FFCP PHASE1:Hg19::chr9:73736331..73736347,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:73736331..73736347,- to FFCP PHASE1:Hg19::chr9:73736331..73736347,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCF6 | |UniProt=Q9HCF6 | ||
|association_with_transcript=166bp_to_ENST00000377110,ENST00000377111,NM_001007471,uc004aic.2,uc004aid.2,uc010mor.2_5end | |||
|cluster_id=chr9:73736331..73736347,- | |||
|coexpression_cluster_id=C693 | |||
|description=CAGE_peak_3_at_TRPM3_5end | |||
|id=chr9:73736331..73736347,- | |||
|ontology_enrichment_celltype=CL:0002322!1.13e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.46e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.51e-17,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.09e-18;82!UBERON:0006215;1.37e-12;3!UBERON:0006241;1.48e-11;3!UBERON:0003057;1.48e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.50e-98!57;UBERON:0005068!2.50e-98!57;UBERON:0006241!2.50e-98!57;UBERON:0007135!2.50e-98!57;UBERON:0001017!1.22e-86!82;UBERON:0005743!3.41e-85!86;UBERON:0002616!8.42e-82!59;UBERON:0000073!5.61e-76!94;UBERON:0001016!5.61e-76!94;UBERON:0003075!9.03e-76!86;UBERON:0007284!9.03e-76!86;UBERON:0000955!3.06e-74!69;UBERON:0006238!3.06e-74!69;UBERON:0002780!1.29e-72!41;UBERON:0001890!1.29e-72!41;UBERON:0006240!1.29e-72!41;UBERON:0002346!7.70e-72!90;UBERON:0003080!1.08e-70!42;UBERON:0002020!2.97e-64!34;UBERON:0003528!2.97e-64!34;UBERON:0001893!9.43e-64!34;UBERON:0002791!3.38e-61!33;UBERON:0001869!1.49e-58!32;UBERON:0003056!1.89e-54!61;UBERON:0002619!4.07e-52!22;UBERON:0007023!5.50e-52!115;UBERON:0001950!9.25e-47!20;UBERON:0000956!2.23e-45!25;UBERON:0000203!2.23e-45!25;UBERON:0000033!2.61e-44!123;UBERON:0004121!3.01e-43!169;UBERON:0000924!6.20e-42!173;UBERON:0006601!6.20e-42!173;UBERON:0000153!1.13e-41!129;UBERON:0007811!1.13e-41!129;UBERON:0003076!3.21e-27!15;UBERON:0003057!3.21e-27!15;UBERON:0000025!6.50e-24!194;UBERON:0002308!5.22e-20!9;UBERON:0000125!5.22e-20!9;UBERON:0004733!8.48e-20!12;UBERON:0002028!8.48e-20!12;UBERON:0007277!8.48e-20!12;UBERON:0002420!1.10e-19!9;UBERON:0007245!1.10e-19!9;UBERON:0010009!1.10e-19!9;UBERON:0010011!1.10e-19!9;UBERON:0000454!1.10e-19!9;UBERON:0002298!2.24e-18!8;UBERON:0004732!4.08e-18!13;UBERON:0004111!8.72e-17!241;UBERON:0001871!7.49e-16!7;UBERON:0000200!1.20e-15!6;UBERON:0000483!8.47e-15!309;UBERON:0000349!1.48e-14!5;UBERON:0009663!1.55e-14!7;UBERON:0000119!1.59e-14!312;UBERON:0000477!9.21e-14!286;UBERON:0001872!1.10e-13!5;UBERON:0002021!1.30e-13!5;UBERON:0000064!2.64e-13!219;UBERON:0002680!3.40e-12!9;UBERON:0001895!3.40e-12!9;UBERON:0010092!3.40e-12!9;UBERON:0000475!7.95e-12!365;UBERON:0001894!3.41e-10!7;UBERON:0006222!3.41e-10!7;UBERON:0000988!3.62e-10!3;UBERON:0001896!4.58e-10!3;UBERON:0005290!4.58e-10!3;UBERON:0010096!4.58e-10!3;UBERON:0006331!5.15e-10!3;UBERON:0002240!1.99e-09!3;UBERON:0002771!1.48e-08!3;UBERON:0002148!2.52e-07!2;UBERON:0009662!2.52e-07!2;UBERON:0000922!2.82e-07!612;UBERON:0001897!4.17e-07!2;UBERON:0001875!4.82e-07!2;UBERON:0006514!4.82e-07!2;UBERON:0001954!5.58e-07!2;UBERON:0003022!5.58e-07!2;UBERON:0002421!5.58e-07!2;UBERON:0002600!5.58e-07!2;UBERON:0001876!6.08e-07!2;UBERON:0000062!6.68e-07!511;UBERON:0000369!6.96e-07!4;UBERON:0002435!6.96e-07!4;UBERON:0000204!6.96e-07!4;UBERON:0010082!6.96e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.10e-58;53!UBERON:0002616;7.10e-58;53!UBERON:0003528;1.97e-54;34!UBERON:0002020;1.97e-54;34!UBERON:0002780;2.43e-54;41!UBERON:0001890;2.43e-54;41!UBERON:0001893;1.80e-53;34!UBERON:0002791;4.41e-51;32!UBERON:0001869;5.50e-51;32!UBERON:0002619;9.09e-49;22!UBERON:0000956;1.40e-42;25!UBERON:0000203;1.40e-42;25!UBERON:0001950;2.09e-42;20!UBERON:0000955;3.19e-36;68!UBERON:0001017;9.64e-36;75!UBERON:0001016;3.44e-30;83!UBERON:0000125;6.03e-25;9!UBERON:0002308;6.03e-25;9!UBERON:0004733;6.90e-25;12!UBERON:0002028;6.90e-25;12!UBERON:0002420;2.05e-24;9!UBERON:0007245;2.05e-24;9!UBERON:0010009;2.05e-24;9!UBERON:0010011;2.05e-24;9!UBERON:0000454;2.05e-24;9!UBERON:0002298;5.83e-23;6!UBERON:0004732;7.92e-23;13!UBERON:0009663;5.06e-18;7!UBERON:0000349;1.08e-17;5!UBERON:0002021;5.05e-17;5!UBERON:0001872;1.23e-16;5!UBERON:0007023;1.05e-15;114!UBERON:0002680;2.97e-15;9!UBERON:0001895;2.97e-15;9!UBERON:0002784;1.17e-14;4!UBERON:0001894;8.00e-13;7!UBERON:0000988;1.99e-12;3!UBERON:0001896;2.78e-12;3!UBERON:0005290;2.78e-12;3!UBERON:0001871;5.24e-12;6!UBERON:0011216;8.52e-12;132!UBERON:0002240;1.48e-11;3!UBERON:0005174;1.48e-11;3!UBERON:0001137;1.48e-11;3!UBERON:0000200;4.35e-09;6!UBERON:0002148;7.65e-09;2!UBERON:0006331;7.65e-09;2!UBERON:0009662;7.65e-09;2!UBERON:0001897;1.36e-08;2!UBERON:0010225;1.36e-08;2!UBERON:0001875;1.58e-08;2!UBERON:0006514;1.58e-08;2!UBERON:0010314;2.43e-08;132!UBERON:0000369;2.51e-08;4!UBERON:0002435;2.51e-08;4!UBERON:0000204;2.51e-08;4!UBERON:0001954;2.77e-08;2!UBERON:0003022;2.77e-08;2!UBERON:0002421;2.77e-08;2!UBERON:0002600;2.77e-08;2!UBERON:0001876;3.20e-08;2!UBERON:0001905;9.09e-08;2!UBERON:0002757;9.09e-08;2!UBERON:0010134;9.09e-08;2!UBERON:0005408;9.09e-08;2!UBERON:0001899;9.09e-08;2!UBERON:0002771;1.72e-07;2 | |||
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| ||
|short_description=p3@TRPM3 | |||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p3@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRPM3_5end |
Coexpression cluster: | C693_cerebellum_medulla_spinal_locus_Hepatocyte_pons_thalamus |
Association with transcript: | 166bp_to_ENST00000377110, ENST00000377111, NM_001007471, uc004aic.2, uc004aid.2, uc010mor.2_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | Q9HCF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.51e-17 | 5 |