FFCP PHASE1:Hg19::chr13:36705564..36705583,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2700 | |||
|TSSclassifier=strong | |||
|UniProt=O15075 | |||
|association_with_transcript=-50bp_to_NM_004734_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_DCLK1_5end | |||
|id=chr13:36705564..36705583,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.63e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.96e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.38e-43!86;UBERON:0001017!1.04e-42!82;UBERON:0000073!5.18e-41!94;UBERON:0001016!5.18e-41!94;UBERON:0000955!4.70e-36!69;UBERON:0006238!4.70e-36!69;UBERON:0001049!5.77e-36!57;UBERON:0005068!5.77e-36!57;UBERON:0006241!5.77e-36!57;UBERON:0007135!5.77e-36!57;UBERON:0002616!7.26e-36!59;UBERON:0003075!6.70e-31!86;UBERON:0007284!6.70e-31!86;UBERON:0007023!4.21e-29!115;UBERON:0002346!3.73e-28!90;UBERON:0003080!9.73e-28!42;UBERON:0002780!3.75e-27!41;UBERON:0001890!3.75e-27!41;UBERON:0006240!3.75e-27!41;UBERON:0000033!1.52e-25!123;UBERON:0000153!2.81e-25!129;UBERON:0007811!2.81e-25!129;UBERON:0004121!1.01e-23!169;UBERON:0002020!1.48e-23!34;UBERON:0003528!1.48e-23!34;UBERON:0001893!2.85e-23!34;UBERON:0003056!4.76e-23!61;UBERON:0002791!1.52e-22!33;UBERON:0000924!2.90e-22!173;UBERON:0006601!2.90e-22!173;UBERON:0001869!2.92e-22!32;UBERON:0000956!1.14e-19!25;UBERON:0000203!1.14e-19!25;UBERON:0002619!3.48e-18!22;UBERON:0001950!1.76e-16!20;UBERON:0000483!2.16e-14!309;UBERON:0000119!3.81e-14!312;UBERON:0000025!5.48e-14!194;UBERON:0000475!2.30e-13!365;UBERON:0000477!5.28e-13!286;UBERON:0004111!9.35e-12!241;UBERON:0000481!2.28e-10!347;UBERON:0003076!2.89e-09!15;UBERON:0003057!2.89e-09!15;UBERON:0000922!5.03e-09!612;UBERON:0000468!7.91e-09!659;UBERON:0002050!7.13e-08!605;UBERON:0005423!7.13e-08!605;UBERON:0000923!1.39e-07!604;UBERON:0005291!1.39e-07!604;UBERON:0006598!1.39e-07!604;UBERON:0002532!1.39e-07!604;UBERON:0000467!2.92e-07!625;UBERON:0000480!3.77e-07!626;UBERON:0004733!5.40e-07!12;UBERON:0002028!5.40e-07!12;UBERON:0007277!5.40e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.71e-35;25!UBERON:0000203;8.71e-35;25!UBERON:0001893;2.08e-34;34!UBERON:0002619;6.14e-34;22!UBERON:0003528;6.48e-34;34!UBERON:0002020;6.48e-34;34!UBERON:0001869;7.41e-34;32!UBERON:0002791;1.11e-33;32!UBERON:0002780;2.26e-32;41!UBERON:0001890;2.26e-32;41!UBERON:0000073;4.86e-31;53!UBERON:0002616;4.86e-31;53!UBERON:0001950;1.02e-30;20!UBERON:0001017;2.55e-23;75!UBERON:0000955;5.38e-21;68!UBERON:0001016;1.76e-18;83!UBERON:0001134;3.07e-11;16!UBERON:0002036;3.07e-11;16!UBERON:0000200;2.99e-10;6!UBERON:0002021;9.84e-10;5!UBERON:0001871;3.95e-09;6!UBERON:0001872;3.96e-09;5!UBERON:0000349;4.12e-09;5!UBERON:0011216;2.22e-08;132!UBERON:0002420;4.25e-08;9!UBERON:0007245;4.25e-08;9!UBERON:0010009;4.25e-08;9!UBERON:0010011;4.25e-08;9!UBERON:0000454;4.25e-08;9!UBERON:0000125;8.61e-08;9!UBERON:0002308;8.61e-08;9!UBERON:0004733;1.11e-07;12!UBERON:0002028;1.11e-07;12!UBERON:0001894;3.20e-07;7!UBERON:0002298;3.89e-07;6!UBERON:0004732;5.81e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.44e-63,81;UBERON:0001016,8.67e-61,89;UBERON:0001049,4.58e-57,56;UBERON:0005068,4.58e-57,56;UBERON:0006241,4.58e-57,56;UBERON:0007135,4.58e-57,56;UBERON:0000955,1.17e-53,68;UBERON:0006238,1.17e-53,68;UBERON:0000073,2.18e-52,53;UBERON:0002616,2.18e-52,53;UBERON:0002780,1.49e-46,41;UBERON:0001890,1.49e-46,41;UBERON:0003080,1.49e-46,41;UBERON:0006240,1.49e-46,41;UBERON:0003075,2.07e-44,82;UBERON:0007284,2.07e-44,82;UBERON:0002346,1.52e-41,86;UBERON:0003528,4.31e-41,34;UBERON:0002020,4.31e-41,34;UBERON:0001893,1.47e-40,34;UBERON:0001869,1.40e-38,32;UBERON:0002791,3.47e-38,32;UBERON:0000956,3.90e-35,25;UBERON:0000203,3.90e-35,25;UBERON:0002619,1.90e-34,22;UBERON:0003056,1.93e-34,61;UBERON:0010371,2.07e-31,104;UBERON:0001950,3.99e-31,20;UBERON:0004121,1.34e-29,171;UBERON:0000924,1.34e-29,171;UBERON:0006601,1.34e-29,171;UBERON:0010314,5.32e-28,132;UBERON:0007023,6.05e-23,114;UBERON:0011216,1.07e-20,223;UBERON:0000025,4.75e-13,192;UBERON:0000483,8.39e-12,306;UBERON:0003076,1.23e-11,15;UBERON:0003057,1.23e-11,15;UBERON:0000119,1.70e-11,309;UBERON:0000200,2.13e-10,6;UBERON:0002021,8.87e-10,5;UBERON:0000349,2.16e-09,5;UBERON:0001872,2.56e-09,5;UBERON:0001871,3.11e-09,6;UBERON:0004111,6.91e-09,240;UBERON:0002420,3.36e-08,9;UBERON:0007245,3.36e-08,9;UBERON:0010009,3.36e-08,9;UBERON:0010011,3.36e-08,9;UBERON:0000454,3.36e-08,9;UBERON:0002050,7.24e-08,564;UBERON:0000125,7.36e-08,9;UBERON:0002308,7.36e-08,9;UBERON:0004733,1.10e-07,12;UBERON:0002028,1.10e-07,12;UBERON:0007277,1.10e-07,12;UBERON:0000923,1.16e-07,560;UBERON:0010316,1.16e-07,560;UBERON:0005291,1.16e-07,560;UBERON:0006598,1.16e-07,560;UBERON:0010317,1.16e-07,560;UBERON:0002532,1.16e-07,560;UBERON:0001894,2.23e-07,7;UBERON:0006222,2.23e-07,7;UBERON:0000922,3.72e-07,592;UBERON:0004732,5.75e-07,13;UBERON:0002298,5.85e-07,6;UBERON:0005423,7.13e-07,581 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,2.35067065379855,0,0,0,0,0.123766352960047,0,0,0,0,0,1.96993692922861,1.42800483870977,5.01527554364941,3.14859585844162,1.23186982565596,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0,0,0,1.22895262313288,1.33037638477538,0.966182642624386,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.446498641420399,0.44905874525234,0.225222960966644,1.53316637465883,0,0.549605231791222,0,0,0,0,0.379891534993739,0.794455084879313,2.86836620748814,1.77334191099179,1.12135520028461,0,0.24666754841716,0.622422070799533,1.34710672069688,0.490385709340376,1.05950199351452,1.72852777344,0,0,0,0.597794722207204,0,0.161872944368132,0,0,0,0.206651562351531,0,0.741800787835671,0,0,0,0.250237039743928,0,0,0.30648779579902,0.901428353439581,0.453728732640084,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.80823028409406,0,0,0.169560592310488,0,0,0,0.365921118388786,0.530119073285941,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,4.05756417412769,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39695367442772,0,0,3.4214489204541,2.05654985406647,0,5.14487578735041,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,1.30294473717494,0.710783897485092,0,0.602878754119172,0,2.0994328148232,0,0,0,0,0,1.42636905040718,0.144781306667579,1.2328579353023,1.07436577943937,0,0,0,0,1.77866236955724,2.60279707715243,3.09315525111078,3.35032530668698,3.18969375826582,0,0,0,0.24538298343828,0,1.35632511849868,0.831883446123229,0.535286966391485,0.315404830067869,1.63997980989798,2.40756879782175,0,3.10419213877515,0,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.768834895534206,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.813472649219715,0,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0.54941678891006,0.082509499920588,0,0,0,1.06337790121334,2.15668063960502,2.14905144616581,0.275673144969061,2.57808587683857,0.580066775656914,1.19317278382541,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.86079184679834,1.89827654831236,0.190630193923825,0,1.71175595213568,0,0.78494864019923,0.719489830333259,0.54907405947211,0.706874414074119,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0.392996164052485,0.35667105148125,0,1.05553817648832,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,4.97073823883149,4.3607519087259,0.445234820091624,0,0,0.996239941255349,0.552567831062295,0,0,0,1.24415835064723,0,0,0,0.690503839458535,0,0,2.90799823828566,2.78304294485554,1.99613798001194,0.520855522170466,0.699679999969566,1.44999915086959,0,0.762760950878299,0,0,0,0.347249989866585,0.885741385813839,1.80894657938112,0,0.663475559587348,0.886642856860642,3.29078095730959,0,0.139423744278603,1.84680620409113,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,1.21322039365219,4.81546588379273,3.51396668588009,0,0,0,0.789168805698781,0,5.50930970934882,0.505492637027904,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.872901148395775,0,2.25980740780532,0,0,2.84898581801454,0,0.801588202515337,0.85381197895741,0,0,0,0,0,0,0,0,0.104602846312333,0.305994652908965,3.17845648891671,0,2.0535806833799,0,1.28929632425987,0,0.837847203816763,1.60412296808179,0.717873024576814,0.399358000997982,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,3.97614844904652,4.90332262001672,0.160753148465019,0.412618309791701,0,0,0,3.21972650287531,0,0.157611414598396,0.209818352539992,0.105600336519406,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0,1.35974509824151,0,0,2.45637617086946,3.17358244182456,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0,0,4.43034089983493,2.07444650333337,4.256491644021,0.573409195690071,3.10601344303186,2.04918129706565,0.415045904808692,0.249960815924213,0,0.285465333544967,0,0,0.579684114443301,0.74627401443437,0.233713309847224,1.10961172300523,2.08343305802598,2.26411111577318,0.889811221596536,0,1.51230923763239,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0.414706207840855,0.265841714557995,1.04349012362347,0.450772826991655,0.761610424337591,0.813741466409323,0.181848659202559,0.429642228169954,0,0,0.400027764663154,1.71697852591396,0,0,0,0,0.260994291965212,0.453411851024545,0.926089897295336,0,0,0.308801447160972,1.09642024789354,0.530067437837643,0.192914038270915,0.168942440653073,0,0,0,2.90342715918635,0,0,0,2.29326894192489,0.245772908753719,0,0,0.106691729694141,0,0,0.552317850755522,0,0,1.40683808434017,2.91126990771041,0.157265941855896,1.41972529649618,0,0,0,0,0,0,1.60114149657094,1.41070377476274,0,1.79841830270087,4.25089728976755,4.46974805360024,3.28186182785208,5.29350562065608,3.94196339046042,5.32869630585109,0,0,0,0,0,0,0.690359926060101,0.994581110581374,2.1058891937792,0.60511520611056,0,0,0,0,2.4988906308806,3.90539049306924,2.68692835451539,4.24885928299176,4.37579847214576,0.548257766857182,0.496211178389294,0,0.383287282918786,1.07140367175657,0.336283722218824,1.82089681270989,1.36597314810779,0.0887023701626388,0,0,2.24300118823545,2.89400203676536,0,0,0.941917114206168,3.29942738823604,0,2.73947616152849,0.215927591218621,0.47775168788705,0.571812353413251,0,0,0,0.801711364730253,0,0.51215543128185,0.691259661814092,0,0,0,0,0,0.93061915699296,0,0,0,0,0,1.02662806856247,2.3196288626764,0.971421986118279,1.40363678077263,0,0,0,0,0.452888530700021,0.154348316215889,0.437119121007915,0,0.980593287015622,0,2.74831853960923,3.86160320425212,4.226557275834,0,0.563903507879121,0.45120521581504,0,0.892769693028288,0,0,0.730336388246517,0.917458566809082,1.29005624836306,0,3.94350643107305,8.29066311646717,0.5290268405154,0.743990036333503,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0.833565680400634,0,2.48750831837634,1.86179392551411,0.852935927603924,3.09483760902862,0,0.186224142887574,0.33639558774184,0.190941474834495,0.404234377916439,0.217716747896961,1.36893320434112,0.134704106029175,0.143444410785353,3.32660356546013,0.89543595472072,0,1.9307228228694,0,0,1.58913877437726,2.03448089157869,1.33151354837103,1.40891655513718,0 | |||
|short_description=p9@DCLK1 | |||
}} |
Revision as of 17:20, 11 January 2014
Short description: | p9@DCLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DCLK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -50bp_to_NM_004734_5end |
EntrezGene: | DCLK1 |
HGNC: | 2700 |
UniProt: | O15075 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.96e-07 | 9 |