FFCP PHASE1:Hg19::chr17:45056606..45056625,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=388394|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32422|TSSclassifier=S|UniProt=Q8N4K4|association_with_transcript=0bp_to_ENST00000322329,NM_203400,uc002ilb.2_5end|coexpression_cluster_id=C1782|description=CAGE_peak_1_at_RPRML_5end|id=chr17:45056606..45056625,-|ontology_enrichment_celltype=CL:0002319!1.86e-08!25;CL:0000540!4.55e-08!6;CL:0000031!4.55e-08!6;CL:0000404!4.55e-08!6;CL:0000047!9.84e-08!8|ontology_enrichment_celltype_v019=CL:0000540;1.03e-15;6!CL:0000404;1.03e-15;6|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-16,6;CL:0000031,6.36e-16,6;CL:0000404,6.36e-16,6;CL:0000047,9.53e-16,8|ontology_enrichment_development_v019=CL:0000031;1.03e-15;6!UBERON:0006601;4.38e-10;82!UBERON:0010122;1.25e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.51e-46!82;UBERON:0005743!3.67e-45!86;UBERON:0000073!1.59e-43!94;UBERON:0001016!1.59e-43!94;UBERON:0000955!1.37e-40!69;UBERON:0006238!1.37e-40!69;UBERON:0002780!6.28e-34!41;UBERON:0001890!6.28e-34!41;UBERON:0006240!6.28e-34!41;UBERON:0001869!7.62e-34!32;UBERON:0001893!3.18e-33!34;UBERON:0003080!8.16e-33!42;UBERON:0002020!9.00e-33!34;UBERON:0003528!9.00e-33!34;UBERON:0001049!1.88e-32!57;UBERON:0005068!1.88e-32!57;UBERON:0006241!1.88e-32!57;UBERON:0007135!1.88e-32!57;UBERON:0002616!2.95e-32!59;UBERON:0002791!5.37e-32!33;UBERON:0002346!2.04e-29!90;UBERON:0003075!3.80e-29!86;UBERON:0007284!3.80e-29!86;UBERON:0002619!3.89e-27!22;UBERON:0000956!5.27e-25!25;UBERON:0000203!5.27e-25!25;UBERON:0001950!9.55e-25!20;UBERON:0003056!8.79e-24!61;UBERON:0000924!1.07e-23!173;UBERON:0006601!1.07e-23!173;UBERON:0007023!1.52e-23!115;UBERON:0004121!3.72e-23!169;UBERON:0000033!4.92e-21!123;UBERON:0000153!6.56e-20!129;UBERON:0007811!6.56e-20!129;UBERON:0002420!4.25e-10!9;UBERON:0007245!4.25e-10!9;UBERON:0010009!4.25e-10!9;UBERON:0010011!4.25e-10!9;UBERON:0000454!4.25e-10!9;UBERON:0000064!2.49e-09!219;UBERON:0000025!3.37e-09!194;UBERON:0000200!3.70e-09!6;UBERON:0002308!3.79e-09!9;UBERON:0000125!3.79e-09!9;UBERON:0001871!6.58e-09!7;UBERON:0001872!8.25e-08!5;UBERON:0000349!8.95e-08!5;UBERON:0009663!1.07e-07!7;UBERON:0002021!1.08e-07!5;UBERON:0000369!5.20e-07!4;UBERON:0002435!5.20e-07!4;UBERON:0000204!5.20e-07!4;UBERON:0010082!5.20e-07!4|ontology_enrichment_uberon_v019=UBERON:0001869;4.46e-63;32!UBERON:0002791;4.15e-59;32!UBERON:0002619;7.42e-59;22!UBERON:0001893;3.75e-57;34!UBERON:0003528;8.04e-54;34!UBERON:0002020;8.04e-54;34!UBERON:0001950;1.52e-53;20!UBERON:0000956;2.52e-51;25!UBERON:0000203;2.52e-51;25!UBERON:0002780;4.66e-45;41!UBERON:0001890;4.66e-45;41!UBERON:0000073;1.79e-29;53!UBERON:0002616;1.79e-29;53!UBERON:0000955;5.23e-25;68!UBERON:0001017;3.25e-24;75!UBERON:0002420;6.08e-21;9!UBERON:0007245;6.08e-21;9!UBERON:0010009;6.08e-21;9!UBERON:0010011;6.08e-21;9!UBERON:0000454;6.08e-21;9!UBERON:0001016;7.68e-19;83!UBERON:0000200;2.56e-18;6!UBERON:0009663;1.12e-15;7!UBERON:0001871;1.86e-15;6!UBERON:0001872;2.65e-15;5!UBERON:0000349;3.56e-15;5!UBERON:0002021;3.89e-15;5!UBERON:0000369;1.34e-13;4!UBERON:0002435;1.34e-13;4!UBERON:0000204;1.34e-13;4!UBERON:0000125;5.16e-12;9!UBERON:0002308;5.16e-12;9!UBERON:0005383;1.17e-10;3!UBERON:0005382;1.17e-10;3!UBERON:0001870;4.94e-10;3!UBERON:0007023;1.45e-09;114!UBERON:0011216;5.29e-08;132!UBERON:0001873;1.25e-07;2!UBERON:0002702;2.66e-07;2!UBERON:0002771;2.87e-07;2!UBERON:0001876;5.01e-07;2!UBERON:0001954;7.14e-07;2!UBERON:0003022;7.14e-07;2!UBERON:0002421;7.14e-07;2!UBERON:0002600;7.14e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.18e-71,32;UBERON:0001893,1.82e-66,34;UBERON:0002791,6.04e-66,32;UBERON:0001017,2.23e-62,81;UBERON:0002780,3.26e-62,41;UBERON:0001890,3.26e-62,41;UBERON:0003080,3.26e-62,41;UBERON:0006240,3.26e-62,41;UBERON:0003528,1.05e-61,34;UBERON:0002020,1.05e-61,34;UBERON:0002619,6.03e-59,22;UBERON:0001016,8.06e-58,89;UBERON:0001950,1.29e-53,20;UBERON:0000073,1.03e-52,53;UBERON:0002616,1.03e-52,53;UBERON:0000956,2.10e-51,25;UBERON:0000203,2.10e-51,25;UBERON:0000955,2.53e-50,68;UBERON:0006238,2.53e-50,68;UBERON:0001049,1.92e-49,56;UBERON:0005068,1.92e-49,56;UBERON:0006241,1.92e-49,56;UBERON:0007135,1.92e-49,56;UBERON:0003056,6.62e-42,61;UBERON:0003075,2.46e-37,82;UBERON:0007284,2.46e-37,82;UBERON:0002346,3.67e-35,86;UBERON:0004121,5.88e-29,171;UBERON:0000924,5.88e-29,171;UBERON:0006601,5.88e-29,171;UBERON:0010371,1.93e-27,104;UBERON:0007023,2.67e-26,114;UBERON:0010314,4.13e-21,132;UBERON:0002420,5.07e-21,9;UBERON:0007245,5.07e-21,9;UBERON:0010009,5.07e-21,9;UBERON:0010011,5.07e-21,9;UBERON:0000454,5.07e-21,9;UBERON:0011216,1.46e-20,223;UBERON:0000200,2.52e-18,6;UBERON:0009663,1.05e-15,7;UBERON:0001871,1.62e-15,6;UBERON:0001872,2.36e-15,5;UBERON:0000349,2.82e-15,5;UBERON:0002021,4.25e-15,5;UBERON:0000369,1.34e-13,4;UBERON:0002435,1.34e-13,4;UBERON:0000204,1.34e-13,4;UBERON:0010082,1.34e-13,4;UBERON:0000125,4.92e-12,9;UBERON:0002308,4.92e-12,9;UBERON:000002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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=388394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32422 | |||
|TSSclassifier=S | |||
|UniProt=Q8N4K4 | |||
|association_with_transcript=0bp_to_ENST00000322329,NM_203400,uc002ilb.2_5end | |||
|coexpression_cluster_id=C1782 | |||
|description=CAGE_peak_1_at_RPRML_5end | |||
|id=chr17:45056606..45056625,- | |||
|ontology_enrichment_celltype=CL:0002319!1.86e-08!25;CL:0000540!4.55e-08!6;CL:0000031!4.55e-08!6;CL:0000404!4.55e-08!6;CL:0000047!9.84e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.03e-15;6!CL:0000404;1.03e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-16,6;CL:0000031,6.36e-16,6;CL:0000404,6.36e-16,6;CL:0000047,9.53e-16,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.03e-15;6!UBERON:0006601;4.38e-10;82!UBERON:0010122;1.25e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.51e-46!82;UBERON:0005743!3.67e-45!86;UBERON:0000073!1.59e-43!94;UBERON:0001016!1.59e-43!94;UBERON:0000955!1.37e-40!69;UBERON:0006238!1.37e-40!69;UBERON:0002780!6.28e-34!41;UBERON:0001890!6.28e-34!41;UBERON:0006240!6.28e-34!41;UBERON:0001869!7.62e-34!32;UBERON:0001893!3.18e-33!34;UBERON:0003080!8.16e-33!42;UBERON:0002020!9.00e-33!34;UBERON:0003528!9.00e-33!34;UBERON:0001049!1.88e-32!57;UBERON:0005068!1.88e-32!57;UBERON:0006241!1.88e-32!57;UBERON:0007135!1.88e-32!57;UBERON:0002616!2.95e-32!59;UBERON:0002791!5.37e-32!33;UBERON:0002346!2.04e-29!90;UBERON:0003075!3.80e-29!86;UBERON:0007284!3.80e-29!86;UBERON:0002619!3.89e-27!22;UBERON:0000956!5.27e-25!25;UBERON:0000203!5.27e-25!25;UBERON:0001950!9.55e-25!20;UBERON:0003056!8.79e-24!61;UBERON:0000924!1.07e-23!173;UBERON:0006601!1.07e-23!173;UBERON:0007023!1.52e-23!115;UBERON:0004121!3.72e-23!169;UBERON:0000033!4.92e-21!123;UBERON:0000153!6.56e-20!129;UBERON:0007811!6.56e-20!129;UBERON:0002420!4.25e-10!9;UBERON:0007245!4.25e-10!9;UBERON:0010009!4.25e-10!9;UBERON:0010011!4.25e-10!9;UBERON:0000454!4.25e-10!9;UBERON:0000064!2.49e-09!219;UBERON:0000025!3.37e-09!194;UBERON:0000200!3.70e-09!6;UBERON:0002308!3.79e-09!9;UBERON:0000125!3.79e-09!9;UBERON:0001871!6.58e-09!7;UBERON:0001872!8.25e-08!5;UBERON:0000349!8.95e-08!5;UBERON:0009663!1.07e-07!7;UBERON:0002021!1.08e-07!5;UBERON:0000369!5.20e-07!4;UBERON:0002435!5.20e-07!4;UBERON:0000204!5.20e-07!4;UBERON:0010082!5.20e-07!4 | |||
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|short_description=p1@RPRML | |||
}} |
Revision as of 14:07, 11 September 2013
Short description: | p1@RPRML |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPRML_5end |
Coexpression cluster: | C1782_medulloblastoma_putamen_caudate_brain_nucleus_occipital_medial |
Association with transcript: | 0bp_to_ENST00000322329, NM_203400, uc002ilb.2_5end |
EntrezGene: | RPRML |
HGNC: | 32422 |
UniProt: | Q8N4K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.36e-16 | 6 |
neuroblast | 6.36e-16 | 6 |
electrically signaling cell | 6.36e-16 | 6 |
neuronal stem cell | 9.53e-16 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.