST00000484845, ENST00000539435, NM_001003809, NM_001242765, NM_001242766_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | B7Z2I2B7Z9Y4O14490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data