FFCP PHASE1:Hg19::chr1:156119798..156119834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H3S1 | |||
|association_with_transcript=0bp_to_ENST00000355014,uc001fnl.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SEMA4A_5end | |||
|id=chr1:156119798..156119834,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.17e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-15;82!UBERON:0010122;3.32e-11;2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.43e-61!34;UBERON:0002020!1.49e-61!34;UBERON:0003528!1.49e-61!34;UBERON:0001049!8.00e-61!57;UBERON:0005068!8.00e-61!57;UBERON:0006241!8.00e-61!57;UBERON:0007135!8.00e-61!57;UBERON:0002791!3.05e-59!33;UBERON:0005743!3.92e-59!86;UBERON:0001869!6.54e-58!32;UBERON:0001017!1.59e-57!82;UBERON:0002780!2.04e-56!41;UBERON:0001890!2.04e-56!41;UBERON:0006240!2.04e-56!41;UBERON:0003080!7.33e-55!42;UBERON:0000073!2.05e-54!94;UBERON:0001016!2.05e-54!94;UBERON:0002616!1.58e-49!59;UBERON:0002619!6.29e-49!22;UBERON:0000955!8.61e-48!69;UBERON:0006238!8.61e-48!69;UBERON:0003075!9.34e-45!86;UBERON:0007284!9.34e-45!86;UBERON:0001950!1.80e-44!20;UBERON:0002346!3.00e-44!90;UBERON:0000956!1.81e-42!25;UBERON:0000203!1.81e-42!25;UBERON:0003056!1.77e-39!61;UBERON:0007023!2.37e-30!115;UBERON:0000033!4.56e-26!123;UBERON:0000924!9.07e-26!173;UBERON:0006601!9.07e-26!173;UBERON:0004121!1.65e-25!169;UBERON:0000153!2.70e-24!129;UBERON:0007811!2.70e-24!129;UBERON:0002420!7.11e-21!9;UBERON:0007245!7.11e-21!9;UBERON:0010009!7.11e-21!9;UBERON:0010011!7.11e-21!9;UBERON:0000454!7.11e-21!9;UBERON:0002308!2.28e-20!9;UBERON:0000125!2.28e-20!9;UBERON:0009663!3.06e-16!7;UBERON:0001871!3.40e-15!7;UBERON:0000200!7.67e-15!6;UBERON:0000349!4.49e-13!5;UBERON:0001872!6.77e-13!5;UBERON:0002021!8.41e-13!5;UBERON:0000369!6.56e-11!4;UBERON:0002435!6.56e-11!4;UBERON:0000204!6.56e-11!4;UBERON:0010082!6.56e-11!4;UBERON:0000025!6.15e-10!194;UBERON:0002298!1.11e-09!8;UBERON:0003076!1.40e-08!15;UBERON:0003057!1.40e-08!15;UBERON:0005383!1.55e-08!3;UBERON:0005382!1.55e-08!3;UBERON:0002771!3.80e-08!3;UBERON:0000988!7.20e-08!3;UBERON:0002240!1.58e-07!3;UBERON:0006331!2.07e-07!3;UBERON:0000064!5.18e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.95e-102;22!UBERON:0001869;5.54e-95;32!UBERON:0003528;4.23e-93;34!UBERON:0002020;4.23e-93;34!UBERON:0001950;1.27e-92;20!UBERON:0000956;8.93e-90;25!UBERON:0000203;8.93e-90;25!UBERON:0002791;9.41e-89;32!UBERON:0001893;3.86e-87;34!UBERON:0002780;1.67e-58;41!UBERON:0001890;1.67e-58;41!UBERON:0000073;1.69e-41;53!UBERON:0002616;1.69e-41;53!UBERON:0000200;1.67e-29;6!UBERON:0000955;4.23e-29;68!UBERON:0001017;1.32e-28;75!UBERON:0001871;3.24e-26;6!UBERON:0000349;1.42e-25;5!UBERON:0002021;2.48e-25;5!UBERON:0001872;3.91e-25;5!UBERON:0001016;2.27e-24;83!UBERON:0000369;4.66e-21;4!UBERON:0002435;4.66e-21;4!UBERON:0000204;4.66e-21;4!UBERON:0002420;2.77e-20;9!UBERON:0007245;2.77e-20;9!UBERON:0010009;2.77e-20;9!UBERON:0010011;2.77e-20;9!UBERON:0000454;2.77e-20;9!UBERON:0000125;1.13e-19;9!UBERON:0002308;1.13e-19;9!UBERON:0005383;3.87e-16;3!UBERON:0005382;3.87e-16;3!UBERON:0001870;9.69e-16;3!UBERON:0000988;7.29e-15;3!UBERON:0009663;4.30e-12;7!UBERON:0001876;2.09e-11;2!UBERON:0001873;3.32e-11;2!UBERON:0002771;5.26e-11;2!UBERON:0001954;5.26e-11;2!UBERON:0003022;5.26e-11;2!UBERON:0002421;5.26e-11;2!UBERON:0002600;5.26e-11;2!UBERON:0007023;8.01e-11;114!UBERON:0002702;8.28e-11;2!UBERON:0002148;1.75e-10;2!UBERON:0006331;1.75e-10;2!UBERON:0009662;1.75e-10;2!UBERON:0011216;2.82e-10;132!UBERON:0002298;1.10e-07;6!UBERON:0010314;3.39e-07;132!UBERON:0002022;8.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.24e-107,34;UBERON:0002020,1.24e-107,34;UBERON:0001869,6.51e-107,32;UBERON:0002619,4.84e-102,22;UBERON:0001893,1.80e-100,34;UBERON:0002791,7.86e-99,32;UBERON:0001950,1.35e-92,20;UBERON:0000956,1.07e-89,25;UBERON:0000203,1.07e-89,25;UBERON:0002780,9.49e-83,41;UBERON:0001890,9.49e-83,41;UBERON:0003080,9.49e-83,41;UBERON:0006240,9.49e-83,41;UBERON:0001049,9.01e-79,56;UBERON:0005068,9.01e-79,56;UBERON:0006241,9.01e-79,56;UBERON:0007135,9.01e-79,56;UBERON:0000073,4.12e-78,53;UBERON:0002616,4.12e-78,53;UBERON:0001017,6.91e-72,81;UBERON:0000955,1.22e-67,68;UBERON:0006238,1.22e-67,68;UBERON:0001016,3.48e-64,89;UBERON:0003056,3.75e-54,61;UBERON:0003075,4.41e-52,82;UBERON:0007284,4.41e-52,82;UBERON:0002346,2.17e-49,86;UBERON:0010371,8.22e-40,104;UBERON:0007023,2.09e-33,114;UBERON:0010314,2.18e-32,132;UBERON:0004121,1.16e-30,171;UBERON:0000924,1.16e-30,171;UBERON:0006601,1.16e-30,171;UBERON:0000200,2.05e-29,6;UBERON:0001871,3.25e-26,6;UBERON:0000349,1.07e-25,5;UBERON:0001872,2.55e-25,5;UBERON:0011216,3.67e-25,223;UBERON:0002021,4.02e-25,5;UBERON:0000369,3.80e-21,4;UBERON:0002435,3.80e-21,4;UBERON:0000204,3.80e-21,4;UBERON:0010082,3.80e-21,4;UBERON:0002420,1.98e-20,9;UBERON:0007245,1.98e-20,9;UBERON:0010009,1.98e-20,9;UBERON:0010011,1.98e-20,9;UBERON:0000454,1.98e-20,9;UBERON:0000125,1.05e-19,9;UBERON:0002308,1.05e-19,9;UBERON:0000025,1.13e-18,192;UBERON:0005383,3.59e-16,3;UBERON:0005382,3.59e-16,3;UBERON:0001870,9.95e-16,3;UBERON:0004111,6.62e-15,240;UBERON:0000988,8.87e-15,3;UBERON:0009663,3.84e-12,7;UBERON:0001876,1.53e-11,2;UBERON:0001873,2.85e-11,2;UBERON:0010122,2.85e-11,2;UBERON:0001954,6.13e-11,2;UBERON:0003022,6.13e-11,2;UBERON:0002421,6.13e-11,2;UBERON:0002600,6.13e-11,2;UBERON:0002771,7.13e-11,2;UBERON:0002702,8.29e-11,2;UBERON:0002148,1.93e-10,2;UBERON:0006331,1.93e-10,2;UBERON:0009662,1.93e-10,2;UBERON:0000483,2.65e-09,306;UBERON:0000119,3.77e-09,309;UBERON:0002298,1.21e-07,6;UBERON:0002022,7.90e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.59035721985782,0.813357600086629,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0.773288812777695,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,3.97659059106519,4.92342957436795,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0.969332746095218,2.59750674853184,5.98841394003583,0,0,0,0,0,0,0,0,0,3.54296554325536,3.49729672013683,0,0,0,3.51016635446356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,4.89716418608784,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,4.55837730882327,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.13267834056624,0,0,0,0,0,7.16844768564691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.71902382265497,0,0,0,0,0,0,10.0781932267952,0.487170393523584,0,0,0,0,0,0,2.65820453990096,3.05065662254908,2.003054891304,0,0.221858103073705,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,4.94565033242738,1.41696576325585,3.03304332208587,3.48697819209284,6.30179240554295,3.25039086581824,4.52131807769183,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,3.71456715401171,2.34323429584154,1.86018116851066,3.99519604221613,6.56369770821863,0,0,0,0,0,0,0,0,0,0,0,1.35939465953663,3.28863867814245,0,0,0,4.55635210756405,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0.594092800654172,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,7.00312348966421,6.54526035510566,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p5@SEMA4A | |||
}} |
Revision as of 21:24, 10 January 2014
Short description: | p5@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000355014, uc001fnl.2_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | Q9H3S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data