FFCP PHASE1:Hg19::chr16:67918770..67918820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=123904 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29811 | |||
|TSSclassifier=strong | |||
|UniProt=Q496H8 | |||
|association_with_transcript=0bp_to_ENST00000339176,NM_198443,uc002euu.2_5end | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_NRN1L_5end | |||
|id=chr16:67918770..67918820,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.11e-08!7;CL:0000586!1.11e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.11e-18;7!CL:0000586;4.11e-18;7!CL:0002322;2.20e-13;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.52e-18,7;CL:0000586,6.52e-18,7;CL:0002322,2.22e-13,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.03e-14;82!UBERON:0009117;1.95e-08;10!UBERON:0005564;1.95e-08;10!UBERON:0002532;3.73e-07;206!UBERON:0010316;3.73e-07;206 | |||
|ontology_enrichment_disease=DOID:3095!2.43e-09!22;DOID:2994!2.43e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.90e-08;22!DOID:2994;7.90e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,8.04e-08,22;DOID:2994,8.04e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-32!57;UBERON:0005068!1.55e-32!57;UBERON:0006241!1.55e-32!57;UBERON:0007135!1.55e-32!57;UBERON:0001017!1.55e-32!82;UBERON:0005743!1.86e-31!86;UBERON:0000073!2.82e-31!94;UBERON:0001016!2.82e-31!94;UBERON:0002616!8.38e-30!59;UBERON:0000955!1.50e-29!69;UBERON:0006238!1.50e-29!69;UBERON:0002780!2.99e-26!41;UBERON:0001890!2.99e-26!41;UBERON:0006240!2.99e-26!41;UBERON:0003080!2.78e-25!42;UBERON:0007023!2.97e-25!115;UBERON:0003075!6.73e-25!86;UBERON:0007284!6.73e-25!86;UBERON:0002346!1.25e-24!90;UBERON:0002020!5.38e-20!34;UBERON:0003528!5.38e-20!34;UBERON:0003056!6.27e-20!61;UBERON:0001893!8.20e-20!34;UBERON:0002791!4.65e-19!33;UBERON:0001869!4.28e-18!32;UBERON:0000033!1.06e-17!123;UBERON:0000153!1.71e-16!129;UBERON:0007811!1.71e-16!129;UBERON:0000924!1.43e-15!173;UBERON:0006601!1.43e-15!173;UBERON:0004121!1.97e-15!169;UBERON:0002619!2.37e-12!22;UBERON:0000956!3.88e-12!25;UBERON:0000203!3.88e-12!25;UBERON:0001950!7.50e-11!20;UBERON:0000475!2.16e-10!365;UBERON:0000025!2.22e-10!194;UBERON:0002308!4.60e-10!9;UBERON:0000125!4.60e-10!9;UBERON:0002420!8.81e-10!9;UBERON:0007245!8.81e-10!9;UBERON:0010009!8.81e-10!9;UBERON:0010011!8.81e-10!9;UBERON:0000454!8.81e-10!9;UBERON:0000477!7.03e-09!286;UBERON:0003076!2.29e-08!15;UBERON:0003057!2.29e-08!15;UBERON:0001894!3.21e-08!7;UBERON:0006222!3.21e-08!7;UBERON:0009663!3.53e-08!7;UBERON:0004111!3.56e-08!241;UBERON:0000064!5.93e-08!219;UBERON:0000481!8.30e-08!347;UBERON:0000119!6.84e-07!312;UBERON:0000483!7.36e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.03e-32;53!UBERON:0002616;2.03e-32;53!UBERON:0002780;4.69e-31;41!UBERON:0001890;4.69e-31;41!UBERON:0001893;1.37e-26;34!UBERON:0003528;2.99e-26;34!UBERON:0002020;2.99e-26;34!UBERON:0002791;1.06e-24;32!UBERON:0001869;5.68e-24;32!UBERON:0000125;9.36e-21;9!UBERON:0002308;9.36e-21;9!UBERON:0002420;3.58e-20;9!UBERON:0007245;3.58e-20;9!UBERON:0010009;3.58e-20;9!UBERON:0010011;3.58e-20;9!UBERON:0000454;3.58e-20;9!UBERON:0000955;1.01e-19;68!UBERON:0001017;1.12e-18;75!UBERON:0002619;6.21e-18;22!UBERON:0001950;3.93e-17;20!UBERON:0001894;7.05e-17;7!UBERON:0009663;1.46e-16;7!UBERON:0000956;1.95e-15;25!UBERON:0000203;1.95e-15;25!UBERON:0001016;7.57e-15;83!UBERON:0002298;1.53e-13;6!UBERON:0000200;7.32e-13;6!UBERON:0004733;5.79e-11;12!UBERON:0002028;5.79e-11;12!UBERON:0003296;1.03e-10;4!UBERON:0010133;1.03e-10;4!UBERON:0007023;1.04e-10;114!UBERON:0002784;1.38e-10;4!UBERON:0000369;4.45e-10;4!UBERON:0002435;4.45e-10;4!UBERON:0000204;4.45e-10;4!UBERON:0004732;5.18e-10;13!UBERON:0005383;5.72e-08;3!UBERON:0005382;5.72e-08;3!UBERON:0001871;8.58e-08;6!UBERON:0000988;1.10e-07;3!UBERON:0000473;1.19e-07;8!UBERON:0000349;1.32e-07;5!UBERON:0001896;1.61e-07;3!UBERON:0005290;1.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.04e-58,56;UBERON:0005068,5.04e-58,56;UBERON:0006241,5.04e-58,56;UBERON:0007135,5.04e-58,56;UBERON:0000073,1.68e-55,53;UBERON:0002616,1.68e-55,53;UBERON:0001017,1.08e-50,81;UBERON:0000955,2.56e-45,68;UBERON:0006238,2.56e-45,68;UBERON:0002780,3.08e-45,41;UBERON:0001890,3.08e-45,41;UBERON:0003080,3.08e-45,41;UBERON:0006240,3.08e-45,41;UBERON:0001016,1.98e-44,89;UBERON:0003075,7.98e-43,82;UBERON:0007284,7.98e-43,82;UBERON:0002346,2.79e-40,86;UBERON:0007023,4.41e-36,114;UBERON:0003056,2.40e-32,61;UBERON:0003528,9.94e-32,34;UBERON:0002020,9.94e-32,34;UBERON:0001893,2.27e-31,34;UBERON:0010371,2.95e-31,104;UBERON:0002791,6.19e-28,32;UBERON:0001869,9.76e-28,32;UBERON:0010314,8.65e-25,132;UBERON:0000125,4.38e-21,9;UBERON:0002308,4.38e-21,9;UBERON:0002420,1.95e-20,9;UBERON:0007245,1.95e-20,9;UBERON:0010009,1.95e-20,9;UBERON:0010011,1.95e-20,9;UBERON:0000454,1.95e-20,9;UBERON:0004121,1.39e-19,171;UBERON:0000924,1.39e-19,171;UBERON:0006601,1.39e-19,171;UBERON:0011216,3.42e-19,223;UBERON:0000025,3.62e-18,192;UBERON:0002619,4.06e-18,22;UBERON:0001950,2.55e-17,20;UBERON:0001894,7.49e-17,7;UBERON:0006222,7.49e-17,7;UBERON:0009663,9.29e-17,7;UBERON:0000956,1.35e-15,25;UBERON:0000203,1.35e-15,25;UBERON:0002298,6.65e-14,6;UBERON:0003076,1.57e-13,15;UBERON:0003057,1.57e-13,15;UBERON:0000200,4.46e-13,6;UBERON:0004111,1.01e-12,240;UBERON:0004733,3.28e-11,12;UBERON:0002028,3.28e-11,12;UBERON:0007277,3.28e-11,12;UBERON:0002784,1.19e-10,4;UBERON:0003296,1.28e-10,4;UBERON:0010133,1.28e-10,4;UBERON:0000369,2.85e-10,4;UBERON:0002435,2.85e-10,4;UBERON:0000204,2.85e-10,4;UBERON:0010082,2.85e-10,4;UBERON:0004732,3.08e-10,13;UBERON:0000483,1.51e-08,306;UBERON:0000119,2.40e-08,309;UBERON:0005383,3.72e-08,3;UBERON:0005382,3.72e-08,3;UBERON:0000988,6.32e-08,3;UBERON:0001871,7.26e-08,6;UBERON:0000349,1.15e-07,5;UBERON:0001896,1.20e-07,3;UBERON:0005290,1.20e-07,3;UBERON:0010096,1.20e-07,3;UBERON:0000473,1.87e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0,0.339121184620975,0,0,0,13.5390813803851,10.7349112340403,7.66880022938821,4.66474747569167,10.0928340350251,14.964071722109,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.783204629850962,1.37257369524342,0,0,0,0.606255142892519,0,0.907170879989041,0,0,0,0.384417447767103,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.26602474769461,0,0,1.05562704063997,0.398495976502139,0,0,0,0,0,0,0.358042349351218,0,1.38100767891707,0,0,0,2.22643435588443,0,0,0.262379999988587,0,0.227586896570999,0.254253650292766,2.83665218121524,0.344743373241465,0.291604613383254,0.173624994933292,3.54296554325536,1.92954301800653,1.52581736317083,1.43753037910592,0.591095237907095,2.4132393686937,0,0,0.230850775511391,0,17.0617289247165,30.338083810503,75.4012761138736,0,0.732780747214898,2.66517388009317,0,0,0,0.225595660617181,0.392125068635479,0,0.37950746544837,0,0,0,0.706765357169704,0,0,0.0884575645033392,0,0,0,0,2.3590396543237,0,5.3880822516828,0,0.19566461893209,0,0,0,0,0,0.450970258243478,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,9.49119111278236,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0.124252535565433,0.942776138467182,0.407712618220842,0,0.101998217636322,0,6.00420288709789,2.73810757783986,0,0,0,0,0.229160424011684,0,0,0.858452096273142,1.56220020209311,0.873385142327441,0,3.49487848582361,0,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,2.45166131000836,9.96669520483119,18.5678239406266,21.1874572394884,0,0,1.51873891645062,0,0,0,0,0.896436696664224,0,0,2.64836788146173,0,0,0,0.326587360109409,0,0,0,0,0,0,2.97350799631566,2.6446520348538,0,0,1.60181118851542,0.943225830597996,2.07119527673598,0,0,0,0,0,0,0,0,0,1.77213635993397,1.83039397352945,1.6274820991845,3.44045517414043,1.99672292766334,1.36612086471044,0.553394539744923,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0.926404341482917,0,0,0.771656153083659,0.337884881306145,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.436838552768056,0,0.212574920101683,0,0.558644917973244,0,0,15.2108442174239,0.352675943690684,0,2.50493977876192,1.41696576325585,1.27707087245721,0.615349092722265,0,1.24483054435592,1.13032951942296,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,21.4763489474766,0,0,1.2832141077495,0,1.86018116851066,1.45856363445986,0.546974809018219,0,0.496211178389294,0.175871244359621,0,153.21072506119,50.1062746106048,3.03482802118316,1.36597314810779,0.443511850813194,0,0,1.69924332442079,1.57854656550838,0,0.111231401892069,0.39246546425257,4.55635210756405,0,0,0.215927591218621,0,8.64866184537542,6.16253085757634,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,1.1598144313382,0,0,0.3979015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| |||
|short_description=p1@NRN1L | |||
}} |
Revision as of 11:58, 20 January 2014
Short description: | p1@NRN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRN1L_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 0bp_to_ENST00000339176, NM_198443, uc002euu.2_5end |
EntrezGene: | NRN1L |
HGNC: | 29811 |
UniProt: | Q496H8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.52e-18 | 7 |
germ cell | 6.52e-18 | 7 |
embryonic stem cell | 2.22e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.04e-08 | 22 |
germ cell cancer | 8.04e-08 | 22 |