FFCP PHASE1:Hg19::chr22:50523843..50523865,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:50523843..50523865,- to FFCP PHASE1:Hg19::chr22:50523843..50523865,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23209 | |EntrezGene=23209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17082 | |HGNC=17082 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z659,B7Z2T9 | |UniProt=B7Z659,B7Z2T9 | ||
|association_with_transcript=0bp_to_ENST00000431262,ENST00000535444_5end | |||
|cluster_id=chr22:50523843..50523865,- | |||
|description=CAGE_peak_1_at_MLC1_5end | |||
|id=chr22:50523843..50523865,- | |||
|ontology_enrichment_celltype=CL:0000763!9.93e-29!112;CL:0000049!9.93e-29!112;CL:0000037!3.25e-24!172;CL:0000566!3.25e-24!172;CL:0002032!2.11e-23!165;CL:0000837!2.11e-23!165;CL:0000988!1.97e-21!182;CL:0002057!7.42e-18!42;CL:0000860!1.12e-15!45;CL:0000839!6.15e-15!70;CL:0000766!2.25e-14!76;CL:0000557!5.12e-14!71;CL:0002194!1.37e-12!63;CL:0000576!1.37e-12!63;CL:0000040!1.37e-12!63;CL:0000559!1.37e-12!63;CL:0002009!9.74e-12!65;CL:0002031!5.73e-11!124;CL:0000738!1.67e-10!140;CL:0002087!2.59e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000763;2.12e-11;100!CL:0000576;5.09e-10;48!CL:0000860;3.42e-09;33!CL:0002057;3.42e-09;33!CL:0000766;2.69e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.06e-27,108;CL:0000049,1.06e-27,108;CL:0000037,8.72e-24,168;CL:0002032,1.87e-22,161;CL:0000837,1.87e-22,161;CL:0000988,7.63e-22,177;CL:0000860,1.15e-15,42;CL:0002057,1.15e-15,42;CL:0000473,2.38e-13,48;CL:0000234,2.38e-13,48;CL:0000766,3.81e-13,72;CL:0000839,1.47e-12,66;CL:0000557,2.07e-12,67;CL:0002194,9.05e-12,59;CL:0000576,9.05e-12,59;CL:0000040,9.05e-12,59;CL:0000559,9.05e-12,59;CL:0002009,4.71e-11,61;CL:0002087,8.48e-10,115;CL:0000738,1.01e-09,136;CL:0002031,2.56e-09,120;CL:0002393,5.78e-08,9;CL:0002397,5.78e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-12;42!CL:0000049;6.31e-10;108!UBERON:0006601;1.83e-08;82 | |||
|ontology_enrichment_disease=DOID:8692!8.69e-21!31;DOID:1240!1.96e-20!39;DOID:2531!9.38e-14!51;DOID:0060083!9.38e-14!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.55e-22;31!DOID:1240;8.86e-18;39!DOID:2531;3.47e-11;51!DOID:0060083;3.47e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.52e-24,39;DOID:8692,2.77e-23,31;DOID:2531,1.81e-16,51;DOID:0060083,1.81e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-36!57;UBERON:0005068!2.37e-36!57;UBERON:0006241!2.37e-36!57;UBERON:0007135!2.37e-36!57;UBERON:0001017!5.70e-35!82;UBERON:0005743!4.73e-33!86;UBERON:0007023!2.57e-32!115;UBERON:0002616!5.34e-31!59;UBERON:0000073!1.89e-29!94;UBERON:0001016!1.89e-29!94;UBERON:0000955!2.13e-29!69;UBERON:0006238!2.13e-29!69;UBERON:0002780!1.34e-27!41;UBERON:0001890!1.34e-27!41;UBERON:0006240!1.34e-27!41;UBERON:0003080!1.63e-26!42;UBERON:0001893!1.25e-25!34;UBERON:0002020!1.36e-25!34;UBERON:0003528!1.36e-25!34;UBERON:0002791!5.94e-25!33;UBERON:0001869!3.51e-24!32;UBERON:0002346!1.11e-23!90;UBERON:0003075!1.86e-21!86;UBERON:0007284!1.86e-21!86;UBERON:0000956!1.27e-18!25;UBERON:0000203!1.27e-18!25;UBERON:0002390!6.64e-17!102;UBERON:0003061!6.64e-17!102;UBERON:0002619!1.99e-16!22;UBERON:0003056!5.00e-15!61;UBERON:0001950!1.04e-14!20;UBERON:0002193!1.63e-14!112;UBERON:0002371!1.87e-12!80;UBERON:0001474!2.56e-12!86;UBERON:0000153!5.10e-12!129;UBERON:0007811!5.10e-12!129;UBERON:0000033!3.94e-11!123;UBERON:0003076!8.15e-11!15;UBERON:0003057!8.15e-11!15;UBERON:0000924!3.76e-10!173;UBERON:0006601!3.76e-10!173;UBERON:0004765!4.18e-09!101;UBERON:0001434!4.18e-09!101;UBERON:0004121!7.39e-09!169;UBERON:0002420!1.31e-08!9;UBERON:0007245!1.31e-08!9;UBERON:0010009!1.31e-08!9;UBERON:0010011!1.31e-08!9;UBERON:0000454!1.31e-08!9;UBERON:0004733!2.00e-08!12;UBERON:0002028!2.00e-08!12;UBERON:0007277!2.00e-08!12;UBERON:0002308!2.00e-08!9;UBERON:0000125!2.00e-08!9;UBERON:0002405!9.42e-08!115;UBERON:0004732!1.89e-07!13;UBERON:0009663!5.62e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.20e-29;34!UBERON:0003528;9.53e-29;34!UBERON:0002020;9.53e-29;34!UBERON:0001869;1.26e-28;32!UBERON:0002791;1.43e-28;32!UBERON:0000073;1.08e-25;53!UBERON:0002616;1.08e-25;53!UBERON:0002780;4.53e-25;41!UBERON:0001890;4.53e-25;41!UBERON:0000956;2.90e-24;25!UBERON:0000203;2.90e-24;25!UBERON:0002619;2.30e-21;22!UBERON:0001950;4.28e-19;20!UBERON:0000955;3.17e-18;68!UBERON:0001017;6.84e-18;75!UBERON:0001016;2.72e-15;83!UBERON:0002420;7.83e-11;9!UBERON:0007245;7.83e-11;9!UBERON:0010009;7.83e-11;9!UBERON:0010011;7.83e-11;9!UBERON:0000454;7.83e-11;9!UBERON:0004733;8.04e-11;12!UBERON:0002028;8.04e-11;12!UBERON:0000125;1.35e-10;9!UBERON:0002308;1.35e-10;9!UBERON:0004732;1.02e-09;13!UBERON:0009663;1.09e-08;7!UBERON:0007023;2.73e-08;114!UBERON:0002680;9.75e-08;9!UBERON:0001895;9.75e-08;9!UBERON:0002298;1.74e-07;6!UBERON:0000200;2.74e-07;6!UBERON:0000349;4.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.97e-48,56;UBERON:0005068,3.97e-48,56;UBERON:0006241,3.97e-48,56;UBERON:0007135,3.97e-48,56;UBERON:0001017,3.94e-45,81;UBERON:0000073,9.36e-45,53;UBERON:0002616,9.36e-45,53;UBERON:0001016,3.83e-41,89;UBERON:0000955,2.52e-38,68;UBERON:0006238,2.52e-38,68;UBERON:0002780,6.61e-35,41;UBERON:0001890,6.61e-35,41;UBERON:0003080,6.61e-35,41;UBERON:0006240,6.61e-35,41;UBERON:0001893,1.69e-33,34;UBERON:0003528,1.89e-33,34;UBERON:0002020,1.89e-33,34;UBERON:0001869,1.38e-31,32;UBERON:0002791,1.77e-31,32;UBERON:0002346,1.59e-30,86;UBERON:0003075,1.43e-27,82;UBERON:0007284,1.43e-27,82;UBERON:0007023,2.57e-26,114;UBERON:0000956,2.96e-24,25;UBERON:0000203,2.96e-24,25;UBERON:0002619,2.34e-21,22;UBERON:0003056,8.38e-20,61;UBERON:0001950,4.33e-19,20;UBERON:0010371,1.40e-18,104;UBERON:0010314,1.53e-15,132;UBERON:0004121,3.23e-15,171;UBERON:0000924,3.23e-15,171;UBERON:0006601,3.23e-15,171;UBERON:0002390,1.72e-14,98;UBERON:0003061,1.72e-14,98;UBERON:0003076,5.78e-14,15;UBERON:0003057,5.78e-14,15;UBERON:0002193,2.38e-12,108;UBERON:0002420,7.79e-11,9;UBERON:0007245,7.79e-11,9;UBERON:0010009,7.79e-11,9;UBERON:0010011,7.79e-11,9;UBERON:0000454,7.79e-11,9;UBERON:0004733,8.14e-11,12;UBERON:0002028,8.14e-11,12;UBERON:0007277,8.14e-11,12;UBERON:0000125,1.37e-10,9;UBERON:0002308,1.37e-10,9;UBERON:0002371,1.57e-10,76;UBERON:0001474,9.74e-10,82;UBERON:0004732,1.03e-09,13;UBERON:0009663,1.08e-08,7;UBERON:0002405,2.43e-08,93;UBERON:0011216,3.53e-08,223;UBERON:0004765,6.49e-08,90;UBERON:0002680,9.84e-08,9;UBERON:0001895,9.84e-08,9;UBERON:0010092,9.84e-08,9;UBERON:0002298,1.74e-07,6;UBERON:0000200,2.83e-07,6;UBERON:0000349,4.70e-07,5;UBERON:0000479,5.35e-07,773;UBERON:0001434,9.57e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81675280038043,0,33.5396551981554,35.20702641712,22.9949034122445,22.5976751270645,0,0,0,12.5876568591649,5.37361157336098,4.79929982279836,0,0,0,0,0,34.3512514021771,2.21598163412751,2.60707781711184,3.90619567288533,0.223915474239924,0.32389366601898,0.257575567634187,0.726991193897824,2.64513160582167,1.69808842831471,1.39457422143411,2.46700732813095,1.85823822537062,0.863077176966451,1.5369642391746,1.89185783910868,1.72372840368309,0.645484683583826,2.70852973188684,1.88242339542605,1.09162460023138,1.12361742222542,0.918251677112708,1.60464513538047,0.639337125799041,1.9791078011203,2.79249120670285,1.27867425159808,2.03146467040009,2.26954089876456,3.73693349397345,0.75374599577023,3.65038042894141,2.82345498116652,1.21079900526674,1.10483290796269,1.89877432464531,15.4216359007718,11.9058407980424,5.03180749220102,2.02191536063691,0.600707571366025,1.28580469357664,15.1056754182862,12.7306673407418,10.4118567645841,0,0,0,0,0,0,0,0,0,0,0.382273228125229,33.0428321447565,15.694239763483,22.9144153754317,0,0,0,0.501559486172034,0,0,0,0.445641827540694,0,0,0,0.768547918354051,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,1.59282707162048,0.651083453856419,0,1.20460095262218,1.53583933385302,0,1.89421801635213,0.821127996921047,0,2.13952156626806,1.44824403882799,7.31420598941885,2.01210257911091,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,6.87640146362991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,3.11211035399766,0,0.653847612453835,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,9.36060152002293,8.80484340132261,0.829312462163088,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,6.61302349561811,9.06341496928865,8.19384784466166,10.9091580837786,106.973836797657,36.4391590801341,9.27946575333234,16.4165940027662,10.2070200264506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,1.02943027143257,2.89475236572042,3.8828556147351,4.16237475433433,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.0457418040996,0,0,0,0.412164046590889,0.640986253728404,0.577566499444116,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,3.17020642346017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,5.07447609232169,2.29391162142713,1.70894156152249,2.38231775457789,4.11362273086194,1.94541993357815,1.62009431171434,5.55187623405989,0,0.962479855263359,0,0,0,0,5.57991954550878,75.2414230301719,74.687094351623,145.631424914031,63.9505222340874,70.7608888845916,23.5081719404188,64.8654768500316,25.0634477090067,72.4568808990862,24.2487993406586,17.152975111239,5.11015485228392,12.0226870664518,34.7182063668558,26.1701046234127,37.3742077434675,10.1601809609061,3.34087408674291,6.15436994738562,38.6751620220656,87.2648556154288,33.8368812210839,0,0.293016358543788,0,7.35526336231357,0,0,0,0,29.8244294329889,45.7175603334166,0,0,0,0.597743964753209,0,0,17.2834073428642,0.123084805461069,0,0,0,24.043901400663,0.0986434056369336,7.18449277040819,0,40.7119753359992,32.4688343566479,27.9459317201672,0,0,0,0,0,0,0,0.874813840149763,0,48.7157762197611,46.1884359935312,22.8872604475625,31.0727720406741,38.7167380829147,21.7191543182433,0,0,0.769502585037971,0,0,0,0,1.27600463892768,0,0,1.02193298195737,71.2690364033412,31.5802195610297,0.451191321234361,0,0.167821586975843,0.75901493089674,19.8670723725473,0,0,0,0,0,0.0884575645033392,0,0,0,0,36.6662163414883,0.802577647298789,28.345997932766,2.00700268137233,0,0,0,0,8.57003732565372,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,4.29363407483012,0,0,22.981818931984,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0,2.24396078799908,0,33.6235361677482,17.2500777403911,8.94226116468806,0,31.5464825135177,0,0.229160424011684,0,0.199679000498991,0,0,0.604651252380536,0,0,0,0,0,0,0.169346664131569,37.3757954210372,51.2124806979524,0,0.137539436597234,0,0,0,28.1877942893234,0,0,0.419636705079985,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,5.66438393170439,0,0,0,6.62534444561107,30.5107777013259,23.1407053049707,0,0,1.28144895081234,0.78602152549833,1.24271716604159,1.48849806543585,4.94029079744861,0,0,0,0,0,0,0,18.6074317793067,32.2149339341183,32.54964198369,41.8588712853752,27.2885466780657,33.6562503942298,0,0,0,1.99825733481477,0.2352658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| ||
|short_description=p1@MLC1 | |||
}} | }} |
Latest revision as of 18:30, 15 September 2015
Short description: | p1@MLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431262, ENST00000535444_5end |
EntrezGene: | MLC1 |
HGNC: | 17082 |
UniProt: | B7Z659B7Z2T9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.06e-27 | 108 |
common myeloid progenitor | 1.06e-27 | 108 |
hematopoietic stem cell | 8.72e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.87e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-22 | 161 |
hematopoietic cell | 7.63e-22 | 177 |
classical monocyte | 1.15e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-15 | 42 |
defensive cell | 2.38e-13 | 48 |
phagocyte | 2.38e-13 | 48 |
myeloid leukocyte | 3.81e-13 | 72 |
myeloid lineage restricted progenitor cell | 1.47e-12 | 66 |
granulocyte monocyte progenitor cell | 2.07e-12 | 67 |
monopoietic cell | 9.05e-12 | 59 |
monocyte | 9.05e-12 | 59 |
monoblast | 9.05e-12 | 59 |
promonocyte | 9.05e-12 | 59 |
macrophage dendritic cell progenitor | 4.71e-11 | 61 |
nongranular leukocyte | 8.48e-10 | 115 |
leukocyte | 1.01e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 2.56e-09 | 120 |
intermediate monocyte | 5.78e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.78e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.52e-24 | 39 |
myeloid leukemia | 2.77e-23 | 31 |
hematologic cancer | 1.81e-16 | 51 |
immune system cancer | 1.81e-16 | 51 |