FFCP PHASE1:Hg19::chr18:5543988..5544019,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |||
|TSSclassifier=strong | |||
|UniProt=A8K968 | |||
|association_with_transcript=0bp_to_ENST00000540638_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_EPB41L3_5end | |||
|id=chr18:5543988..5544019,- | |||
|ontology_enrichment_celltype=CL:0002057!1.14e-28!42;CL:0002194!7.99e-27!63;CL:0000576!7.99e-27!63;CL:0000040!7.99e-27!63;CL:0000559!7.99e-27!63;CL:0002009!8.03e-27!65;CL:0000860!2.09e-24!45;CL:0000557!2.57e-23!71;CL:0000839!5.40e-21!70;CL:0000766!1.10e-20!76;CL:0000763!2.09e-10!112;CL:0000049!2.09e-10!112;CL:0002078!1.04e-07!44;CL:0000115!1.05e-07!35;CL:0002139!5.20e-07!24;CL:0002393!6.42e-07!9;CL:0002397!6.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-21;33!CL:0002057;1.32e-21;33!CL:0000473;4.39e-21;39!CL:0000234;4.39e-21;39!CL:0000576;5.04e-18;48!CL:0000766;3.28e-11;69!CL:0002139;3.57e-07;24!CL:0000115;8.05e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.91e-33,48;CL:0000234,5.91e-33,48;CL:0002194,9.03e-31,59;CL:0000576,9.03e-31,59;CL:0000040,9.03e-31,59;CL:0000559,9.03e-31,59;CL:0002009,1.10e-30,61;CL:0000860,2.32e-29,42;CL:0002057,2.32e-29,42;CL:0000557,7.67e-26,67;CL:0000839,1.87e-23,66;CL:0000766,8.79e-23,72;CL:0000763,8.03e-12,108;CL:0000049,8.03e-12,108;CL:0002078,5.55e-08,45;CL:0000115,6.42e-08,36;CL:0002139,3.78e-07,24;CL:0002393,4.69e-07,9;CL:0002397,4.69e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.70e-19!80;UBERON:0004765!5.68e-19!101;UBERON:0001434!5.68e-19!101;UBERON:0001474!1.37e-18!86;UBERON:0002193!9.13e-17!112;UBERON:0003081!1.97e-16!216;UBERON:0002390!3.30e-16!102;UBERON:0003061!3.30e-16!102;UBERON:0007023!6.78e-16!115;UBERON:0002204!3.73e-15!167;UBERON:0001049!1.03e-13!57;UBERON:0005068!1.03e-13!57;UBERON:0006241!1.03e-13!57;UBERON:0007135!1.03e-13!57;UBERON:0003075!3.52e-13!86;UBERON:0007284!3.52e-13!86;UBERON:0000468!5.12e-13!659;UBERON:0000467!6.46e-13!625;UBERON:0000480!1.17e-12!626;UBERON:0002405!1.44e-12!115;UBERON:0002616!1.62e-12!59;UBERON:0002346!3.18e-12!90;UBERON:0003080!5.34e-11!42;UBERON:0002780!9.01e-11!41;UBERON:0001890!9.01e-11!41;UBERON:0006240!9.01e-11!41;UBERON:0005743!1.06e-10!86;UBERON:0001017!1.80e-10!82;UBERON:0000479!7.49e-10!787;UBERON:0000955!1.93e-09!69;UBERON:0006238!1.93e-09!69;UBERON:0003056!3.31e-09!61;UBERON:0000073!5.25e-09!94;UBERON:0001016!5.25e-09!94;UBERON:0002020!6.58e-09!34;UBERON:0003528!6.58e-09!34;UBERON:0001869!6.95e-09!32;UBERON:0001893!8.48e-09!34;UBERON:0002791!2.20e-08!33;UBERON:0002050!2.77e-08!605;UBERON:0005423!2.77e-08!605;UBERON:0000922!2.82e-08!612;UBERON:0002619!3.61e-08!22;UBERON:0000923!3.97e-08!604;UBERON:0005291!3.97e-08!604;UBERON:0006598!3.97e-08!604;UBERON:0002532!3.97e-08!604;UBERON:0000025!5.83e-08!194;UBERON:0000062!7.51e-08!511;UBERON:0000956!7.73e-08!25;UBERON:0000203!7.73e-08!25;UBERON:0001950!1.07e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.08e-08;32!UBERON:0002619;2.26e-08;22!UBERON:0002780;3.69e-08;41!UBERON:0001890;3.69e-08;41!UBERON:0001893;4.09e-08;34!UBERON:0000956;4.55e-08;25!UBERON:0000203;4.55e-08;25!UBERON:0003528;4.81e-08;34!UBERON:0002020;4.81e-08;34!UBERON:0002791;6.17e-08;32!UBERON:0001950;6.90e-08;20!UBERON:0000073;1.35e-07;53!UBERON:0002616;1.35e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-21,76;UBERON:0001434,5.79e-21,100;UBERON:0001474,4.97e-20,82;UBERON:0002405,5.43e-20,93;UBERON:0004765,1.29e-19,90;UBERON:0002193,2.21e-18,108;UBERON:0002390,8.15e-18,98;UBERON:0003061,8.15e-18,98;UBERON:0003081,3.36e-17,203;UBERON:0002204,2.29e-16,167;UBERON:0007023,9.05e-16,114;UBERON:0010314,1.75e-15,132;UBERON:0000479,8.37e-14,773;UBERON:0001049,8.82e-14,56;UBERON:0005068,8.82e-14,56;UBERON:0006241,8.82e-14,56;UBERON:0007135,8.82e-14,56;UBERON:0000926,5.00e-13,315;UBERON:0004120,5.00e-13,315;UBERON:0006603,5.00e-13,315;UBERON:0000073,6.41e-13,53;UBERON:0002616,6.41e-13,53;UBERON:0003075,1.09e-12,82;UBERON:0007284,1.09e-12,82;UBERON:0002346,8.25e-12,86;UBERON:0002780,5.26e-11,41;UBERON:0001890,5.26e-11,41;UBERON:0003080,5.26e-11,41;UBERON:0006240,5.26e-11,41;UBERON:0000923,1.66e-10,560;UBERON:0010316,1.66e-10,560;UBERON:0005291,1.66e-10,560;UBERON:0006598,1.66e-10,560;UBERON:0010317,1.66e-10,560;UBERON:0002532,1.66e-10,560;UBERON:0001017,3.44e-10,81;UBERON:0002050,4.57e-10,564;UBERON:0005423,8.34e-10,581;UBERON:0000955,1.84e-09,68;UBERON:0006238,1.84e-09,68;UBERON:0003528,4.28e-09,34;UBERON:0002020,4.28e-09,34;UBERON:0001869,4.53e-09,32;UBERON:0003056,5.36e-09,61;UBERON:0001893,5.55e-09,34;UBERON:0000922,6.77e-09,592;UBERON:0001016,1.25e-08,89;UBERON:0002791,1.45e-08,32;UBERON:0002619,2.45e-08,22;UBERON:0000956,5.35e-08,25;UBERON:0000203,5.35e-08,25;UBERON:0001950,7.47e-08,20;UBERON:0000025,8.16e-08,192;UBERON:0010371,6.83e-07,104 | |||
|phase1_expression=23.4365109259018,11.7755288140041,25.3717927372748,4.00293193412522,12.9618717383913,13.9574163856059,10.1319951267324,36.0080327853294,16.9770658329895,4.17747692052565,3.48900583986214,6.99012390816551,5.53910654279752,38.7388684764946,23.8606110524099,27.5653310045228,34.3535880973667,32.1336439770444,40.9863550984026,5.29420549730188,6.9360235023046,1.88072832886853,6.01095572975219,11.0868284309036,9.29015533001541,0,0,0,38.1563348543437,35.3123046249436,75.7050843015612,0,0,0,0,0,6.16560922603179,132.404902639119,116.115235085212,90.7105439592261,98.5228086655667,62.835371207682,107.409011703456,140.30930042228,126.96631707944,123.960455266974,184.316226266208,125.817373734679,104.37104699165,203.686213764083,191.608208483767,159.152540715018,163.409452669157,134.90629886902,112.403983873304,192.94839803117,165.92693923517,142.025242169293,251.907043421253,255.459505552571,216.735285645875,237.822787434622,185.501201588118,185.407766481722,269.604382685955,281.423071446805,277.778723052026,176.627811675491,170.003431404986,124.883585705442,193.727840842678,224.281080316427,179.750636066422,88.9384755373275,102.900481183081,91.4111694416519,47.4026823438209,45.8039523166594,71.0407093201094,61.8477653918509,76.9807540760479,72.7003331983243,0,0,0,0.853460445133014,0,0,0,0,0,3.52342313622563,0.764546456250458,3.96513985737078,23.5413596452245,3.16060901730092,6.29471264364266,2.75107533924415,1.64481199199607,0,0,0,0,0,0,0,0,0,0.130059347559878,0,1.10540007114339,0,0,0.267540828089713,7.31748666634838,0,0,0,0.506039384039006,0.318565414324097,0,0,3.312652619711,0.511946444617674,1.24930726552346,1.4206635122641,0.821127996921047,0.201606743224732,0,0.724122019413995,26.8187552945358,9.38981203585091,12.6583936225095,12.6503703334598,6.51739283826656,13.4707262633566,20.6774346233286,17.5188553308949,4.53767122387526,6.43015252641436,9.83749599763012,8.77559805834675,0.364295288292542,0,18.8237488319716,23.6816442727003,18.6141144726411,8.34717185068697,6.86393892936153,7.80060752792086,23.4539640692712,23.2263340678654,16.3156035755569,14.1326985481002,29.3649605346934,49.7963655911522,16.510602356408,14.9881720318211,18.4998456597089,24.0998841190563,20.1414658554573,30.4108842287405,8.29810995663776,13.6035339727971,42.1273812898515,32.415801367121,30.0869359319068,34.23389006693,10.7321646226118,29.427235446612,26.0146476381178,1.31780417436063,0,0,8.94549513051573,0.759783069987479,5.95841313659485,3.15520282823695,4.61068896857864,7.8494864019923,59.7794376086348,3.7000132262574,23.0296166195827,9.0256150286691,16.6731141175728,9.53551794163068,10.37116664064,7.26396438684769,24.6606460695953,13.6913237170668,14.9448680551801,16.5582643087708,21.8528474896978,22.050776652253,17.3531045566659,10.3180826541885,26.864703105699,0,2.47266929278557,3.64064544775211,0,32.993878334997,17.8919483416909,18.2862316219561,7.46261955497424,3.98434134538726,1.05166641234618,7.71338845488143,17.4007946618196,13.0270007179326,19.2858030055201,20.4061945337394,16.900614795104,13.912589162464,10.9808945235638,31.2236214646343,19.0002160064337,30.0396191350496,21.7237760795826,9.05217918185347,49.3463333598094,36.8752679513163,7.29110546935097,0,0,0,1.09776335516636,0.795178609928912,1.62671520017326,2.07322110030741,2.01856680700503,0.72995471815166,0,7.07565032012174,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,2.21446636387394,2.80483547606892,0,0,0,6.87979051674338,7.68026878685825,0,0.122988438543114,16.8136454092555,0.109750285408626,0,2.21163739305588,0.370353780634118,3.25808305310325,7.27954349695705,14.4331342025273,7.41954591840492,8.45342598497916,11.8380487164081,8.7967247389556,18.454652766756,0,0,94.0548963253858,40.4827378690881,73.4237941706318,0,0,0.850650583454319,0,0,0.766765358330422,0,0,0.621984346622316,0.576479813667846,0.12624243342638,7.04826626643076,7.25778008560728,14.0660936652056,5.13217338068116,16.7608813106417,6.9078903304101,16.0062802273124,23.8839209655618,20.0541631663309,41.3627932030158,0,14.3062578340753,11.834238535784,0,0,1.28603687131071,2.83698264046557,1.3321108950805,0.714889968290738,0,0,12.0522388188682,0.355391948742546,0,2.71295439353627,1.74306691720059,1.79951384127703,42.5683232244167,66.8001931604728,73.7918788190611,4.0736225433569,2.29723871668228,0,14.3333493600903,0,0,0,8.27529192848094,0.646882724578552,6.28880877770767,9.90969034467607,16.9181810014908,12.3726210044431,9.71594338939223,11.4828975297569,0,0,0.414415513436035,30.4274899463467,12.5042630264919,24.4138521329762,0.623912584592421,0.713715955188647,0,0.234282829985426,4.21324539618807,2.27407504055985,9.31257641632544,1.99267679560631,7.92787424729324,15.6390506042549,2.93701736194111,3.0882908142977,45.902501799281,38.1814135448952,37.0344625577952,0.909382714338778,3.32870879020994,7.86214762657169,29.2767213226157,44.0435863336739,17.4009258548506,29.7282826273226,15.3512174720011,13.6725832972066,11.8734453155993,28.9914224348992,16.8683639047471,38.8461447945317,11.9428518712233,35.0955342949077,0.241718899183244,0,0,0.229628896329213,0,0,2.70719767744447,14.4018680385256,5.49044838423799,1.46139224653261,13.1939536116095,5.68666920354483,12.5869341904622,14.6822822949455,16.9649977959318,1.89662506280697,2.00675909541941,8.6657932835313,1.66215201785745,6.26849313222099,0,0,15.130557381867,10.4964686623906,5.85681110395745,11.7466753278403,0.732555718546747,1.07262349896764,2.29706215198469,0.650060246036521,0,13.8239127157734,18.4858340537573,20.4159887385752,21.2268321626177,29.3257268490387,20.1573204540778,28.1247870473133,15.6696382738258,0,0.192190067365106,0,0,2.78907329578371,3.1481234683064,1.3940745403212,4.92853728281742,8.51689648507235,2.60979897622522,2.03856641014312,0.143124886741991,27.5397193326154,0.949138274156178,2.09693213316207,3.58256907835867,9.84259672478017,17.5011786359265,0,4.8565563547495,4.94166653524899,4.71249609382746,7.68293429978601,1.58510321173008,30.3306088492066,1.95053495635836,2.92456187557541,0,0,0,13.5609739944291,6.06501877900737,0,3.06915619677634,9.83918408253369,15.7414740491192,0,1.8589409885985,2.81695602532241,0.573645408816206,0.294747123039363,0,3.90237170477658,6.33322905892992,43.1376309777471,7.96893664908002,12.5976499288194,0,1.34060455107157,0,12.9918445071955,0,0,0,0,5.07447609232169,4.58782324285425,7.40541343326411,5.24109906007136,4.11362273086194,5.18778648954174,5.94034580961926,3.96562588147135,0,0.962479855263359,0,0,0.28853842595289,0,0,0,0,0,0,0.280797178113459,0,18.4882277012167,0,0,46.2493656298655,51.055325919335,73.2455528827361,0,1.53620382154229,0.671028323677248,0.834245708559542,7.62013572067957,0,0,0,0,0,0,33.110848515448,0,0,0,0.71623345421307,8.01804638248124,0,24.8536911941574,20.1157265467033,6.12197877625982,0,0,13.3496152128217,11.0513566212459,0,0,0,0.622079175323615,0,0,38.3679277670154,16.4734487413679,11.974154617347,0,7.75466196876175,29.2219509209831,1.99613798001194,0,0,18.8499889613046,0,0,4.49136595359079,3.79217710565611,7.29011533458136,8.16037476186474,21.2577932595321,15.1951512668014,22.8872604475625,24.2168579249382,20.3927857077948,29.3976432186323,0,0,13.6201957551721,37.1451102061224,0,0,0.54323685961004,5.74202087517455,1.00757352742049,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,7.57360239097319,5.97157158647103,27.5103025605385,16.4978139132079,0,0,0,10.4471756120049,11.236087062183,21.7865934524565,0,0,0,5.91876604274086,12.0990716048664,11.9368377035891,70.958528922792,15.9342824579362,17.7306807289293,0,0,0,0,0,0,0,0,0,28.1309935869669,0,0,0,0,9.40793459937668,0,16.9485555585399,28.6417622511709,10.5318744202585,26.4006019136014,0,0,10.4591967422283,0,0,0,0,0,13.0465162343704,0,0,0,0,50.2774026428643,10.2071449080664,14.1012540258753,30.6591811360734,0,0,16.7569440763353,7.33313356837388,63.8906991873364,3.19486400798386,8.15529491459485,21.2012884569779,14.1757126946992,4.32359860250884,0,0,0,0,0,0,23.8568906942791,17.2978325761701,1.28602518772015,0.412618309791701,0.415440338029185,24.297180287562,5.41661368190565,26.3653075895827,0,7.09251365692784,12.1694644473196,19.4304619195708,73.3285217871335,0,20.0114691384543,11.9176554665778,0,0,0,0,14.3676229874985,0.656740165994712,15.5053099824734,18.6964951008207,9.08623848804111,6.62534444561107,23.5294980578022,18.777029447462,0.171086837884329,0,19.8624587375912,10.375484136578,15.7410841031934,32.2507914177768,0,0,0,15.2324984943453,17.7989824756117,18.0743890290442,8.85256102916472,3.92635240625586,26.5820453990096,29.4083298413731,29.545059646734,14.9086390879419,23.0732427196653,20.243427358891,7.05578038174777,0,4.24617529116614,20.2680386816927,0,4.21501415226193,5.21715702998971,29.8509605773748,33.4210033081531,38.2816044436803,0.757612021100357,4.77979013329893,10.6777346591584,16.7053249929754,14.6693996050342,25.0253892938277,39.9208904972012,6.21257391938439,3.59842489730884,7.76314784381297,1.24411862352257,8.50693486585583,0,0.751288044986092,0.761610424337591,2.84809513243263,0.363697318405119,0.751873899297419,3.71227007902795,0,0,29.1886349405374,35.6954458091874,1.26184898228651,21.3808011752107,14.1531450307451,0,0,4.63044948647668,0,15.2225514919264,0,0,10.9547270486446,0.964570191354574,1.52048196587765,6.14979644611072,20.0349598204095,0,28.75775471956,12.8607803833996,18.2024831229307,38.9285638328909,0,0,0,0,27.3130828017001,0,0,33.1390710453313,0,3.73246356019784,14.324169586009,4.63646689005732,0,0,0,2.76347396132188,0,5.02780426175919,18.1262479872449,0,4.80342448971282,21.8659085088224,0,20.1037474551918,34.0071783181404,28.4148269121729,38.1516437487804,12.0994414186425,29.5993040546853,23.4139686166184,5.71077681036618,0,0.943757786781923,0,0,1.1441462864015,43.4926753417863,5.96748666348824,13.6130694312156,13.9176497405429,0.781514011233092,0,82.7048183425989,0,35.3221567554204,27.3377334514847,31.0030194751776,31.7713209071473,13.1273954164373,2.19303106742873,8.435590032618,26.5565578983027,0,41.7847431985064,49.7699908883859,15.7811057101524,22.7662191351298,12.2409270824442,0,0,56.4148783707703,26.4406549722653,0,2.66955364540966,14.1287567130925,9.74116657479212,0,16.4368569691709,0.215927591218621,0,14.0094026586246,0,0,2.26015753993353,0.801711364730253,0,0,0,2.58136415292167,0,0,4.65725755210022,0,0,0,0,0,0,3.88457302312737,15.0914326078683,22.0364741954258,15.5427517778925,10.2933363923326,0,1.78380136166353,0,5.2771448037806,0,6.79132591349913,5.46398901259893,0,9.80593287015622,0,22.5754737182187,25.8430368284565,18.5968520136696,18.1822012715964,44.0784575325513,18.3060401844959,0,0,0,0,10.2247094354512,6.42220996766357,8.45703540593563,31.8698555630233,26.1087322333112,13.9632220908921,12.6966441723696,13.0198256358363,3.69740502905135,9.51778436672336,0,0.109265571963696,9.88248307889208,0.203977659483963,0,0,0,14.7768461525567,7.77095977452918,22.387574865387,13.3428564661845,10.2352311312471,11.903221573187,4.58581259835643,11.2975980018461,22.3142406535421,7.0648345688763,5.45716410187192,9.14410341167238,12.6626321401554,7.13931761954628,22.377328082515,18.9616403231228,0,0,5.7921684686082,0,18.7712753922763,13.3243174159324,16.6827433109453,27.296027741606,21.7375697078308,0 | |||
|short_description=p1@EPB41L3 | |||
}} |
Revision as of 18:27, 20 January 2014
Short description: | p1@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPB41L3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000540638_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | A8K968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.91e-33 | 48 |
phagocyte | 5.91e-33 | 48 |
monopoietic cell | 9.03e-31 | 59 |
monocyte | 9.03e-31 | 59 |
monoblast | 9.03e-31 | 59 |
promonocyte | 9.03e-31 | 59 |
macrophage dendritic cell progenitor | 1.10e-30 | 61 |
classical monocyte | 2.32e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-29 | 42 |
granulocyte monocyte progenitor cell | 7.67e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.87e-23 | 66 |
myeloid leukocyte | 8.79e-23 | 72 |
myeloid cell | 8.03e-12 | 108 |
common myeloid progenitor | 8.03e-12 | 108 |
meso-epithelial cell | 5.55e-08 | 45 |
endothelial cell | 6.42e-08 | 36 |
endothelial cell of vascular tree | 3.78e-07 | 24 |
intermediate monocyte | 4.69e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.69e-07 | 9 |