FFCP PHASE1:Hg19::chr5:88179288..88179295,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:88179288..88179295,- to FFCP PHASE1:Hg19::chr5:88179288..88179295,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4208 | |EntrezGene=4208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |HGNC=6996 | ||
|TSSclassifier=strong | |||
|UniProt=Q06413 | |UniProt=Q06413 | ||
|association_with_transcript=-5bp_to_NM_001193350,NM_002397_5end | |||
|cluster_id=chr5:88179288..88179295,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_18_at_MEF2C_5end | |||
|id=chr5:88179288..88179295,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.20e-08;1!CL:0002372;2.20e-08;1!CL:0000737;3.80e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.13e-08,1;CL:0002372,2.13e-08,1;CL:0000737,3.80e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.00e-08;82!UBERON:0005425;2.20e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.30e-34!41;UBERON:0001890!2.30e-34!41;UBERON:0006240!2.30e-34!41;UBERON:0001869!1.49e-33!32;UBERON:0003080!2.75e-33!42;UBERON:0001893!4.93e-33!34;UBERON:0002791!1.37e-31!33;UBERON:0002619!3.48e-29!22;UBERON:0002020!1.71e-28!34;UBERON:0003528!1.71e-28!34;UBERON:0000956!4.28e-27!25;UBERON:0000203!4.28e-27!25;UBERON:0001950!1.85e-26!20;UBERON:0007023!6.39e-25!115;UBERON:0001017!1.77e-23!82;UBERON:0002616!2.42e-23!59;UBERON:0001049!5.85e-23!57;UBERON:0005068!5.85e-23!57;UBERON:0006241!5.85e-23!57;UBERON:0007135!5.85e-23!57;UBERON:0000955!2.77e-22!69;UBERON:0006238!2.77e-22!69;UBERON:0005743!9.21e-22!86;UBERON:0003056!5.00e-21!61;UBERON:0000073!1.04e-19!94;UBERON:0001016!1.04e-19!94;UBERON:0003075!6.43e-17!86;UBERON:0007284!6.43e-17!86;UBERON:0002346!1.21e-16!90;UBERON:0000153!1.96e-11!129;UBERON:0007811!1.96e-11!129;UBERON:0000033!3.87e-11!123;UBERON:0000200!1.67e-10!6;UBERON:0001871!2.18e-10!7;UBERON:0000924!5.23e-10!173;UBERON:0006601!5.23e-10!173;UBERON:0004121!5.71e-10!169;UBERON:0002021!4.15e-09!5;UBERON:0000349!1.39e-08!5;UBERON:0002420!4.22e-08!9;UBERON:0007245!4.22e-08!9;UBERON:0010009!4.22e-08!9;UBERON:0010011!4.22e-08!9;UBERON:0000454!4.22e-08!9;UBERON:0000369!4.16e-07!4;UBERON:0002435!4.16e-07!4;UBERON:0000204!4.16e-07!4;UBERON:0010082!4.16e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.41e-74;20!UBERON:0002619;2.10e-67;22!UBERON:0000956;2.60e-59;25!UBERON:0000203;2.60e-59;25!UBERON:0001869;3.98e-53;32!UBERON:0001893;1.97e-48;34!UBERON:0002791;8.67e-48;32!UBERON:0003528;9.59e-43;34!UBERON:0002020;9.59e-43;34!UBERON:0002780;1.75e-35;41!UBERON:0001890;1.75e-35;41!UBERON:0000200;1.06e-29;6!UBERON:0001871;1.62e-25;6!UBERON:0002021;1.51e-23;5!UBERON:0001870;4.81e-22;3!UBERON:0000073;1.21e-21;53!UBERON:0002616;1.21e-21;53!UBERON:0000955;2.37e-18;68!UBERON:0002771;2.08e-15;2!UBERON:0002702;2.08e-15;2!UBERON:0001017;9.65e-15;75!UBERON:0001016;3.85e-13;83!UBERON:0002022;2.20e-08;1!UBERON:0003112;2.20e-08;1!UBERON:0000941;2.20e-08;1!UBERON:0001785;2.20e-08;1!UBERON:0002464;2.20e-08;1!UBERON:0004904;2.20e-08;1!UBERON:0011158;2.20e-08;1!UBERON:0001021;2.20e-08;1!UBERON:0007190;2.20e-08;1!UBERON:0003128;2.20e-08;1!UBERON:0001703;2.20e-08;1!UBERON:0002241;2.20e-08;1!UBERON:0007023;2.63e-07;114!UBERON:0011216;6.28e-07;132!UBERON:0001872;7.48e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.99e-74,20;UBERON:0002619,4.42e-67,22;UBERON:0001869,2.44e-59,32;UBERON:0000956,5.02e-59,25;UBERON:0000203,5.02e-59,25;UBERON:0001893,9.05e-56,34;UBERON:0002791,1.78e-52,32;UBERON:0002780,1.48e-51,41;UBERON:0001890,1.48e-51,41;UBERON:0003080,1.48e-51,41;UBERON:0006240,1.48e-51,41;UBERON:0003528,2.62e-49,34;UBERON:0002020,2.62e-49,34;UBERON:0000073,2.33e-39,53;UBERON:0002616,2.33e-39,53;UBERON:0003056,6.55e-38,61;UBERON:0000955,3.55e-37,68;UBERON:0006238,3.55e-37,68;UBERON:0001049,4.14e-37,56;UBERON:0005068,4.14e-37,56;UBERON:0006241,4.14e-37,56;UBERON:0007135,4.14e-37,56;UBERON:0001017,3.50e-34,81;UBERON:0001016,1.14e-33,89;UBERON:0000200,1.89e-29,6;UBERON:0003075,2.03e-27,82;UBERON:0007284,2.03e-27,82;UBERON:0002346,5.39e-26,86;UBERON:0001871,1.36e-25,6;UBERON:0002021,3.60e-23,5;UBERON:0001870,7.71e-22,3;UBERON:0010371,6.37e-21,104;UBERON:0010314,8.53e-20,132;UBERON:0004121,6.68e-16,171;UBERON:0000924,6.68e-16,171;UBERON:0006601,6.68e-16,171;UBERON:0002702,2.59e-15,2;UBERON:0002771,3.22e-15,2;UBERON:0007023,9.79e-15,114;UBERON:0011216,5.53e-14,223;UBERON:0000025,9.40e-10,192;UBERON:0002022,1.59e-08,1;UBERON:0003112,1.71e-08,1;UBERON:0011158,1.71e-08,1;UBERON:0003128,1.71e-08,1;UBERON:0001703,1.71e-08,1;UBERON:0002241,1.71e-08,1;UBERON:0004761,1.71e-08,1;UBERON:0009617,1.71e-08,1;UBERON:0000941,1.98e-08,1;UBERON:0001785,1.98e-08,1;UBERON:0002464,1.98e-08,1;UBERON:0004904,1.98e-08,1;UBERON:0001021,1.98e-08,1;UBERON:0003902,1.98e-08,1;UBERON:0005425,1.98e-08,1;UBERON:0007190,2.29e-08,1;UBERON:0004111,4.34e-07,240;UBERON:0001872,7.94e-07,5 | |||
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|short_description=p18@MEF2C | |||
}} | }} |
Latest revision as of 03:53, 19 September 2015
Short description: | p18@MEF2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_MEF2C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -5bp_to_NM_001193350, NM_002397_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | Q06413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.13e-08 | 1 |
myotube | 2.13e-08 | 1 |
striated muscle cell | 3.80e-08 | 4 |