FFCP PHASE1:Hg19::chr6:43478239..43478281,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:43478239..43478281,- to FFCP PHASE1:Hg19::chr6:43478239..43478281,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221424 | |EntrezGene=221424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21375 | |HGNC=21375 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JTD7 | |UniProt=Q5JTD7 | ||
|association_with_transcript=142bp_to_ENST00000372441,NM_001012974,uc003ovk.1_5end | |||
|cluster_id=chr6:43478239..43478281,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_LRRC73_5end | |||
|id=chr6:43478239..43478281,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.19e-12;1!UBERON:0006601;4.32e-09;82!UBERON:0010122;8.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-54!57;UBERON:0005068!1.01e-54!57;UBERON:0006241!1.01e-54!57;UBERON:0007135!1.01e-54!57;UBERON:0001869!1.10e-54!32;UBERON:0002020!1.25e-54!34;UBERON:0003528!1.25e-54!34;UBERON:0001893!4.43e-51!34;UBERON:0002616!1.44e-49!59;UBERON:0002791!1.13e-48!33;UBERON:0000955!1.88e-48!69;UBERON:0006238!1.88e-48!69;UBERON:0002619!3.09e-48!22;UBERON:0002780!4.25e-48!41;UBERON:0001890!4.25e-48!41;UBERON:0006240!4.25e-48!41;UBERON:0003080!9.00e-47!42;UBERON:0001017!4.18e-46!82;UBERON:0005743!1.87e-43!86;UBERON:0001950!3.57e-43!20;UBERON:0000956!6.27e-42!25;UBERON:0000203!6.27e-42!25;UBERON:0000073!2.63e-40!94;UBERON:0001016!2.63e-40!94;UBERON:0003075!5.42e-39!86;UBERON:0007284!5.42e-39!86;UBERON:0002346!7.66e-39!90;UBERON:0007023!7.40e-33!115;UBERON:0003056!6.77e-32!61;UBERON:0000033!1.01e-28!123;UBERON:0000153!7.44e-27!129;UBERON:0007811!7.44e-27!129;UBERON:0001871!2.34e-21!7;UBERON:0000924!3.00e-21!173;UBERON:0006601!3.00e-21!173;UBERON:0004121!7.37e-21!169;UBERON:0000025!1.15e-16!194;UBERON:0002420!1.29e-14!9;UBERON:0007245!1.29e-14!9;UBERON:0010009!1.29e-14!9;UBERON:0010011!1.29e-14!9;UBERON:0000454!1.29e-14!9;UBERON:0000349!2.08e-14!5;UBERON:0002308!6.77e-14!9;UBERON:0000125!6.77e-14!9;UBERON:0001872!1.26e-13!5;UBERON:0004111!1.85e-13!241;UBERON:0000200!4.10e-11!6;UBERON:0002298!5.43e-11!8;UBERON:0000064!6.74e-11!219;UBERON:0000483!3.11e-10!309;UBERON:0000477!3.54e-10!286;UBERON:0000119!5.15e-10!312;UBERON:0009663!6.63e-10!7;UBERON:0003076!1.41e-09!15;UBERON:0003057!1.41e-09!15;UBERON:0004733!1.58e-09!12;UBERON:0002028!1.58e-09!12;UBERON:0007277!1.58e-09!12;UBERON:0000475!3.73e-09!365;UBERON:0002021!4.79e-09!5;UBERON:0004732!1.04e-08!13;UBERON:0002771!1.74e-08!3;UBERON:0001896!1.78e-08!3;UBERON:0005290!1.78e-08!3;UBERON:0010096!1.78e-08!3;UBERON:0000988!4.11e-08!3;UBERON:0000062!2.04e-07!511;UBERON:0000369!3.10e-07!4;UBERON:0002435!3.10e-07!4;UBERON:0000204!3.10e-07!4;UBERON:0010082!3.10e-07!4;UBERON:0001876!8.77e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.93e-65;32!UBERON:0002791;1.31e-59;32!UBERON:0001893;1.53e-58;34!UBERON:0003528;9.33e-51;34!UBERON:0002020;9.33e-51;34!UBERON:0002780;1.02e-46;41!UBERON:0001890;1.02e-46;41!UBERON:0002619;1.08e-46;22!UBERON:0001950;1.51e-41;20!UBERON:0000956;3.53e-41;25!UBERON:0000203;3.53e-41;25!UBERON:0001871;1.95e-39;6!UBERON:0002420;1.06e-30;9!UBERON:0007245;1.06e-30;9!UBERON:0010009;1.06e-30;9!UBERON:0010011;1.06e-30;9!UBERON:0000454;1.06e-30;9!UBERON:0000955;1.02e-26;68!UBERON:0000073;1.93e-26;53!UBERON:0002616;1.93e-26;53!UBERON:0000369;1.10e-25;4!UBERON:0002435;1.10e-25;4!UBERON:0000204;1.10e-25;4!UBERON:0009663;1.19e-25;7!UBERON:0001017;5.50e-21;75!UBERON:0000349;1.98e-20;5!UBERON:0000125;4.98e-20;9!UBERON:0002308;4.98e-20;9!UBERON:0005383;5.79e-16;3!UBERON:0005382;5.79e-16;3!UBERON:0001016;5.48e-14;83!UBERON:0002022;7.87e-13;1!UBERON:0001874;7.87e-13;1!UBERON:0002902;2.19e-12;1!UBERON:0001882;2.19e-12;1!UBERON:0003112;2.19e-12;1!UBERON:0011158;2.19e-12;1!UBERON:0009899;2.19e-12;1!UBERON:0007190;2.19e-12;1!UBERON:0003128;2.19e-12;1!UBERON:0005403;2.19e-12;1!UBERON:0001703;2.19e-12;1!UBERON:0002241;2.19e-12;1!UBERON:0002021;8.86e-10;5!UBERON:0011216;1.79e-09;132!UBERON:0000200;2.70e-08;6!UBERON:0007023;7.63e-08;114!UBERON:0002771;8.05e-07;2!UBERON:0001876;8.05e-07;2!UBERON:0001873;8.05e-07;2!UBERON:0001954;8.05e-07;2!UBERON:0001875;8.05e-07;2!UBERON:0003022;8.05e-07;2!UBERON:0002421;8.05e-07;2!UBERON:0006514;8.05e-07;2!UBERON:0002600;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.71e-73,32;UBERON:0001893,8.83e-69,34;UBERON:0002780,6.13e-65,41;UBERON:0001890,6.13e-65,41;UBERON:0003080,6.13e-65,41;UBERON:0006240,6.13e-65,41;UBERON:0002791,1.11e-63,32;UBERON:0003528,6.02e-60,34;UBERON:0002020,6.02e-60,34;UBERON:0000073,4.22e-50,53;UBERON:0002616,4.22e-50,53;UBERON:0001049,2.30e-47,56;UBERON:0005068,2.30e-47,56;UBERON:0006241,2.30e-47,56;UBERON:0007135,2.30e-47,56;UBERON:0002619,1.03e-46,22;UBERON:0000955,2.03e-43,68;UBERON:0006238,2.03e-43,68;UBERON:0003056,2.15e-43,61;UBERON:0001950,1.76e-41,20;UBERON:0000956,3.41e-41,25;UBERON:0000203,3.41e-41,25;UBERON:0001871,1.03e-39,6;UBERON:0001017,2.60e-36,81;UBERON:0001016,1.45e-32,89;UBERON:0003075,6.33e-32,82;UBERON:0007284,6.33e-32,82;UBERON:0002420,6.52e-31,9;UBERON:0007245,6.52e-31,9;UBERON:0010009,6.52e-31,9;UBERON:0010011,6.52e-31,9;UBERON:0000454,6.52e-31,9;UBERON:0002346,2.29e-30,86;UBERON:0000369,7.23e-26,4;UBERON:0002435,7.23e-26,4;UBERON:0000204,7.23e-26,4;UBERON:0010082,7.23e-26,4;UBERON:0009663,1.05e-25,7;UBERON:0010371,8.12e-25,104;UBERON:0010314,7.39e-22,132;UBERON:0000349,9.55e-21,5;UBERON:0000125,4.53e-20,9;UBERON:0002308,4.53e-20,9;UBERON:0007023,8.57e-20,114;UBERON:0004121,3.18e-16,171;UBERON:0000924,3.18e-16,171;UBERON:0006601,3.18e-16,171;UBERON:0005383,4.30e-16,3;UBERON:0005382,4.30e-16,3;UBERON:0011216,1.29e-13,223;UBERON:0002022,7.03e-13,1;UBERON:0001874,8.85e-13,1;UBERON:0000025,1.57e-12,192;UBERON:0003112,1.75e-12,1;UBERON:0011158,1.75e-12,1;UBERON:0003128,1.75e-12,1;UBERON:0001703,1.75e-12,1;UBERON:0002241,1.75e-12,1;UBERON:0004761,1.75e-12,1;UBERON:0009617,1.75e-12,1;UBERON:0001882,1.96e-12,1;UBERON:0005403,1.96e-12,1;UBERON:0002902,3.45e-12,1;UBERON:0009899,3.45e-12,1;UBERON:0007190,4.81e-12,1;UBERON:0002021,1.38e-09,5;UBERON:0004111,1.38e-09,240;UBERON:0000200,3.13e-08,6;UBERON:0000483,5.05e-07,306;UBERON:0001876,5.73e-07,2;UBERON:0001873,6.07e-07,2;UBERON:0010122,6.07e-07,2;UBERON:0000119,6.23e-07,309;UBERON:0001954,6.42e-07,2;UBERON:0003022,6.42e-07,2;UBERON:0002421,6.42e-07,2;UBERON:0002600,6.42e-07,2;UBERON:0002771,6.80e-07,2;UBERON:0005253,7.20e-07,2;UBERON:0001875,9.54e-07,2;UBERON:0006514,9.54e-07,2 | |||
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| ||
|short_description=p5@LRRC73 | |||
}} | }} |
Latest revision as of 22:25, 18 September 2015
Short description: | p5@LRRC73 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC73_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 142bp_to_ENST00000372441, NM_001012974, uc003ovk.1_5end |
EntrezGene: | LRRC73 |
HGNC: | 21375 |
UniProt: | Q5JTD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data