FFCP PHASE1:Hg19::chr11:31832862..31832884,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |||
|TSSclassifier=strong | |||
|UniProt=P26367,Q66SS1,F1T0F8 | |||
|association_with_transcript=0bp_to_ENST00000379115,NM_000280,NM_001604,uc001mtf.3,uc001mtg.3,uc001mth.3_5end | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_2_at_PAX6_5end | |||
|id=chr11:31832862..31832884,- | |||
|ontology_enrichment_celltype=CL:0000128!2.63e-08!7;CL:0000126!2.63e-08!7;CL:0000127!2.63e-08!7;CL:0002453!2.63e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;2.17e-12;7!CL:0000126;2.17e-12;7!CL:0000127;2.17e-12;7!CL:0002319;1.29e-10;25!CL:0000306;1.70e-07;4!CL:0002222;1.70e-07;4!CL:0002224;1.70e-07;4!CL:0002605;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.37e-12,7;CL:0000126,2.37e-12,7;CL:0000127,2.37e-12,7;CL:0002453,2.37e-12,7;CL:0002319,1.45e-10,25;CL:0000133,9.97e-09,59;CL:0000306,1.63e-07,4;CL:0002222,1.63e-07,4;CL:0002224,1.63e-07,4;CL:0002605,2.88e-07,3;CL:0000221,6.13e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.16e-13;82!UBERON:0006215;1.80e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.20e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.66e-57!90;UBERON:0001049!1.81e-55!57;UBERON:0005068!1.81e-55!57;UBERON:0006241!1.81e-55!57;UBERON:0007135!1.81e-55!57;UBERON:0003075!1.81e-55!86;UBERON:0007284!1.81e-55!86;UBERON:0005743!2.30e-55!86;UBERON:0000073!1.52e-52!94;UBERON:0001016!1.52e-52!94;UBERON:0001017!9.58e-52!82;UBERON:0002616!8.42e-48!59;UBERON:0003056!1.19e-46!61;UBERON:0000955!2.70e-44!69;UBERON:0006238!2.70e-44!69;UBERON:0002780!3.31e-41!41;UBERON:0001890!3.31e-41!41;UBERON:0006240!3.31e-41!41;UBERON:0003080!7.46e-40!42;UBERON:0001893!2.38e-36!34;UBERON:0002020!3.68e-36!34;UBERON:0003528!3.68e-36!34;UBERON:0002791!1.99e-35!33;UBERON:0001869!2.09e-34!32;UBERON:0000033!1.77e-33!123;UBERON:0000153!1.25e-32!129;UBERON:0007811!1.25e-32!129;UBERON:0000924!4.49e-31!173;UBERON:0006601!4.49e-31!173;UBERON:0004121!1.17e-29!169;UBERON:0000956!5.74e-27!25;UBERON:0000203!5.74e-27!25;UBERON:0002619!1.95e-23!22;UBERON:0001950!4.44e-21!20;UBERON:0007023!1.76e-17!115;UBERON:0003076!3.38e-16!15;UBERON:0003057!3.38e-16!15;UBERON:0004733!3.06e-13!12;UBERON:0002028!3.06e-13!12;UBERON:0007277!3.06e-13!12;UBERON:0004732!6.52e-12!13;UBERON:0007625!3.11e-11!11;UBERON:0002420!5.62e-11!9;UBERON:0007245!5.62e-11!9;UBERON:0010009!5.62e-11!9;UBERON:0010011!5.62e-11!9;UBERON:0000454!5.62e-11!9;UBERON:0002308!1.55e-10!9;UBERON:0000125!1.55e-10!9;UBERON:0002680!3.02e-10!9;UBERON:0001895!3.02e-10!9;UBERON:0010092!3.02e-10!9;UBERON:0000970!8.69e-10!20;UBERON:0002104!4.22e-09!21;UBERON:0000025!4.27e-09!194;UBERON:0000019!7.93e-09!19;UBERON:0000047!7.93e-09!19;UBERON:0004088!7.93e-09!19;UBERON:0003072!7.93e-09!19;UBERON:0003071!7.93e-09!19;UBERON:0004128!7.93e-09!19;UBERON:0009663!8.99e-09!7;UBERON:0000064!2.05e-08!219;UBERON:0000483!3.09e-08!309;UBERON:0000119!6.21e-08!312;UBERON:0000020!6.42e-08!23;UBERON:0000200!8.06e-08!6;UBERON:0001871!8.25e-08!7;UBERON:0002037!1.09e-07!6;UBERON:0006215!1.09e-07!6;UBERON:0001456!1.35e-07!21;UBERON:0001032!2.09e-07!24;UBERON:0004456!2.09e-07!24;UBERON:0000349!3.70e-07!5;UBERON:0002021!7.70e-07!5;UBERON:0002298!8.95e-07!8;UBERON:0001872!8.98e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.84e-50;34!UBERON:0001869;2.27e-49;32!UBERON:0003528;2.68e-49;34!UBERON:0002020;2.68e-49;34!UBERON:0002791;2.76e-49;32!UBERON:0000073;8.82e-48;53!UBERON:0002616;8.82e-48;53!UBERON:0002780;5.29e-47;41!UBERON:0001890;5.29e-47;41!UBERON:0000956;1.06e-42;25!UBERON:0000203;1.06e-42;25!UBERON:0002619;5.26e-37;22!UBERON:0001950;3.28e-33;20!UBERON:0000955;1.54e-32;68!UBERON:0001017;2.81e-32;75!UBERON:0001016;8.68e-28;83!UBERON:0004733;3.06e-20;12!UBERON:0002028;3.06e-20;12!UBERON:0004732;1.95e-18;13!UBERON:0002420;1.35e-16;9!UBERON:0007245;1.35e-16;9!UBERON:0010009;1.35e-16;9!UBERON:0010011;1.35e-16;9!UBERON:0000454;1.35e-16;9!UBERON:0000125;7.71e-16;9!UBERON:0002308;7.71e-16;9!UBERON:0002680;1.97e-15;9!UBERON:0001895;1.97e-15;9!UBERON:0007625;2.08e-14;11!UBERON:0009663;4.51e-13;7!UBERON:0000970;2.38e-12;20!UBERON:0002104;1.32e-11;21!UBERON:0000200;1.39e-11;6!UBERON:0002037;2.07e-11;6!UBERON:0000019;6.57e-11;19!UBERON:0000047;6.57e-11;19!UBERON:0004088;6.57e-11;19!UBERON:0010230;6.57e-11;19!UBERON:0000349;1.59e-10;5!UBERON:0002298;1.64e-10;6!UBERON:0000020;2.57e-10;23!UBERON:0011216;3.99e-10;132!UBERON:0002021;4.95e-10;5!UBERON:0001871;5.09e-10;6!UBERON:0001872;6.15e-10;5!UBERON:0001032;9.37e-10;24!UBERON:0004456;9.37e-10;24!UBERON:0001456;1.34e-09;21!UBERON:0001894;1.56e-09;7!UBERON:0010314;1.65e-09;132!UBERON:0007023;5.33e-09;114!UBERON:0001801;9.00e-09;14!UBERON:0000369;1.31e-08;4!UBERON:0002435;1.31e-08;4!UBERON:0000204;1.31e-08;4!UBERON:0002784;3.11e-08;4!UBERON:0000488;1.09e-07;4!UBERON:0010077;1.70e-07;4!UBERON:0005389;1.70e-07;4!UBERON:0000484;1.70e-07;4!UBERON:0000965;1.70e-07;4!UBERON:0001803;1.70e-07;4!UBERON:0005383;4.78e-07;3!UBERON:0005382;4.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.87e-91,56;UBERON:0005068,3.87e-91,56;UBERON:0006241,3.87e-91,56;UBERON:0007135,3.87e-91,56;UBERON:0003075,1.98e-88,82;UBERON:0007284,1.98e-88,82;UBERON:0000073,5.81e-86,53;UBERON:0002616,5.81e-86,53;UBERON:0001017,2.73e-84,81;UBERON:0002346,2.03e-83,86;UBERON:0001016,4.61e-79,89;UBERON:0000955,2.31e-73,68;UBERON:0006238,2.31e-73,68;UBERON:0003056,1.52e-71,61;UBERON:0010371,5.46e-70,104;UBERON:0002780,6.33e-66,41;UBERON:0001890,6.33e-66,41;UBERON:0003080,6.33e-66,41;UBERON:0006240,6.33e-66,41;UBERON:0001893,9.38e-58,34;UBERON:0003528,1.90e-57,34;UBERON:0002020,1.90e-57,34;UBERON:0001869,1.26e-54,32;UBERON:0002791,1.76e-54,32;UBERON:0004121,1.72e-52,171;UBERON:0000924,1.72e-52,171;UBERON:0006601,1.72e-52,171;UBERON:0010314,2.11e-49,132;UBERON:0000956,1.19e-42,25;UBERON:0000203,1.19e-42,25;UBERON:0002619,5.73e-37,22;UBERON:0001950,3.56e-33,20;UBERON:0011216,2.98e-27,223;UBERON:0007023,3.57e-27,114;UBERON:0003076,5.51e-25,15;UBERON:0003057,5.51e-25,15;UBERON:0004733,3.04e-20,12;UBERON:0002028,3.04e-20,12;UBERON:0007277,3.04e-20,12;UBERON:0004732,1.94e-18,13;UBERON:0000025,6.78e-17,192;UBERON:0002420,1.28e-16,9;UBERON:0007245,1.28e-16,9;UBERON:0010009,1.28e-16,9;UBERON:0010011,1.28e-16,9;UBERON:0000454,1.28e-16,9;UBERON:0000125,6.50e-16,9;UBERON:0002308,6.50e-16,9;UBERON:0002680,1.89e-15,9;UBERON:0001895,1.89e-15,9;UBERON:0010092,1.89e-15,9;UBERON:0007625,1.91e-14,11;UBERON:0000483,2.00e-14,306;UBERON:0000119,4.23e-14,309;UBERON:0009663,4.28e-13,7;UBERON:0000970,1.36e-11,21;UBERON:0002104,1.36e-11,21;UBERON:0000200,1.41e-11,6;UBERON:0002037,2.29e-11,6;UBERON:0006215,2.29e-11,6;UBERON:0004111,4.46e-11,240;UBERON:0002298,1.48e-10,6;UBERON:0000349,1.61e-10,5;UBERON:0000019,3.28e-10,20;UBERON:0000047,3.28e-10,20;UBERON:0010312,3.28e-10,20;UBERON:0004088,3.28e-10,20;UBERON:0010230,3.28e-10,20;UBERON:0003072,3.28e-10,20;UBERON:0004128,3.28e-10,20;UBERON:0003071,3.28e-10,20;UBERON:0001871,5.01e-10,6;UBERON:0002021,5.15e-10,5;UBERON:0001872,6.57e-10,5;UBERON:0000020,9.58e-10,24;UBERON:0001032,9.58e-10,24;UBERON:0004456,9.58e-10,24;UBERON:0001894,1.65e-09,7;UBERON:0006222,1.65e-09,7;UBERON:0001456,5.01e-09,22;UBERON:0001801,9.20e-09,14;UBERON:0000369,1.26e-08,4;UBERON:0002435,1.26e-08,4;UBERON:0000204,1.26e-08,4;UBERON:0010082,1.26e-08,4;UBERON:0002784,3.20e-08,4;UBERON:0000922,3.42e-08,592;UBERON:0000488,1.04e-07,4;UBERON:0010077,1.63e-07,4;UBERON:0005389,1.63e-07,4;UBERON:0000484,1.63e-07,4;UBERON:0002546,1.63e-07,4;UBERON:0000965,1.63e-07,4;UBERON:0001803,1.63e-07,4;UBERON:0003073,1.63e-07,4;UBERON:0005426,1.63e-07,4;UBERON:0000923,4.00e-07,560;UBERON:0010316,4.00e-07,560;UBERON:0005291,4.00e-07,560;UBERON:0006598,4.00e-07,560;UBERON:0010317,4.00e-07,560;UBERON:0002532,4.00e-07,560;UBERON:0005383,4.55e-07,3;UBERON:0005382,4.55e-07,3;UBERON:0002050,6.43e-07,564;UBERON:0005423,7.05e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18611597461079,4.69201589861782,4.07491137921514,28.0511267388436,19.7099172104953,23.0998456854437,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1004565970007,5.32150553910154,10.452339497482,1.57174890597255,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.975789649036763,0.530119073285941,1.97529702878181,5.90868013587612,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,4.80389868835872,0,0,0,0,0,0,4.3299402607582,21.3311945154141,4.69634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8193806893521,29.932166387253,16.2390650683316,14.0713662880853,17.2243462946354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,2.62411716559765,3.25378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,1.13654458722565,0,0,0,11.9297717731956,25.6018337867133,0.667852230137435,0.329607748453519,0.422250816255987,0.19924798825107,0,14.1082338798395,1.32949287252801,0,0,0,0,0,0,0,0,7.75466196876175,7.51421595110995,7.98455192004777,0,0,0,0,0,0.236387681767936,4.13692047889758,0.291604613383254,26.738249219727,34.5439140467397,15.677537021303,68.6617813426875,119.646759245585,21.8705238025625,9.21418668046685,0,0,0,0,0,0.179515288819544,0.434589487688032,0,0,0,0,0,0,0,0,0,0.569261198172555,0,0.632994193584081,0,0,0,0,0.0884575645033392,0,6.8199859596543,1.72989514525104,2.29728288912002,13.9520345270001,0,11.9474867319923,0,0.391329237864179,0.971121518136371,0,0,14.385419796633,0.063186579628488,1.65355761355942,1.24425829676697,0,0,0,0,0.284609546029793,0,0.694238953340524,0,0,0,2.0638323896594,0.387025325156341,1.0232504392066,0.492692742319255,0,0.0882561266915003,20.3382666702479,0,0,6.90087675919078,0.391102765469606,0,0,0,0.432271251462318,13.4007817514121,0.343189995723929,0.14405479798815,0,0,0,0,0,0,9.60672461935663,9.99409265911549,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,18.290282865614,37.5921400867949,0,0,0,0,0,8.6264370454395,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,4.7892076624995,0,0,0.113312091520126,0,0,6.98127964352373,4.89260626447953,0,0.704815022316672,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,12.4049545195378,9.39602239745116,29.6702505774405,10.3213655224213,17.7486482458964,5.21609784707621,0,0,0,0,0.235265819698172,7.02502358710322,1.1593682288866,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,1.04397716786085,0,0.231522474323834,0,0,0,0,1.06013487567529,0,0.337884881306145,0.256241518587947,0,0,29.8638222087738,0,0,0,1.63804924423206,0,0,0,0.533458648470704,0,0,1.28874165176289,0.139879507719444,0.622077260032973,0,0.539124056983409,1.88719130227076,0,0,0.850299680406731,0.619678821295011,6.14509409770568,0,0,0,0,0,8.60671616292558,12.7526918693026,26.8184883216014,7.38418911266718,21.426094178846,6.08583821685117,12.1106734223888,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,5.60561952332676,14.0594057750493,23.3556080046338,7.29281817229928,16.9562190795648,0,0,0.703484977438482,0,11.7854403893223,7.73452561103295,0,5.00856820972855,0,0,0,2.9906682509806,5.26182188502793,0,0.778619813244484,0,12.8834783731122,0,0,0.215927591218621,0,16.010745895571,0,0.348724276104376,7.82362225361607,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,8.7538341071002,140.325707117531,0.67767649223376,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0.707029641304878,8.2449556188277,12.4759488137376,7.6078030965012,0,0,0.0644578879735772,0,0,0,0,0,0,3.01013124618048,3.62874593044325,5.30333623489135,8.72701380680755,4.2322147241232,0,0,0,1.26166424835079,0,0.253397002022874,0,0.801652215796681,0.0918948995348449,0,0,0,8.29169439458779,23.1689910730645,0.213233981900981,0,0,0.248298857183432,0.560659312903067,0,0,0,0,0,0,0,1.22104902916462,0.426909383510862,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p2@PAX6 | |||
}} |
Revision as of 07:05, 11 January 2014
Short description: | p2@PAX6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | 0bp_to_ENST00000379115, NM_000280, NM_001604, uc001mtf.3, uc001mtg.3, uc001mth.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367Q66SS1F1T0F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.37e-12 | 7 |
macroglial cell | 2.37e-12 | 7 |
astrocyte | 2.37e-12 | 7 |
oligodendrocyte precursor cell | 2.37e-12 | 7 |
neural cell | 1.45e-10 | 25 |
neurectodermal cell | 9.97e-09 | 59 |
crystallin accumulating cell | 1.63e-07 | 4 |
vertebrate lens cell | 1.63e-07 | 4 |
lens epithelial cell | 1.63e-07 | 4 |
astrocyte of the cerebral cortex | 2.88e-07 | 3 |
ectodermal cell | 6.13e-07 | 72 |